RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 DZIP1LQ8IYY4 767 aaKnown RBP12.16□□□□□ -0.46
TMEM39A-210ENST00000490099 LPIN2Q92539 896 aa12.16□□□□□ -0.46
TMEM39A-210ENST00000490099 MEIS3Q99687 375 aa12.16□□□□□ -0.46
TMEM39A-210ENST00000490099 TTF2Q9UNY4 1162 aaKnown RBP12.16□□□□□ -0.46
TMEM39A-210ENST00000490099 IPO8O15397 1037 aaKnown RBP12.15□□□□□ -0.46
TMEM39A-210ENST00000490099 MYO1BO43795 1136 aa12.15□□□□□ -0.46
TMEM39A-210ENST00000490099 TRIM27P14373 513 aa12.15□□□□□ -0.46
TMEM39A-210ENST00000490099 RASA3Q14644 834 aa12.15□□□□□ -0.46
TMEM39A-210ENST00000490099 SUPT20HL1Q3ZLR7 823 aa12.15□□□□□ -0.46
TMEM39A-210ENST00000490099 ARMC9Q7Z3E5 817 aa12.15□□□□□ -0.46
TMEM39A-210ENST00000490099 ABHD8Q96I13 439 aa12.15□□□□□ -0.46
TMEM39A-210ENST00000490099 TEPSINQ96N21 525 aa12.15□□□□□ -0.46
TMEM39A-210ENST00000490099 ZNF70Q9UC06 446 aaPredicted RBP12.15□□□□□ -0.46
TMEM39A-210ENST00000490099 LRRFIP2Q9Y608 721 aaKnown RBP12.15□□□□□ -0.46
TMEM39A-210ENST00000490099 SSC5DA1L4H1 1573 aa12.14□□□□□ -0.47
TMEM39A-210ENST00000490099 CLRN2A0PK11 232 aa12.14□□□□□ -0.47
TMEM39A-210ENST00000490099 IL15P40933 162 aaPredicted RBP12.14□□□□□ -0.47
TMEM39A-210ENST00000490099 CRKP46108 304 aa12.14□□□□□ -0.47
TMEM39A-210ENST00000490099 NOM1Q5C9Z4 860 aaKnown RBP12.14□□□□□ -0.47
TMEM39A-210ENST00000490099 NBPF12Q5TAG4 269 aaPredicted RBP12.14□□□□□ -0.47
TMEM39A-210ENST00000490099 ATF7IPQ6VMQ6 1270 aa12.14□□□□□ -0.47
TMEM39A-210ENST00000490099 VPS37DQ86XT2 251 aa12.14□□□□□ -0.47
TMEM39A-210ENST00000490099 ZDHHC15Q96MV8 337 aa12.14□□□□□ -0.47
TMEM39A-210ENST00000490099 CFHR5Q9BXR6 569 aa12.14□□□□□ -0.47
TMEM39A-210ENST00000490099 CASP8AP2Q9UKL3 1982 aa12.14□□□□□ -0.47
TMEM39A-210ENST00000490099 USP2O75604 605 aaPredicted RBP12.13□□□□□ -0.47
TMEM39A-210ENST00000490099 TRPA1O75762 1119 aa12.13□□□□□ -0.47
TMEM39A-210ENST00000490099 BCAR3O75815 825 aa12.13□□□□□ -0.47
TMEM39A-210ENST00000490099 GNAI3P08754 354 aa12.13□□□□□ -0.47
TMEM39A-210ENST00000490099 SLC5A1P13866 664 aa12.13□□□□□ -0.47
TMEM39A-210ENST00000490099 FKBP1CQ5VVH2 108 aa12.13□□□□□ -0.47
TMEM39A-210ENST00000490099 SPRYD7Q5W111 196 aa12.13□□□□□ -0.47
TMEM39A-210ENST00000490099 DIEXFQ68CQ4 756 aaKnown RBP12.13□□□□□ -0.47
TMEM39A-210ENST00000490099 APOBEC3HQ6NTF7 200 aaKnown RBP12.13□□□□□ -0.47
TMEM39A-210ENST00000490099 HHIPL2Q6UWX4 724 aa12.13□□□□□ -0.47
TMEM39A-210ENST00000490099 TDRD3Q9H7E2 651 aaKnown RBP12.13□□□□□ -0.47
TMEM39A-210ENST00000490099 CEP126Q9P2H0 1117 aa12.13□□□□□ -0.47
TMEM39A-210ENST00000490099 ANGEL1Q9UNK9 670 aaKnown RBP12.13□□□□□ -0.47
TMEM39A-210ENST00000490099 IQSEC3Q9UPP2 1182 aaPredicted RBP12.13□□□□□ -0.47
TMEM39A-210ENST00000490099 ECM29Q5VYK3 1845 aa12.12□□□□□ -0.47
TMEM39A-210ENST00000490099 PPP1R12BO60237 982 aaPredicted RBP12.12□□□□□ -0.47
TMEM39A-210ENST00000490099 TNFAIP1Q13829 316 aa12.12□□□□□ -0.47
TMEM39A-210ENST00000490099 TTLL12Q14166 644 aaPredicted RBP12.12□□□□□ -0.47
TMEM39A-210ENST00000490099 WDR66Q8TBY9 1149 aa12.12□□□□□ -0.47
TMEM39A-210ENST00000490099 SEMA3EO15041 775 aa12.11□□□□□ -0.47
TMEM39A-210ENST00000490099 RBM5P52756 815 aaKnown RBP eCLIP12.11□□□□□ -0.47
TMEM39A-210ENST00000490099 INHBEP58166 350 aa12.11□□□□□ -0.47
TMEM39A-210ENST00000490099 CHAF1AQ13111 956 aaPredicted RBP12.11□□□□□ -0.47
TMEM39A-210ENST00000490099 ATP2B3Q16720 1220 aa12.11□□□□□ -0.47
TMEM39A-210ENST00000490099 TEKT1Q969V4 418 aa12.11□□□□□ -0.47
TMEM39A-210ENST00000490099 SLC10A4Q96EP9 437 aa12.11□□□□□ -0.47
TMEM39A-210ENST00000490099 MCOLN1Q9GZU1 580 aa12.11□□□□□ -0.47
TMEM39A-210ENST00000490099 VEZTQ9HBM0 779 aa12.11□□□□□ -0.47
TMEM39A-210ENST00000490099 FZD1Q9UP38 647 aa12.11□□□□□ -0.47
TMEM39A-210ENST00000490099 PA2G4Q9UQ80 394 aaKnown RBP12.11□□□□□ -0.47
TMEM39A-210ENST00000490099 TNNQ9UQP3 1299 aa12.11□□□□□ -0.47
TMEM39A-210ENST00000490099 AKAP11Q9UKA4 1901 aa12.11□□□□□ -0.47
TMEM39A-210ENST00000490099 SALL1Q9NSC2 1324 aa12.11□□□□□ -0.47
TMEM39A-210ENST00000490099 TESPA1A2RU30 521 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-210ENST00000490099 FRAT2O75474 233 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-210ENST00000490099 ZBTB48P10074 688 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-210ENST00000490099 RGS19P49795 217 aa12.1□□□□□ -0.47
TMEM39A-210ENST00000490099 PRKG1Q13976 671 aa12.1□□□□□ -0.47
TMEM39A-210ENST00000490099 FAM83AQ86UY5 434 aa12.1□□□□□ -0.47
TMEM39A-210ENST00000490099 CDAN1Q8IWY9 1227 aa12.1□□□□□ -0.47
TMEM39A-210ENST00000490099 CLMNQ96JQ2 1002 aa12.1□□□□□ -0.47
TMEM39A-210ENST00000490099 SIL1Q9H173 461 aa12.1□□□□□ -0.47
TMEM39A-210ENST00000490099 ARAP2Q8WZ64 1704 aa12.1□□□□□ -0.47
TMEM39A-210ENST00000490099 MAST3O60307 1309 aa12.1□□□□□ -0.47
TMEM39A-210ENST00000490099 MANSC4A6NHS7 340 aaPredicted RBP12.09□□□□□ -0.47
TMEM39A-210ENST00000490099 SRGAP3O43295 1099 aa12.09□□□□□ -0.47
TMEM39A-210ENST00000490099 GNAI2P04899 355 aa12.09□□□□□ -0.47
TMEM39A-210ENST00000490099 PHKA1P46020 1223 aa12.09□□□□□ -0.47
TMEM39A-210ENST00000490099 HNRNPUQ00839 825 aaKnown RBP eCLIP12.09□□□□□ -0.47
TMEM39A-210ENST00000490099 SREBF2Q12772 1141 aa12.09□□□□□ -0.47
TMEM39A-210ENST00000490099 ZKSCAN2Q63HK3 967 aa12.09□□□□□ -0.47
TMEM39A-210ENST00000490099 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.09□□□□□ -0.47
TMEM39A-210ENST00000490099 ANKRD13AQ8IZ07 590 aa12.09□□□□□ -0.47
TMEM39A-210ENST00000490099 WNK4Q96J92 1243 aa12.09□□□□□ -0.47
TMEM39A-210ENST00000490099 TMEM39BQ9GZU3 492 aa12.09□□□□□ -0.47
TMEM39A-210ENST00000490099 GNL3LQ9NVN8 582 aaKnown RBP12.09□□□□□ -0.47
TMEM39A-210ENST00000490099 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.09□□□□□ -0.47
TMEM39A-210ENST00000490099 PDS5AQ29RF7 1337 aaKnown RBP12.09□□□□□ -0.47
TMEM39A-210ENST00000490099 ADORA1P30542 326 aa12.08□□□□□ -0.48
TMEM39A-210ENST00000490099 GJA5P36382 358 aa12.08□□□□□ -0.48
TMEM39A-210ENST00000490099 IREB2P48200 963 aaKnown RBP12.08□□□□□ -0.48
TMEM39A-210ENST00000490099 TNNI2P48788 182 aa12.08□□□□□ -0.48
TMEM39A-210ENST00000490099 TIMM10P62072 90 aa12.08□□□□□ -0.48
TMEM39A-210ENST00000490099 CCDC102BQ68D86 513 aa12.08□□□□□ -0.48
TMEM39A-210ENST00000490099 TMEM57Q8N5G2 664 aa12.08□□□□□ -0.48
TMEM39A-210ENST00000490099 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.08□□□□□ -0.48
TMEM39A-210ENST00000490099 FAM163AQ96GL9 167 aaPredicted RBP12.08□□□□□ -0.48
TMEM39A-210ENST00000490099 DENND2AQ9ULE3 1009 aa12.08□□□□□ -0.48
TMEM39A-210ENST00000490099 PNMA6EA0A0J9YXQ4 647 aa12.07□□□□□ -0.48
TMEM39A-210ENST00000490099 TCP10L2B9ZVM9 353 aa12.07□□□□□ -0.48
TMEM39A-210ENST00000490099 TBC1D8O95759 1140 aa12.07□□□□□ -0.48
TMEM39A-210ENST00000490099 DGKZQ13574 1117 aa12.07□□□□□ -0.48
TMEM39A-210ENST00000490099 IFNL1Q8IU54 200 aa12.07□□□□□ -0.48
TMEM39A-210ENST00000490099 FRAT1Q92837 279 aaPredicted RBP12.07□□□□□ -0.48
TMEM39A-210ENST00000490099 MS4A4AQ96JQ5 239 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms