RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 DZIP1LQ8IYY4 767 aaKnown RBP28.24■■■□□ 2.11
HOXA9-205ENST00000489695 BRI3BPQ8WY22 251 aa28.24■■■□□ 2.11
HOXA9-205ENST00000489695 FAM84BQ96KN1 310 aaPredicted RBP28.24■■■□□ 2.11
HOXA9-205ENST00000489695 KIAA0100Q14667 2235 aaKnown RBP28.24■■■□□ 2.11
HOXA9-205ENST00000489695 GYG1P46976 350 aa28.23■■■□□ 2.11
HOXA9-205ENST00000489695 EXOSC9Q06265 439 aaKnown RBP28.23■■■□□ 2.11
HOXA9-205ENST00000489695 ZNF333Q96JL9 665 aa28.23■■■□□ 2.11
HOXA9-205ENST00000489695 VGLL4Q14135 290 aa28.22■■■□□ 2.11
HOXA9-205ENST00000489695 WDR63Q8IWG1 891 aa28.22■■■□□ 2.11
HOXA9-205ENST00000489695 CNKSR2Q8WXI2 1034 aa28.22■■■□□ 2.11
HOXA9-205ENST00000489695 MRS2Q9HD23 443 aa28.22■■■□□ 2.11
HOXA9-205ENST00000489695 GTF2A2P52657 109 aa28.21■■■□□ 2.11
HOXA9-205ENST00000489695 MAP3K9P80192 1104 aa28.21■■■□□ 2.11
HOXA9-205ENST00000489695 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.21■■■□□ 2.11
HOXA9-205ENST00000489695 TMEM39BQ9GZU3 492 aa28.21■■■□□ 2.11
HOXA9-205ENST00000489695 ZFYVE28Q9HCC9 887 aa28.21■■■□□ 2.11
HOXA9-205ENST00000489695 CCL15-CCL14A0A0B4J2E2 113 aa28.2■■■□□ 2.1
HOXA9-205ENST00000489695 TCP10L2B9ZVM9 353 aa28.2■■■□□ 2.1
HOXA9-205ENST00000489695 CRKP46108 304 aa28.2■■■□□ 2.1
HOXA9-205ENST00000489695 ARHGEF6Q15052 776 aa28.2■■■□□ 2.1
HOXA9-205ENST00000489695 CCL15Q16663 113 aa28.2■■■□□ 2.1
HOXA9-205ENST00000489695 TNNI2P48788 182 aa28.19■■■□□ 2.1
HOXA9-205ENST00000489695 TAF1CQ15572 869 aaPredicted RBP28.19■■■□□ 2.1
HOXA9-205ENST00000489695 TMEM106CQ9BVX2 250 aa28.19■■■□□ 2.1
HOXA9-205ENST00000489695 C9orf78Q9NZ63 289 aaPredicted RBP28.19■■■□□ 2.1
HOXA9-205ENST00000489695 NBPF11Q86T75 865 aa28.18■■■□□ 2.1
HOXA9-205ENST00000489695 FAM43AQ8N2R8 423 aa28.18■■■□□ 2.1
HOXA9-205ENST00000489695 PUS3Q9BZE2 481 aaKnown RBP28.18■■■□□ 2.1
HOXA9-205ENST00000489695 RIPOR2Q9Y4F9 1068 aa28.18■■■□□ 2.1
HOXA9-205ENST00000489695 CSADQ9Y600 493 aa28.18■■■□□ 2.1
HOXA9-205ENST00000489695 ALDH1L1O75891 902 aa28.17■■■□□ 2.1
HOXA9-205ENST00000489695 SLC9C1Q4G0N8 1177 aa28.17■■■□□ 2.1
HOXA9-205ENST00000489695 PTCH2Q9Y6C5 1203 aa28.17■■■□□ 2.1
HOXA9-205ENST00000489695 ARAP2Q8WZ64 1704 aa28.17■■■□□ 2.1
HOXA9-205ENST00000489695 HDLBPQ00341 1268 aaKnown RBP28.16■■■□□ 2.1
HOXA9-205ENST00000489695 GRIK5Q16478 980 aa28.16■■■□□ 2.1
HOXA9-205ENST00000489695 FBXO33Q7Z6M2 555 aa28.16■■■□□ 2.1
HOXA9-205ENST00000489695 OTUD5Q96G74 571 aa28.16■■■□□ 2.1
HOXA9-205ENST00000489695 KAZALD1Q96I82 304 aa28.16■■■□□ 2.1
HOXA9-205ENST00000489695 SPDYE5A6NIY4 337 aa28.15■■■□□ 2.1
HOXA9-205ENST00000489695 MROH5Q6ZUA9 1318 aa28.15■■■□□ 2.1
HOXA9-205ENST00000489695 SUCLG2Q96I99 432 aa28.13■■■□□ 2.09
HOXA9-205ENST00000489695 SRCIN1Q9C0H9 1055 aa28.13■■■□□ 2.09
HOXA9-205ENST00000489695 ZCCHC17Q9NP64 241 aaKnown RBP28.13■■■□□ 2.09
HOXA9-205ENST00000489695 SPINK5Q9NQ38 1064 aaPredicted RBP28.13■■■□□ 2.09
HOXA9-205ENST00000489695 TLR2O60603 784 aa28.12■■■□□ 2.09
HOXA9-205ENST00000489695 FXR1P51114 621 aaKnown RBP eCLIP28.12■■■□□ 2.09
HOXA9-205ENST00000489695 ERO1BQ86YB8 467 aa28.12■■■□□ 2.09
HOXA9-205ENST00000489695 TBC1D22AQ8WUA7 517 aa28.12■■■□□ 2.09
HOXA9-205ENST00000489695 MRIQ9BWK5 157 aa28.12■■■□□ 2.09
HOXA9-205ENST00000489695 SALL2Q9Y467 1007 aaPredicted RBP28.12■■■□□ 2.09
HOXA9-205ENST00000489695 SNCAIPQ9Y6H5 919 aa28.12■■■□□ 2.09
HOXA9-205ENST00000489695 CETPP11597 493 aa28.11■■■□□ 2.09
HOXA9-205ENST00000489695 VPS37DQ86XT2 251 aa28.11■■■□□ 2.09
HOXA9-205ENST00000489695 TEKT1Q969V4 418 aa28.11■■■□□ 2.09
HOXA9-205ENST00000489695 UTYO14607 1347 aa28.11■■■□□ 2.09
HOXA9-205ENST00000489695 WDHD1O75717 1129 aaPredicted RBP28.1■■■□□ 2.09
HOXA9-205ENST00000489695 NBPF7P0C2Y1 421 aaPredicted RBP28.1■■■□□ 2.09
HOXA9-205ENST00000489695 SLC4A8Q2Y0W8 1093 aa28.1■■■□□ 2.09
HOXA9-205ENST00000489695 FKBP1CQ5VVH2 108 aa28.1■■■□□ 2.09
HOXA9-205ENST00000489695 SLC4A10Q6U841 1118 aa28.1■■■□□ 2.09
HOXA9-205ENST00000489695 FAM83AQ86UY5 434 aa28.1■■■□□ 2.09
HOXA9-205ENST00000489695 ZDHHC15Q96MV8 337 aa28.1■■■□□ 2.09
HOXA9-205ENST00000489695 IQSEC3Q9UPP2 1182 aaPredicted RBP28.1■■■□□ 2.09
HOXA9-205ENST00000489695 BTBD19C9JJ37 291 aa28.09■■■□□ 2.09
HOXA9-205ENST00000489695 CACNB3P54284 484 aa28.09■■■□□ 2.09
HOXA9-205ENST00000489695 LACTBP83111 547 aaPredicted RBP28.09■■■□□ 2.09
HOXA9-205ENST00000489695 ARHGAP39Q9C0H5 1083 aa28.09■■■□□ 2.09
HOXA9-205ENST00000489695 GNRH1P01148 92 aa28.08■■■□□ 2.09
HOXA9-205ENST00000489695 CHAF1AQ13111 956 aaPredicted RBP28.08■■■□□ 2.09
HOXA9-205ENST00000489695 RABL6Q3YEC7 729 aaPredicted RBP28.08■■■□□ 2.09
HOXA9-205ENST00000489695 CAVIN4Q5BKX8 364 aa28.08■■■□□ 2.09
HOXA9-205ENST00000489695 ZKSCAN4Q969J2 545 aaPredicted RBP28.08■■■□□ 2.09
HOXA9-205ENST00000489695 WRNIP1Q96S55 665 aa28.08■■■□□ 2.09
HOXA9-205ENST00000489695 IRF6O14896 467 aa28.07■■■□□ 2.08
HOXA9-205ENST00000489695 SNAPC2Q13487 334 aa28.07■■■□□ 2.08
HOXA9-205ENST00000489695 KIF22Q14807 665 aa28.07■■■□□ 2.08
HOXA9-205ENST00000489695 APOBEC3HQ6NTF7 200 aaKnown RBP28.07■■■□□ 2.08
HOXA9-205ENST00000489695 VGLL2Q8N8G2 317 aa28.07■■■□□ 2.08
HOXA9-205ENST00000489695 HOOK2Q96ED9 719 aa28.07■■■□□ 2.08
HOXA9-205ENST00000489695 COLQQ9Y215 455 aaPredicted RBP28.07■■■□□ 2.08
HOXA9-205ENST00000489695 PPIL2Q13356 520 aa28.06■■■□□ 2.08
HOXA9-205ENST00000489695 LRRC24Q50LG9 513 aa28.06■■■□□ 2.08
HOXA9-205ENST00000489695 SH3TC2Q8TF17 1288 aa28.06■■■□□ 2.08
HOXA9-205ENST00000489695 BICC1Q9H694 974 aaKnown RBP28.06■■■□□ 2.08
HOXA9-205ENST00000489695 SUGT1Q9Y2Z0 365 aa28.06■■■□□ 2.08
HOXA9-205ENST00000489695 FRAT2O75474 233 aaPredicted RBP28.05■■■□□ 2.08
HOXA9-205ENST00000489695 PDE8BO95263 885 aa28.05■■■□□ 2.08
HOXA9-205ENST00000489695 PRMT2P55345 433 aa28.05■■■□□ 2.08
HOXA9-205ENST00000489695 METTL24Q5JXM2 366 aa28.05■■■□□ 2.08
HOXA9-205ENST00000489695 TMOD2Q9NZR1 351 aa28.05■■■□□ 2.08
HOXA9-205ENST00000489695 RPAP1Q9BWH6 1393 aaPredicted RBP28.03■■■□□ 2.08
HOXA9-205ENST00000489695 MAST3O60307 1309 aa28.03■■■□□ 2.08
HOXA9-205ENST00000489695 MYCP01106 439 aaPredicted RBP28.03■■■□□ 2.08
HOXA9-205ENST00000489695 BCAMP50895 628 aa28.03■■■□□ 2.08
HOXA9-205ENST00000489695 DCAF15Q66K64 600 aa28.03■■■□□ 2.08
HOXA9-205ENST00000489695 HHIPL2Q6UWX4 724 aa28.03■■■□□ 2.08
HOXA9-205ENST00000489695 C17orf99Q6UX52 265 aa28.03■■■□□ 2.08
HOXA9-205ENST00000489695 ANKRD44Q8N8A2 993 aa28.03■■■□□ 2.08
HOXA9-205ENST00000489695 KIF16BQ96L93 1317 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms