RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 SUCLG2Q96I99 432 aa13.09□□□□□ -0.31
CHKB-211ENST00000489453 EFCC1Q9HA90 598 aa13.09□□□□□ -0.31
CHKB-211ENST00000489453 CSADQ9Y600 493 aa13.09□□□□□ -0.31
CHKB-211ENST00000489453 GJA5P36382 358 aa13.08□□□□□ -0.32
CHKB-211ENST00000489453 SP3Q02447 781 aa13.08□□□□□ -0.32
CHKB-211ENST00000489453 ARHGEF6Q15052 776 aa13.08□□□□□ -0.32
CHKB-211ENST00000489453 CAVIN4Q5BKX8 364 aa13.08□□□□□ -0.32
CHKB-211ENST00000489453 METTL24Q5JXM2 366 aa13.08□□□□□ -0.32
CHKB-211ENST00000489453 TBC1D22AQ8WUA7 517 aa13.08□□□□□ -0.32
CHKB-211ENST00000489453 GCC1Q96CN9 775 aa13.08□□□□□ -0.32
CHKB-211ENST00000489453 FAM84BQ96KN1 310 aaPredicted RBP13.08□□□□□ -0.32
CHKB-211ENST00000489453 TMOD2Q9NZR1 351 aa13.08□□□□□ -0.32
CHKB-211ENST00000489453 TAF1CQ15572 869 aaPredicted RBP13.07□□□□□ -0.32
CHKB-211ENST00000489453 FAM9BQ8IZU0 186 aa13.07□□□□□ -0.32
CHKB-211ENST00000489453 PUS3Q9BZE2 481 aaKnown RBP13.07□□□□□ -0.32
CHKB-211ENST00000489453 TMEM39BQ9GZU3 492 aa13.07□□□□□ -0.32
CHKB-211ENST00000489453 IQSEC3Q9UPP2 1182 aaPredicted RBP13.07□□□□□ -0.32
CHKB-211ENST00000489453 PTPN22Q9Y2R2 807 aa13.07□□□□□ -0.32
CHKB-211ENST00000489453 CCL15-CCL14A0A0B4J2E2 113 aa13.06□□□□□ -0.32
CHKB-211ENST00000489453 TESPA1A2RU30 521 aaPredicted RBP13.06□□□□□ -0.32
CHKB-211ENST00000489453 GTF2A2P52657 109 aa13.06□□□□□ -0.32
CHKB-211ENST00000489453 MAP3K9P80192 1104 aa13.06□□□□□ -0.32
CHKB-211ENST00000489453 CCL15Q16663 113 aa13.06□□□□□ -0.32
CHKB-211ENST00000489453 TEKT1Q969V4 418 aa13.06□□□□□ -0.32
CHKB-211ENST00000489453 HOOK2Q96ED9 719 aa13.06□□□□□ -0.32
CHKB-211ENST00000489453 OTUD5Q96G74 571 aa13.06□□□□□ -0.32
CHKB-211ENST00000489453 BICC1Q9H694 974 aaKnown RBP13.06□□□□□ -0.32
CHKB-211ENST00000489453 ZFYVE28Q9HCC9 887 aa13.06□□□□□ -0.32
CHKB-211ENST00000489453 SPINK5Q9NQ38 1064 aaPredicted RBP13.06□□□□□ -0.32
CHKB-211ENST00000489453 MAST3O60307 1309 aa13.06□□□□□ -0.32
CHKB-211ENST00000489453 NBPF7P0C2Y1 421 aaPredicted RBP13.05□□□□□ -0.32
CHKB-211ENST00000489453 VGLL4Q14135 290 aa13.05□□□□□ -0.32
CHKB-211ENST00000489453 PTPN18Q99952 460 aa13.05□□□□□ -0.32
CHKB-211ENST00000489453 TMEM106CQ9BVX2 250 aa13.05□□□□□ -0.32
CHKB-211ENST00000489453 RIPOR2Q9Y4F9 1068 aa13.05□□□□□ -0.32
CHKB-211ENST00000489453 CENPFP49454 3210 aa13.04□□□□□ -0.32
CHKB-211ENST00000489453 POTEFA5A3E0 1075 aa13.04□□□□□ -0.32
CHKB-211ENST00000489453 HDLBPQ00341 1268 aaKnown RBP13.04□□□□□ -0.32
CHKB-211ENST00000489453 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.04□□□□□ -0.32
CHKB-211ENST00000489453 FBXO33Q7Z6M2 555 aa13.04□□□□□ -0.32
CHKB-211ENST00000489453 NBPF11Q86T75 865 aa13.04□□□□□ -0.32
CHKB-211ENST00000489453 CDAN1Q8IWY9 1227 aa13.04□□□□□ -0.32
CHKB-211ENST00000489453 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
CHKB-211ENST00000489453 BRI3BPQ8WY22 251 aa13.04□□□□□ -0.32
CHKB-211ENST00000489453 TEPSINQ96N21 525 aa13.04□□□□□ -0.32
CHKB-211ENST00000489453 HTTP42858 3142 aa13.04□□□□□ -0.32
CHKB-211ENST00000489453 IFIT1P09914 478 aaKnown RBP13.03□□□□□ -0.32
CHKB-211ENST00000489453 CETPP11597 493 aa13.03□□□□□ -0.32
CHKB-211ENST00000489453 ZEB1P37275 1124 aaPredicted RBP13.03□□□□□ -0.32
CHKB-211ENST00000489453 CACNB3P54284 484 aa13.03□□□□□ -0.32
CHKB-211ENST00000489453 KIF22Q14807 665 aa13.03□□□□□ -0.32
CHKB-211ENST00000489453 SLC9C1Q4G0N8 1177 aa13.03□□□□□ -0.32
CHKB-211ENST00000489453 LRRC24Q50LG9 513 aa13.03□□□□□ -0.32
CHKB-211ENST00000489453 DCAF15Q66K64 600 aa13.03□□□□□ -0.32
CHKB-211ENST00000489453 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHKB-211ENST00000489453 ARMC5Q96C12 935 aa13.03□□□□□ -0.32
CHKB-211ENST00000489453 KAZALD1Q96I82 304 aa13.03□□□□□ -0.32
CHKB-211ENST00000489453 MS4A4AQ96JQ5 239 aa13.03□□□□□ -0.32
CHKB-211ENST00000489453 WRNIP1Q96S55 665 aa13.03□□□□□ -0.32
CHKB-211ENST00000489453 ZSWIM8A7E2V4 1837 aa13.03□□□□□ -0.32
CHKB-211ENST00000489453 UTYO14607 1347 aa13.03□□□□□ -0.32
CHKB-211ENST00000489453 SPDYE5A6NIY4 337 aa13.02□□□□□ -0.33
CHKB-211ENST00000489453 PDE8BO95263 885 aa13.02□□□□□ -0.33
CHKB-211ENST00000489453 PUM3Q15397 648 aaKnown RBP13.02□□□□□ -0.33
CHKB-211ENST00000489453 RABL6Q3YEC7 729 aaPredicted RBP13.02□□□□□ -0.33
CHKB-211ENST00000489453 ERO1BQ86YB8 467 aa13.02□□□□□ -0.33
CHKB-211ENST00000489453 ZDHHC15Q96MV8 337 aa13.02□□□□□ -0.33
CHKB-211ENST00000489453 PTPRCP08575 1304 aa13.02□□□□□ -0.33
CHKB-211ENST00000489453 DOCK2Q92608 1830 aa13.02□□□□□ -0.33
CHKB-211ENST00000489453 SLC5A1P13866 664 aa13.01□□□□□ -0.33
CHKB-211ENST00000489453 BCAMP50895 628 aa13.01□□□□□ -0.33
CHKB-211ENST00000489453 SNAPC2Q13487 334 aa13.01□□□□□ -0.33
CHKB-211ENST00000489453 GRIK5Q16478 980 aa13.01□□□□□ -0.33
CHKB-211ENST00000489453 SLC4A8Q2Y0W8 1093 aa13.01□□□□□ -0.33
CHKB-211ENST00000489453 FAM83AQ86UY5 434 aa13.01□□□□□ -0.33
CHKB-211ENST00000489453 ANKRD44Q8N8A2 993 aa13.01□□□□□ -0.33
CHKB-211ENST00000489453 SUGT1Q9Y2Z0 365 aa13.01□□□□□ -0.33
CHKB-211ENST00000489453 MYH2Q9UKX2 1941 aa13.01□□□□□ -0.33
CHKB-211ENST00000489453 KIF16BQ96L93 1317 aa13□□□□□ -0.33
CHKB-211ENST00000489453 EN2P19622 333 aaPredicted RBP13□□□□□ -0.33
CHKB-211ENST00000489453 PPIL2Q13356 520 aa13□□□□□ -0.33
CHKB-211ENST00000489453 FKBP1CQ5VVH2 108 aa13□□□□□ -0.33
CHKB-211ENST00000489453 FAM43AQ8N2R8 423 aa13□□□□□ -0.33
CHKB-211ENST00000489453 MRPL50Q8N5N7 158 aaKnown RBP13□□□□□ -0.33
CHKB-211ENST00000489453 KLHDC4Q8TBB5 520 aa13□□□□□ -0.33
CHKB-211ENST00000489453 ZKSCAN4Q969J2 545 aaPredicted RBP13□□□□□ -0.33
CHKB-211ENST00000489453 ZNF341Q9BYN7 854 aa13□□□□□ -0.33
CHKB-211ENST00000489453 PTCH2Q9Y6C5 1203 aa13□□□□□ -0.33
CHKB-211ENST00000489453 SNCAIPQ9Y6H5 919 aa13□□□□□ -0.33
CHKB-211ENST00000489453 MKI67P46013 3256 aaKnown RBP13□□□□□ -0.33
CHKB-211ENST00000489453 MGAMO43451 1857 aa12.99□□□□□ -0.33
CHKB-211ENST00000489453 RPAP1Q9BWH6 1393 aaPredicted RBP12.99□□□□□ -0.33
CHKB-211ENST00000489453 ZNF316A6NFI3 1004 aaPredicted RBP12.99□□□□□ -0.33
CHKB-211ENST00000489453 HHIPL2Q6UWX4 724 aa12.99□□□□□ -0.33
CHKB-211ENST00000489453 VGLL2Q8N8G2 317 aa12.99□□□□□ -0.33
CHKB-211ENST00000489453 WDR66Q8TBY9 1149 aa12.99□□□□□ -0.33
CHKB-211ENST00000489453 ZNF333Q96JL9 665 aa12.99□□□□□ -0.33
CHKB-211ENST00000489453 MRIQ9BWK5 157 aa12.99□□□□□ -0.33
CHKB-211ENST00000489453 ZCCHC17Q9NP64 241 aaKnown RBP12.99□□□□□ -0.33
CHKB-211ENST00000489453 BTBD19C9JJ37 291 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms