RNA–Protein interactions for RNA: ENST00000489994.5

IFRD1-215, Transcript of interferon related developmental regulator 1, humanhuman

TSL 1 (best)

Gene IFRD1, Length 1,721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-215ENST00000489994 SWAP70Q9UH65 585 aa6.65□□□□□ -1.34
IFRD1-215ENST00000489994 PUF60Q9UHX1 559 aaKnown RBP6.65□□□□□ -1.34
IFRD1-215ENST00000489994 CTDP1Q9Y5B0 961 aaPredicted RBP6.65□□□□□ -1.34
IFRD1-215ENST00000489994 ANKRD30AQ9BXX3 1397 aa6.65□□□□□ -1.35
IFRD1-215ENST00000489994 CFAP69A5D8W1 941 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 KLHL33A6NCF5 533 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 SPINT1O43278 529 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 CBFA2T2O43439 604 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 MAN1A2O60476 641 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 MYCP01106 439 aaPredicted RBP6.64□□□□□ -1.35
IFRD1-215ENST00000489994 PAX7P23759 505 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 MAPK1P28482 360 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 ADD1P35611 737 aaKnown RBP6.64□□□□□ -1.35
IFRD1-215ENST00000489994 FLT3P36888 993 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 PTGIRP43119 386 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 NAP1L1P55209 391 aaKnown RBP6.64□□□□□ -1.35
IFRD1-215ENST00000489994 GTF2IP78347 998 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 POU5F1Q01860 360 aaKnown RBP6.64□□□□□ -1.35
IFRD1-215ENST00000489994 PSME1Q06323 249 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 TSGA10IPQ3SY00 556 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 TBC1D10BQ4KMP7 808 aaPredicted RBP6.64□□□□□ -1.35
IFRD1-215ENST00000489994 HSP90B2PQ58FF3 399 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 GJC2Q5T442 439 aaPredicted RBP6.64□□□□□ -1.35
IFRD1-215ENST00000489994 L1TD1Q5T7N2 865 aaKnown RBP6.64□□□□□ -1.35
IFRD1-215ENST00000489994 C11orf96Q7Z7L8 435 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 SIX5Q8N196 739 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 UBXN4Q92575 508 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 AGBL1Q96MI9 1066 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 C8orf37Q96NL8 207 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 NCAPGQ9BPX3 1015 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 ARPC5LQ9BPX5 153 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 NRBP1Q9UHY1 535 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 ADGRL2O95490 1459 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 ATAD2Q6PL18 1390 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 ICMTO60725 284 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 HDLBPQ00341 1268 aaKnown RBP6.64□□□□□ -1.35
IFRD1-215ENST00000489994 SF3A1Q15459 793 aaKnown RBP6.64□□□□□ -1.35
IFRD1-215ENST00000489994 CCDC184Q52MB2 194 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 CCDC102BQ68D86 513 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 TAS1R3Q7RTX0 852 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 CYP2U1Q7Z449 544 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 DDX17Q92841 729 aaKnown RBP6.64□□□□□ -1.35
IFRD1-215ENST00000489994 CFAP53Q96M91 514 aa6.64□□□□□ -1.35
IFRD1-215ENST00000489994 IPO9Q96P70 1041 aaKnown RBP6.64□□□□□ -1.35
IFRD1-215ENST00000489994 IQGAP3Q86VI3 1631 aa6.63□□□□□ -1.35
IFRD1-215ENST00000489994 COL22A1Q8NFW1 1626 aaPredicted RBP6.63□□□□□ -1.35
IFRD1-215ENST00000489994 TTLL8A6PVC2 850 aa6.63□□□□□ -1.35
IFRD1-215ENST00000489994 ZBTB7BO15156 539 aaPredicted RBP6.63□□□□□ -1.35
IFRD1-215ENST00000489994 NAT1P18440 290 aa6.63□□□□□ -1.35
IFRD1-215ENST00000489994 CASQ1P31415 396 aa6.63□□□□□ -1.35
IFRD1-215ENST00000489994 USP4Q13107 963 aa6.63□□□□□ -1.35
IFRD1-215ENST00000489994 CTR9Q6PD62 1173 aa6.63□□□□□ -1.35
IFRD1-215ENST00000489994 TPCN2Q8NHX9 752 aa6.63□□□□□ -1.35
IFRD1-215ENST00000489994 LRRC59Q96AG4 307 aaKnown RBP6.63□□□□□ -1.35
IFRD1-215ENST00000489994 ZNF775Q96BV0 537 aaPredicted RBP6.63□□□□□ -1.35
IFRD1-215ENST00000489994 HINFPQ9BQA5 517 aa6.63□□□□□ -1.35
IFRD1-215ENST00000489994 NUCKS1Q9H1E3 243 aaKnown RBP6.63□□□□□ -1.35
IFRD1-215ENST00000489994 RSPH9Q9H1X1 276 aaPredicted RBP6.63□□□□□ -1.35
IFRD1-215ENST00000489994 DONSONQ9NYP3 566 aa6.63□□□□□ -1.35
IFRD1-215ENST00000489994 KIAA1024Q9UPX6 916 aa6.63□□□□□ -1.35
IFRD1-215ENST00000489994 SOS2Q07890 1332 aaPredicted RBP6.63□□□□□ -1.35
IFRD1-215ENST00000489994 LRP5O75197 1615 aa6.63□□□□□ -1.35
IFRD1-215ENST00000489994 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.63□□□□□ -1.35
IFRD1-215ENST00000489994 SFI1A8K8P3 1242 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 TPM3P06753 285 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 VDRP11473 427 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 CCT2P78371 535 aaKnown RBP6.62□□□□□ -1.35
IFRD1-215ENST00000489994 KIAA2012Q0VF49 1180 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 OCLNQ16625 522 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 ZSCAN29Q8IWY8 852 aaPredicted RBP6.62□□□□□ -1.35
IFRD1-215ENST00000489994 GPATCH3Q96I76 525 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 ZNF395Q9H8N7 513 aaPredicted RBP6.62□□□□□ -1.35
IFRD1-215ENST00000489994 SPHKAPQ2M3C7 1700 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 ATRNO75882 1429 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 BICDL2A1A5D9 508 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 C21orf2O43822 256 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 DKK1O94907 266 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 ADAMTS2O95450 1211 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 VAMP1P23763 118 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 ABCD1P33897 745 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 C1orf131Q8NDD1 294 aaKnown RBP6.62□□□□□ -1.35
IFRD1-215ENST00000489994 NGLY1Q96IV0 654 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 POLMQ9NP87 494 aaPredicted RBP6.62□□□□□ -1.35
IFRD1-215ENST00000489994 DCTN4Q9UJW0 460 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 FAN1Q9Y2M0 1017 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 KNSTRNQ9Y448 316 aa6.62□□□□□ -1.35
IFRD1-215ENST00000489994 ADGRL3Q9HAR2 1447 aa6.61□□□□□ -1.35
IFRD1-215ENST00000489994 KIF1BO60333 1816 aa6.61□□□□□ -1.35
IFRD1-215ENST00000489994 IPO5O00410 1097 aaKnown RBP6.61□□□□□ -1.35
IFRD1-215ENST00000489994 HMMRO75330 724 aa6.61□□□□□ -1.35
IFRD1-215ENST00000489994 SCTRP47872 440 aa6.61□□□□□ -1.35
IFRD1-215ENST00000489994 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.61□□□□□ -1.35
IFRD1-215ENST00000489994 TTC30BQ8N4P2 665 aa6.61□□□□□ -1.35
IFRD1-215ENST00000489994 GTF3C2Q8WUA4 911 aaPredicted RBP6.61□□□□□ -1.35
IFRD1-215ENST00000489994 ASB16Q96NS5 453 aa6.61□□□□□ -1.35
IFRD1-215ENST00000489994 INSM2Q96T92 566 aaPredicted RBP6.61□□□□□ -1.35
IFRD1-215ENST00000489994 GABBR1Q9UBS5 961 aa6.61□□□□□ -1.35
IFRD1-215ENST00000489994 ANKRD50Q9ULJ7 1429 aa6.61□□□□□ -1.35
IFRD1-215ENST00000489994 KDF1Q8NAX2 398 aaPredicted RBP6.6□□□□□ -1.35
IFRD1-215ENST00000489994 RSPH1Q8WYR4 309 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms