RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 KLF15Q9UIH9 416 aa9.18□□□□□ -0.94
TM9SF3-206ENST00000490192 SALL4Q9UJQ4 1053 aa9.18□□□□□ -0.94
TM9SF3-206ENST00000490192 HCN2Q9UL51 889 aa9.18□□□□□ -0.94
TM9SF3-206ENST00000490192 KCNH4Q9UQ05 1017 aa9.18□□□□□ -0.94
TM9SF3-206ENST00000490192 COL4A3BPQ9Y5P4 624 aa9.18□□□□□ -0.94
TM9SF3-206ENST00000490192 GNB5O14775 395 aa9.17□□□□□ -0.94
TM9SF3-206ENST00000490192 CELA3AP09093 270 aa9.17□□□□□ -0.94
TM9SF3-206ENST00000490192 APOBRQ0VD83 1088 aa9.17□□□□□ -0.94
TM9SF3-206ENST00000490192 SNAP47Q5SQN1 464 aa9.17□□□□□ -0.94
TM9SF3-206ENST00000490192 FCHSD1Q86WN1 690 aa9.17□□□□□ -0.94
TM9SF3-206ENST00000490192 GOLM1Q8NBJ4 401 aa9.17□□□□□ -0.94
TM9SF3-206ENST00000490192 NKD1Q969G9 470 aa9.17□□□□□ -0.94
TM9SF3-206ENST00000490192 TCF12Q99081 682 aa9.17□□□□□ -0.94
TM9SF3-206ENST00000490192 ELOA3CA0A087WX78 387 aaPredicted RBP9.16□□□□□ -0.94
TM9SF3-206ENST00000490192 ELOA3DA6NLF2 546 aaPredicted RBP9.16□□□□□ -0.94
TM9SF3-206ENST00000490192 CHMP4BP1P59074 171 aa9.16□□□□□ -0.94
TM9SF3-206ENST00000490192 SPEM2Q0P670 501 aa9.16□□□□□ -0.94
TM9SF3-206ENST00000490192 CAMK2GQ13555 558 aaPredicted RBP9.16□□□□□ -0.94
TM9SF3-206ENST00000490192 ELOA3BQ3SY89 546 aa9.16□□□□□ -0.94
TM9SF3-206ENST00000490192 PLEKHG4Q58EX7 1191 aa9.16□□□□□ -0.94
TM9SF3-206ENST00000490192 CCDC81Q6ZN84 652 aa9.16□□□□□ -0.94
TM9SF3-206ENST00000490192 KRT25Q7Z3Z0 450 aa9.16□□□□□ -0.94
TM9SF3-206ENST00000490192 ELOA3Q8NG57 546 aa9.16□□□□□ -0.94
TM9SF3-206ENST00000490192 OR13H1Q8NG92 308 aa9.16□□□□□ -0.94
TM9SF3-206ENST00000490192 NOP53Q9NZM5 478 aaKnown RBP9.16□□□□□ -0.94
TM9SF3-206ENST00000490192 SMAD7O15105 426 aaKnown RBP9.15□□□□□ -0.94
TM9SF3-206ENST00000490192 MMP20O60882 483 aa9.15□□□□□ -0.94
TM9SF3-206ENST00000490192 DNAJC6O75061 913 aa9.15□□□□□ -0.94
TM9SF3-206ENST00000490192 SIN3BO75182 1162 aa9.15□□□□□ -0.94
TM9SF3-206ENST00000490192 TARSP26639 723 aaKnown RBP9.15□□□□□ -0.94
TM9SF3-206ENST00000490192 CRKP46108 304 aa9.15□□□□□ -0.94
TM9SF3-206ENST00000490192 LMNB2Q03252 620 aa9.15□□□□□ -0.94
TM9SF3-206ENST00000490192 GRIN2CQ14957 1233 aa9.15□□□□□ -0.94
TM9SF3-206ENST00000490192 LRP10Q7Z4F1 713 aa9.15□□□□□ -0.94
TM9SF3-206ENST00000490192 SHDQ96IW2 340 aa9.15□□□□□ -0.94
TM9SF3-206ENST00000490192 METTL14Q9HCE5 456 aaKnown RBP9.15□□□□□ -0.94
TM9SF3-206ENST00000490192 KCNQ4P56696 695 aa9.14□□□□□ -0.95
TM9SF3-206ENST00000490192 LINC00114Q6XXX2 140 aa9.14□□□□□ -0.95
TM9SF3-206ENST00000490192 CCNJLQ8IV13 435 aa9.14□□□□□ -0.95
TM9SF3-206ENST00000490192 SH3TC2Q8TF17 1288 aa9.14□□□□□ -0.95
TM9SF3-206ENST00000490192 SLC30A3Q99726 388 aa9.14□□□□□ -0.95
TM9SF3-206ENST00000490192 CEP44Q9C0F1 390 aa9.14□□□□□ -0.95
TM9SF3-206ENST00000490192 KANSL2Q9H9L4 492 aa9.14□□□□□ -0.95
TM9SF3-206ENST00000490192 SPC25Q9HBM1 224 aa9.14□□□□□ -0.95
TM9SF3-206ENST00000490192 PCDH12Q9NPG4 1184 aa9.14□□□□□ -0.95
TM9SF3-206ENST00000490192 FANCLQ9NW38 375 aa9.14□□□□□ -0.95
TM9SF3-206ENST00000490192 KLHL42Q9P2K6 505 aa9.14□□□□□ -0.95
TM9SF3-206ENST00000490192 PPT2Q9UMR5 302 aa9.14□□□□□ -0.95
TM9SF3-206ENST00000490192 CDC45O75419 566 aa9.13□□□□□ -0.95
TM9SF3-206ENST00000490192 SEZ6Q53EL9 994 aa9.13□□□□□ -0.95
TM9SF3-206ENST00000490192 TNNI3KQ59H18 835 aa9.13□□□□□ -0.95
TM9SF3-206ENST00000490192 TTBK2Q6IQ55 1244 aa9.13□□□□□ -0.95
TM9SF3-206ENST00000490192 SLITRK4Q8IW52 837 aa9.13□□□□□ -0.95
TM9SF3-206ENST00000490192 OSMRQ99650 979 aa9.13□□□□□ -0.95
TM9SF3-206ENST00000490192 ZKSCAN3Q9BRR0 538 aa9.13□□□□□ -0.95
TM9SF3-206ENST00000490192 ZFYVE1Q9HBF4 777 aa9.13□□□□□ -0.95
TM9SF3-206ENST00000490192 MSTNO14793 375 aa9.12□□□□□ -0.95
TM9SF3-206ENST00000490192 ACPPP15309 386 aa9.12□□□□□ -0.95
TM9SF3-206ENST00000490192 TFE3P19532 575 aaPredicted RBP9.12□□□□□ -0.95
TM9SF3-206ENST00000490192 DGKGP49619 791 aa9.12□□□□□ -0.95
TM9SF3-206ENST00000490192 CCINQ13939 588 aa9.12□□□□□ -0.95
TM9SF3-206ENST00000490192 PLA2G4EQ3MJ16 856 aa9.12□□□□□ -0.95
TM9SF3-206ENST00000490192 AGMOQ6ZNB7 445 aa9.12□□□□□ -0.95
TM9SF3-206ENST00000490192 FAM196AQ6ZSG2 479 aa9.12□□□□□ -0.95
TM9SF3-206ENST00000490192 NCAPG2Q86XI2 1143 aa9.12□□□□□ -0.95
TM9SF3-206ENST00000490192 CELF2-AS1Q8N7Q2 184 aa9.12□□□□□ -0.95
TM9SF3-206ENST00000490192 FAM169BQ8N8A8 192 aa9.12□□□□□ -0.95
TM9SF3-206ENST00000490192 PNMA5Q96PV4 448 aa9.12□□□□□ -0.95
TM9SF3-206ENST00000490192 DNAJC7Q99615 494 aa9.12□□□□□ -0.95
TM9SF3-206ENST00000490192 ENC1O14682 589 aa9.11□□□□□ -0.95
TM9SF3-206ENST00000490192 PPP1R12AO14974 1030 aaPredicted RBP9.11□□□□□ -0.95
TM9SF3-206ENST00000490192 RARAP10276 462 aa9.11□□□□□ -0.95
TM9SF3-206ENST00000490192 GRIA4P48058 902 aa9.11□□□□□ -0.95
TM9SF3-206ENST00000490192 RAB44Q7Z6P3 723 aaPredicted RBP9.11□□□□□ -0.95
TM9SF3-206ENST00000490192 LILRB2Q8N423 598 aa9.11□□□□□ -0.95
TM9SF3-206ENST00000490192 BHMTQ93088 406 aa9.11□□□□□ -0.95
TM9SF3-206ENST00000490192 NECAB3Q96P71 396 aaPredicted RBP9.11□□□□□ -0.95
TM9SF3-206ENST00000490192 GSX2Q9BZM3 304 aa9.11□□□□□ -0.95
TM9SF3-206ENST00000490192 CCDC113Q9H0I3 377 aa9.11□□□□□ -0.95
TM9SF3-206ENST00000490192 SLKQ9H2G2 1235 aaPredicted RBP9.11□□□□□ -0.95
TM9SF3-206ENST00000490192 EFCC1Q9HA90 598 aa9.11□□□□□ -0.95
TM9SF3-206ENST00000490192 MSRB2Q9Y3D2 182 aa9.11□□□□□ -0.95
TM9SF3-206ENST00000490192 ADARB2-AS1A8MUL3 147 aa9.1□□□□□ -0.95
TM9SF3-206ENST00000490192 TLR3O15455 904 aaKnown RBP9.1□□□□□ -0.95
TM9SF3-206ENST00000490192 TRPA1O75762 1119 aa9.1□□□□□ -0.95
TM9SF3-206ENST00000490192 HOXB4P17483 251 aaPredicted RBP9.1□□□□□ -0.95
TM9SF3-206ENST00000490192 EIF6P56537 245 aaKnown RBP9.1□□□□□ -0.95
TM9SF3-206ENST00000490192 SPRED3Q2MJR0 410 aa9.1□□□□□ -0.95
TM9SF3-206ENST00000490192 COL13A1Q5TAT6 717 aaPredicted RBP9.1□□□□□ -0.95
TM9SF3-206ENST00000490192 APPBP2Q92624 585 aa9.1□□□□□ -0.95
TM9SF3-206ENST00000490192 TNFRSF25Q93038 417 aa9.1□□□□□ -0.95
TM9SF3-206ENST00000490192 IGFLR1Q9H665 355 aa9.1□□□□□ -0.95
TM9SF3-206ENST00000490192 ST7Q9NRC1 585 aa9.1□□□□□ -0.95
TM9SF3-206ENST00000490192 DZANK1Q9NVP4 752 aa9.1□□□□□ -0.95
TM9SF3-206ENST00000490192 ZFATQ9P243 1243 aa9.1□□□□□ -0.95
TM9SF3-206ENST00000490192 PRKAB1Q9Y478 270 aa9.1□□□□□ -0.95
TM9SF3-206ENST00000490192 ESYT3A0FGR9 886 aa9.09□□□□□ -0.95
TM9SF3-206ENST00000490192 SPDYE3A6NKU9 549 aa9.09□□□□□ -0.95
TM9SF3-206ENST00000490192 METTL12A8MUP2 240 aa9.09□□□□□ -0.95
TM9SF3-206ENST00000490192 PAGE1O75459 146 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms