RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 DZIP1Q86YF9 867 aaKnown RBP16.79■□□□□ 0.28
C9orf3-221ENST00000489562 SLF2Q8IX21 1173 aa16.79■□□□□ 0.28
C9orf3-221ENST00000489562 GPC2Q8N158 579 aa16.79■□□□□ 0.28
C9orf3-221ENST00000489562 CERS5Q8N5B7 392 aa16.79■□□□□ 0.28
C9orf3-221ENST00000489562 UBE3CQ15386 1083 aa16.78■□□□□ 0.28
C9orf3-221ENST00000489562 CASC1Q6TDU7 716 aa16.78■□□□□ 0.28
C9orf3-221ENST00000489562 ZNF541Q9H0D2 1346 aa16.77■□□□□ 0.28
C9orf3-221ENST00000489562 RNF113AO15541 343 aaKnown RBP16.77■□□□□ 0.28
C9orf3-221ENST00000489562 CDC45O75419 566 aa16.77■□□□□ 0.28
C9orf3-221ENST00000489562 LDHCP07864 332 aa16.77■□□□□ 0.28
C9orf3-221ENST00000489562 PDE6AP16499 860 aa16.77■□□□□ 0.28
C9orf3-221ENST00000489562 HDLBPQ00341 1268 aaKnown RBP16.77■□□□□ 0.28
C9orf3-221ENST00000489562 SLC9C2Q5TAH2 1124 aa16.77■□□□□ 0.28
C9orf3-221ENST00000489562 NAA16Q6N069 864 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-221ENST00000489562 DPF2Q92785 391 aa16.77■□□□□ 0.28
C9orf3-221ENST00000489562 NSUN4Q96CB9 384 aaKnown RBP16.77■□□□□ 0.28
C9orf3-221ENST00000489562 GMLQ99445 158 aa16.77■□□□□ 0.28
C9orf3-221ENST00000489562 MRIQ9BWK5 157 aa16.77■□□□□ 0.28
C9orf3-221ENST00000489562 DIAPH3Q9NSV4 1193 aa16.77■□□□□ 0.28
C9orf3-221ENST00000489562 HDAC9Q9UKV0 1011 aa16.77■□□□□ 0.28
C9orf3-221ENST00000489562 ECM29Q5VYK3 1845 aa16.77■□□□□ 0.27
C9orf3-221ENST00000489562 ADD2P35612 726 aa16.76■□□□□ 0.27
C9orf3-221ENST00000489562 MECOMQ03112 1051 aa16.76■□□□□ 0.27
C9orf3-221ENST00000489562 DPY19L2Q6NUT2 758 aa16.76■□□□□ 0.27
C9orf3-221ENST00000489562 MAGEB6Q8N7X4 407 aa16.76■□□□□ 0.27
C9orf3-221ENST00000489562 TTF2Q9UNY4 1162 aaKnown RBP16.76■□□□□ 0.27
C9orf3-221ENST00000489562 SCN4AP35499 1836 aa16.75■□□□□ 0.27
C9orf3-221ENST00000489562 KIAA0825Q8IV33 1275 aa16.75■□□□□ 0.27
C9orf3-221ENST00000489562 OGFOD1Q8N543 542 aa16.75■□□□□ 0.27
C9orf3-221ENST00000489562 RUFY2Q8WXA3 655 aa16.75■□□□□ 0.27
C9orf3-221ENST00000489562 APPBP2Q92624 585 aa16.75■□□□□ 0.27
C9orf3-221ENST00000489562 FAM163AQ96GL9 167 aaPredicted RBP16.75■□□□□ 0.27
C9orf3-221ENST00000489562 MXD3Q9BW11 206 aa16.75■□□□□ 0.27
C9orf3-221ENST00000489562 GJA3Q9Y6H8 435 aa16.75■□□□□ 0.27
C9orf3-221ENST00000489562 RAD50Q92878 1312 aa16.74■□□□□ 0.27
C9orf3-221ENST00000489562 ZNF532Q9HCE3 1301 aa16.74■□□□□ 0.27
C9orf3-221ENST00000489562 USP17L8P0C7I0 530 aa16.74■□□□□ 0.27
C9orf3-221ENST00000489562 CYP7A1P22680 504 aa16.74■□□□□ 0.27
C9orf3-221ENST00000489562 CHMLP26374 656 aa16.74■□□□□ 0.27
C9orf3-221ENST00000489562 GRIK5Q16478 980 aa16.74■□□□□ 0.27
C9orf3-221ENST00000489562 HHIPL2Q6UWX4 724 aa16.74■□□□□ 0.27
C9orf3-221ENST00000489562 CERS3Q8IU89 383 aa16.74■□□□□ 0.27
C9orf3-221ENST00000489562 TEKT1Q969V4 418 aa16.74■□□□□ 0.27
C9orf3-221ENST00000489562 HELLSQ9NRZ9 838 aa16.74■□□□□ 0.27
C9orf3-221ENST00000489562 SERPINA10Q9UK55 444 aa16.74■□□□□ 0.27
C9orf3-221ENST00000489562 MROH7-TTC4A0A0A0MT08 1334 aa16.73■□□□□ 0.27
C9orf3-221ENST00000489562 GAKO14976 1311 aa16.73■□□□□ 0.27
C9orf3-221ENST00000489562 TCRBV5S4A2TA0A5A2 114 aa16.73■□□□□ 0.27
C9orf3-221ENST00000489562 F8W031 263 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-221ENST00000489562 EIF5BO60841 1220 aaKnown RBP16.73■□□□□ 0.27
C9orf3-221ENST00000489562 GMPSP49915 693 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-221ENST00000489562 ZMYM1Q5SVZ6 1142 aa16.73■□□□□ 0.27
C9orf3-221ENST00000489562 NOL10Q9BSC4 688 aaKnown RBP16.73■□□□□ 0.27
C9orf3-221ENST00000489562 ZBTB12Q9Y330 459 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-221ENST00000489562 ADAMTSL1Q8N6G6 1762 aa16.73■□□□□ 0.27
C9orf3-221ENST00000489562 CDK5RAP2Q96SN8 1893 aa16.73■□□□□ 0.27
C9orf3-221ENST00000489562 WDR90Q96KV7 1748 aa16.73■□□□□ 0.27
C9orf3-221ENST00000489562 GLTPD2A6NH11 291 aa16.72■□□□□ 0.27
C9orf3-221ENST00000489562 MFAP1P55081 439 aaKnown RBP16.72■□□□□ 0.27
C9orf3-221ENST00000489562 ZNF384Q8TF68 577 aa16.72■□□□□ 0.27
C9orf3-221ENST00000489562 L3MBTL3Q96JM7 780 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-221ENST00000489562 FOCADQ5VW36 1801 aa16.72■□□□□ 0.27
C9orf3-221ENST00000489562 DDNO94850 711 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-221ENST00000489562 BAG3O95817 575 aa16.71■□□□□ 0.27
C9orf3-221ENST00000489562 PLCG2P16885 1265 aa16.71■□□□□ 0.27
C9orf3-221ENST00000489562 LMOD1P29536 600 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-221ENST00000489562 CRKP46108 304 aa16.71■□□□□ 0.27
C9orf3-221ENST00000489562 SCNN1DP51172 638 aa16.71■□□□□ 0.27
C9orf3-221ENST00000489562 ZNF280AP59817 542 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-221ENST00000489562 NMIQ13287 307 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-221ENST00000489562 DIXDC1Q155Q3 683 aa16.71■□□□□ 0.27
C9orf3-221ENST00000489562 MCMDC2Q4G0Z9 681 aa16.71■□□□□ 0.27
C9orf3-221ENST00000489562 CWC27Q6UX04 472 aaKnown RBP16.71■□□□□ 0.27
C9orf3-221ENST00000489562 ZDHHC15Q96MV8 337 aa16.71■□□□□ 0.27
C9orf3-221ENST00000489562 DAGLAQ9Y4D2 1042 aa16.71■□□□□ 0.27
C9orf3-221ENST00000489562 GPR75-ASB3A0A0A6YYF3 556 aa16.7■□□□□ 0.26
C9orf3-221ENST00000489562 A0A0D9SFI3 127 aa16.7■□□□□ 0.26
C9orf3-221ENST00000489562 H7C1D1 291 aa16.7■□□□□ 0.26
C9orf3-221ENST00000489562 MICALL2Q8IY33 904 aa16.7■□□□□ 0.26
C9orf3-221ENST00000489562 MTMR14Q8NCE2 650 aa16.7■□□□□ 0.26
C9orf3-221ENST00000489562 AIDAQ96BJ3 306 aa16.7■□□□□ 0.26
C9orf3-221ENST00000489562 GPRC5DQ9NZD1 345 aa16.7■□□□□ 0.26
C9orf3-221ENST00000489562 CNOT7Q9UIV1 285 aaKnown RBP16.7■□□□□ 0.26
C9orf3-221ENST00000489562 MAGEB6P1A0A0J9YX57 407 aa16.69■□□□□ 0.26
C9orf3-221ENST00000489562 PPP4CP60510 307 aa16.69■□□□□ 0.26
C9orf3-221ENST00000489562 DLGAP5Q15398 846 aa16.69■□□□□ 0.26
C9orf3-221ENST00000489562 ADGRA1Q86SQ6 560 aa16.69■□□□□ 0.26
C9orf3-221ENST00000489562 OSBP2Q969R2 916 aa16.69■□□□□ 0.26
C9orf3-221ENST00000489562 FAM227BQ96M60 508 aa16.69■□□□□ 0.26
C9orf3-221ENST00000489562 ESYT1Q9BSJ8 1104 aa16.69■□□□□ 0.26
C9orf3-221ENST00000489562 SGSM2O43147 1006 aa16.68■□□□□ 0.26
C9orf3-221ENST00000489562 GNAT2P19087 354 aa16.68■□□□□ 0.26
C9orf3-221ENST00000489562 BTDP43251 543 aa16.68■□□□□ 0.26
C9orf3-221ENST00000489562 RBM5P52756 815 aaKnown RBP eCLIP16.68■□□□□ 0.262e-7■■■■□ 26.1
C9orf3-221ENST00000489562 CFAP100Q494V2 611 aa16.68■□□□□ 0.26
C9orf3-221ENST00000489562 PUS7LQ9H0K6 701 aaKnown RBP16.68■□□□□ 0.26
C9orf3-221ENST00000489562 MYOZ2Q9NPC6 264 aa16.68■□□□□ 0.26
C9orf3-221ENST00000489562 CCDC171Q6TFL3 1326 aa16.68■□□□□ 0.26
C9orf3-221ENST00000489562 IQCA1LA6NCM1 817 aa16.67■□□□□ 0.26
C9orf3-221ENST00000489562 GPAA1O43292 621 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms