RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 CHMP3Q9Y3E7 222 aa13.55□□□□□ -0.24
UBP1-211ENST00000490112 PPP1R12BO60237 982 aaPredicted RBP13.54□□□□□ -0.24
UBP1-211ENST00000490112 KLRK1P26718 216 aa13.54□□□□□ -0.24
UBP1-211ENST00000490112 FOXO4P98177 505 aa13.54□□□□□ -0.24
UBP1-211ENST00000490112 PTPN12Q05209 780 aaKnown RBP13.54□□□□□ -0.24
UBP1-211ENST00000490112 EXOSC9Q06265 439 aaKnown RBP13.54□□□□□ -0.24
UBP1-211ENST00000490112 SUPT20HL1Q3ZLR7 823 aa13.54□□□□□ -0.24
UBP1-211ENST00000490112 TAF7LQ5H9L4 462 aa13.54□□□□□ -0.24
UBP1-211ENST00000490112 BEND3Q5T5X7 828 aa13.54□□□□□ -0.24
UBP1-211ENST00000490112 LDLRAD1Q5T700 205 aa13.54□□□□□ -0.24
UBP1-211ENST00000490112 DEFB129Q9H1M3 183 aa13.54□□□□□ -0.24
UBP1-211ENST00000490112 GRM8O00222 908 aa13.53□□□□□ -0.24
UBP1-211ENST00000490112 TAF5LO75529 589 aa13.53□□□□□ -0.24
UBP1-211ENST00000490112 SLC34A2O95436 690 aa13.53□□□□□ -0.24
UBP1-211ENST00000490112 PDAP1Q13442 181 aaKnown RBP13.53□□□□□ -0.24
UBP1-211ENST00000490112 LMBR1LQ6UX01 489 aa13.53□□□□□ -0.24
UBP1-211ENST00000490112 LDHAL6AQ6ZMR3 332 aa13.53□□□□□ -0.24
UBP1-211ENST00000490112 ZNF296Q8WUU4 475 aaPredicted RBP13.53□□□□□ -0.24
UBP1-211ENST00000490112 SLC10A4Q96EP9 437 aa13.53□□□□□ -0.24
UBP1-211ENST00000490112 KRTAP3-3Q9BYR6 98 aa13.53□□□□□ -0.24
UBP1-211ENST00000490112 KRTAP3-2Q9BYR7 98 aa13.53□□□□□ -0.24
UBP1-211ENST00000490112 C9orf78Q9NZ63 289 aaPredicted RBP13.53□□□□□ -0.24
UBP1-211ENST00000490112 ANGEL1Q9UNK9 670 aaKnown RBP13.53□□□□□ -0.24
UBP1-211ENST00000490112 POTEB3A0JP26 581 aa13.52□□□□□ -0.25
UBP1-211ENST00000490112 FAM205CA6NFA0 338 aa13.52□□□□□ -0.25
UBP1-211ENST00000490112 MANSC4A6NHS7 340 aaPredicted RBP13.52□□□□□ -0.25
UBP1-211ENST00000490112 GPR25O00155 361 aa13.52□□□□□ -0.25
UBP1-211ENST00000490112 ALDH1L1O75891 902 aa13.52□□□□□ -0.25
UBP1-211ENST00000490112 TBC1D8O95759 1140 aa13.52□□□□□ -0.25
UBP1-211ENST00000490112 ZBTB48P10074 688 aaPredicted RBP13.52□□□□□ -0.25
UBP1-211ENST00000490112 MAP3K11Q16584 847 aa13.52□□□□□ -0.25
UBP1-211ENST00000490112 SPRYD7Q5W111 196 aa13.52□□□□□ -0.25
UBP1-211ENST00000490112 POTEBQ6S5H4 581 aa13.52□□□□□ -0.25
UBP1-211ENST00000490112 HELBQ8NG08 1087 aaPredicted RBP13.52□□□□□ -0.25
UBP1-211ENST00000490112 CNNM1Q9NRU3 951 aa13.52□□□□□ -0.25
UBP1-211ENST00000490112 IRS2Q9Y4H2 1338 aa13.52□□□□□ -0.25
UBP1-211ENST00000490112 ECM29Q5VYK3 1845 aa13.51□□□□□ -0.25
UBP1-211ENST00000490112 F6X3S4 739 aa13.51□□□□□ -0.25
UBP1-211ENST00000490112 FKTNO75072 461 aa13.51□□□□□ -0.25
UBP1-211ENST00000490112 SOX10P56693 466 aa13.51□□□□□ -0.25
UBP1-211ENST00000490112 TNFAIP1Q13829 316 aa13.51□□□□□ -0.25
UBP1-211ENST00000490112 PRKG1Q13976 671 aa13.51□□□□□ -0.25
UBP1-211ENST00000490112 UBE4AQ14139 1066 aa13.51□□□□□ -0.25
UBP1-211ENST00000490112 CFAP100Q494V2 611 aa13.51□□□□□ -0.25
UBP1-211ENST00000490112 CERS5Q8N5B7 392 aa13.51□□□□□ -0.25
UBP1-211ENST00000490112 HPS5Q9UPZ3 1129 aa13.51□□□□□ -0.25
UBP1-211ENST00000490112 SALL2Q9Y467 1007 aaPredicted RBP13.51□□□□□ -0.25
UBP1-211ENST00000490112 ZEB1P37275 1124 aaPredicted RBP13.5□□□□□ -0.25
UBP1-211ENST00000490112 IREB2P48200 963 aaKnown RBP13.5□□□□□ -0.25
UBP1-211ENST00000490112 OTUD7BQ6GQQ9 843 aa13.5□□□□□ -0.25
UBP1-211ENST00000490112 FBXO46Q6PJ61 603 aaPredicted RBP13.5□□□□□ -0.25
UBP1-211ENST00000490112 SRCIN1Q9C0H9 1055 aa13.5□□□□□ -0.25
UBP1-211ENST00000490112 PDE4DIPQ5VU43 2346 aa13.5□□□□□ -0.25
UBP1-211ENST00000490112 FAM205AQ6ZU69 1335 aa13.49□□□□□ -0.25
UBP1-211ENST00000490112 F8W031 263 aaPredicted RBP13.49□□□□□ -0.25
UBP1-211ENST00000490112 SNAP23O00161 211 aa13.49□□□□□ -0.25
UBP1-211ENST00000490112 PLIN1O60240 522 aa13.49□□□□□ -0.25
UBP1-211ENST00000490112 RBM5P52756 815 aaKnown RBP eCLIP13.49□□□□□ -0.25
UBP1-211ENST00000490112 VEZTQ9HBM0 779 aa13.49□□□□□ -0.25
UBP1-211ENST00000490112 SERPINA10Q9UK55 444 aa13.49□□□□□ -0.25
UBP1-211ENST00000490112 A0A1B0GUL6 1792 aa13.48□□□□□ -0.25
UBP1-211ENST00000490112 HIBADHP31937 336 aaKnown RBP13.48□□□□□ -0.25
UBP1-211ENST00000490112 SLC4A10Q6U841 1118 aa13.48□□□□□ -0.25
UBP1-211ENST00000490112 ZNF594Q96JF6 807 aaPredicted RBP13.48□□□□□ -0.25
UBP1-211ENST00000490112 PRMT6Q96LA8 375 aaPredicted RBP13.48□□□□□ -0.25
UBP1-211ENST00000490112 MROH5Q6ZUA9 1318 aa13.47□□□□□ -0.25
UBP1-211ENST00000490112 CLRN2A0PK11 232 aa13.47□□□□□ -0.25
UBP1-211ENST00000490112 EPHA10Q5JZY3 1008 aa13.47□□□□□ -0.25
UBP1-211ENST00000490112 MFSD14BQ5SR56 506 aa13.47□□□□□ -0.25
UBP1-211ENST00000490112 ANKRD13AQ8IZ07 590 aa13.47□□□□□ -0.25
UBP1-211ENST00000490112 TDRD7Q8NHU6 1098 aaKnown RBP13.47□□□□□ -0.25
UBP1-211ENST00000490112 WNK4Q96J92 1243 aa13.47□□□□□ -0.25
UBP1-211ENST00000490112 RASA3Q14644 834 aa13.46□□□□□ -0.25
UBP1-211ENST00000490112 VPS37DQ86XT2 251 aa13.46□□□□□ -0.25
UBP1-211ENST00000490112 TTF2Q9UNY4 1162 aaKnown RBP13.46□□□□□ -0.25
UBP1-211ENST00000490112 UTYO14607 1347 aa13.45□□□□□ -0.26
UBP1-211ENST00000490112 TNNI2P48788 182 aa13.45□□□□□ -0.26
UBP1-211ENST00000490112 CAVIN4Q5BKX8 364 aa13.45□□□□□ -0.26
UBP1-211ENST00000490112 NBPF12Q5TAG4 269 aaPredicted RBP13.45□□□□□ -0.26
UBP1-211ENST00000490112 INTS3Q68E01 1043 aaKnown RBP13.45□□□□□ -0.26
UBP1-211ENST00000490112 TBC1D22AQ8WUA7 517 aa13.45□□□□□ -0.26
UBP1-211ENST00000490112 FAM84BQ96KN1 310 aaPredicted RBP13.45□□□□□ -0.26
UBP1-211ENST00000490112 BOLA1Q9Y3E2 137 aa13.45□□□□□ -0.26
UBP1-211ENST00000490112 RIPOR2Q9Y4F9 1068 aa13.45□□□□□ -0.26
UBP1-211ENST00000490112 LAMB1P07942 1786 aa13.45□□□□□ -0.26
UBP1-211ENST00000490112 SSC5DA1L4H1 1573 aa13.45□□□□□ -0.26
UBP1-211ENST00000490112 HTTP42858 3142 aa13.44□□□□□ -0.26
UBP1-211ENST00000490112 ZNF316A6NFI3 1004 aaPredicted RBP13.44□□□□□ -0.26
UBP1-211ENST00000490112 USP2O75604 605 aaPredicted RBP13.44□□□□□ -0.26
UBP1-211ENST00000490112 HDLBPQ00341 1268 aaKnown RBP13.44□□□□□ -0.26
UBP1-211ENST00000490112 PRPF38BQ5VTL8 546 aaKnown RBP13.44□□□□□ -0.26
UBP1-211ENST00000490112 DZIP1LQ8IYY4 767 aaKnown RBP13.44□□□□□ -0.26
UBP1-211ENST00000490112 FAM9BQ8IZU0 186 aa13.44□□□□□ -0.26
UBP1-211ENST00000490112 ERO1AQ96HE7 468 aa13.44□□□□□ -0.26
UBP1-211ENST00000490112 CLMNQ96JQ2 1002 aa13.44□□□□□ -0.26
UBP1-211ENST00000490112 ZNF70Q9UC06 446 aaPredicted RBP13.44□□□□□ -0.26
UBP1-211ENST00000490112 FZD1Q9UP38 647 aa13.44□□□□□ -0.26
UBP1-211ENST00000490112 JAG2Q9Y219 1238 aa13.44□□□□□ -0.26
UBP1-211ENST00000490112 PCDHAC2Q9Y5I4 1007 aa13.44□□□□□ -0.26
UBP1-211ENST00000490112 CENPFP49454 3210 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms