RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 TEKT1Q969V4 418 aa19.37■□□□□ 0.69
LMX1A-204ENST00000489443 DBNDD2Q9BQY9 259 aa19.37■□□□□ 0.69
LMX1A-204ENST00000489443 VEZTQ9HBM0 779 aa19.37■□□□□ 0.69
LMX1A-204ENST00000489443 ECM29Q5VYK3 1845 aa19.37■□□□□ 0.69
LMX1A-204ENST00000489443 CNTNAP1P78357 1384 aa19.36■□□□□ 0.69
LMX1A-204ENST00000489443 MAST3O60307 1309 aa19.36■□□□□ 0.69
LMX1A-204ENST00000489443 LDHBP07195 334 aaKnown RBP19.36■□□□□ 0.69
LMX1A-204ENST00000489443 HDLBPQ00341 1268 aaKnown RBP19.36■□□□□ 0.69
LMX1A-204ENST00000489443 PAXIP1Q6ZW49 1069 aaPredicted RBP19.36■□□□□ 0.69
LMX1A-204ENST00000489443 CCDC8Q9H0W5 538 aaPredicted RBP19.36■□□□□ 0.69
LMX1A-204ENST00000489443 BCL11AQ9H165 835 aa19.36■□□□□ 0.69
LMX1A-204ENST00000489443 TLL2Q9Y6L7 1015 aa19.36■□□□□ 0.69
LMX1A-204ENST00000489443 RASSF10A6NK89 507 aa19.35■□□□□ 0.69
LMX1A-204ENST00000489443 PRDX5P30044 214 aa19.35■□□□□ 0.69
LMX1A-204ENST00000489443 CCDC158Q5M9N0 1113 aa19.35■□□□□ 0.69
LMX1A-204ENST00000489443 TTC39AQ5SRH9 613 aa19.35■□□□□ 0.69
LMX1A-204ENST00000489443 C2orf69Q8N8R5 385 aa19.35■□□□□ 0.69
LMX1A-204ENST00000489443 EAF2Q96CJ1 260 aaPredicted RBP19.35■□□□□ 0.69
LMX1A-204ENST00000489443 TDRD3Q9H7E2 651 aaKnown RBP19.35■□□□□ 0.69
LMX1A-204ENST00000489443 GBA2Q9HCG7 927 aaPredicted RBP19.35■□□□□ 0.69
LMX1A-204ENST00000489443 IL1RAPL2Q9NP60 686 aa19.35■□□□□ 0.69
LMX1A-204ENST00000489443 HMG20BQ9P0W2 317 aa19.35■□□□□ 0.69
LMX1A-204ENST00000489443 ABCF2Q9UG63 623 aa19.35■□□□□ 0.69
LMX1A-204ENST00000489443 SALL1Q9NSC2 1324 aa19.34■□□□□ 0.69
LMX1A-204ENST00000489443 ZBTB22O15209 634 aa19.34■□□□□ 0.69
LMX1A-204ENST00000489443 UQCRFS1P1P0C7P4 283 aa19.34■□□□□ 0.69
LMX1A-204ENST00000489443 ARID4AP29374 1257 aaPredicted RBP19.34■□□□□ 0.69
LMX1A-204ENST00000489443 VEGFBP49765 207 aa19.34■□□□□ 0.69
LMX1A-204ENST00000489443 PI16Q6UXB8 463 aa19.34■□□□□ 0.69
LMX1A-204ENST00000489443 SAPCD2Q86UD0 394 aa19.34■□□□□ 0.69
LMX1A-204ENST00000489443 ZGPATQ8N5A5 531 aaKnown RBP19.34■□□□□ 0.69
LMX1A-204ENST00000489443 SPATA5Q8NB90 893 aa19.34■□□□□ 0.69
LMX1A-204ENST00000489443 RHPN1Q8TCX5 695 aa19.34■□□□□ 0.69
LMX1A-204ENST00000489443 CRBNQ96SW2 442 aa19.34■□□□□ 0.69
LMX1A-204ENST00000489443 MRIQ9BWK5 157 aa19.34■□□□□ 0.69
LMX1A-204ENST00000489443 DEFB129Q9H1M3 183 aa19.34■□□□□ 0.69
LMX1A-204ENST00000489443 ZNF70Q9UC06 446 aaPredicted RBP19.34■□□□□ 0.69
LMX1A-204ENST00000489443 PDS5AQ29RF7 1337 aaKnown RBP19.33■□□□□ 0.69
LMX1A-204ENST00000489443 HUNKP57058 714 aa19.33■□□□□ 0.68
LMX1A-204ENST00000489443 GRM1Q13255 1194 aa19.33■□□□□ 0.68
LMX1A-204ENST00000489443 DIXDC1Q155Q3 683 aa19.33■□□□□ 0.68
LMX1A-204ENST00000489443 SPDYE2Q495Y8 402 aa19.33■□□□□ 0.68
LMX1A-204ENST00000489443 HHIPL2Q6UWX4 724 aa19.33■□□□□ 0.68
LMX1A-204ENST00000489443 AACSQ86V21 672 aa19.33■□□□□ 0.68
LMX1A-204ENST00000489443 KIF1BPQ96EK5 621 aa19.33■□□□□ 0.68
LMX1A-204ENST00000489443 SNRKQ9NRH2 765 aa19.33■□□□□ 0.68
LMX1A-204ENST00000489443 TLR7Q9NYK1 1049 aaKnown RBP19.33■□□□□ 0.68
LMX1A-204ENST00000489443 DBNLQ9UJU6 430 aaKnown RBP19.33■□□□□ 0.68
LMX1A-204ENST00000489443 MCAMP43121 646 aa19.32■□□□□ 0.68
LMX1A-204ENST00000489443 SPTY2D1Q68D10 685 aaPredicted RBP19.32■□□□□ 0.68
LMX1A-204ENST00000489443 ZDHHC15Q96MV8 337 aa19.32■□□□□ 0.68
LMX1A-204ENST00000489443 RAB11FIP3O75154 756 aa19.31■□□□□ 0.68
LMX1A-204ENST00000489443 NF2P35240 595 aa19.31■□□□□ 0.68
LMX1A-204ENST00000489443 CYP4F22Q6NT55 531 aa19.31■□□□□ 0.68
LMX1A-204ENST00000489443 APOBEC3HQ6NTF7 200 aaKnown RBP19.31■□□□□ 0.68
LMX1A-204ENST00000489443 TBC1D9Q6ZT07 1266 aa19.31■□□□□ 0.68
LMX1A-204ENST00000489443 JMYQ8N9B5 988 aa19.31■□□□□ 0.68
LMX1A-204ENST00000489443 MYH2Q9UKX2 1941 aa19.3■□□□□ 0.68
LMX1A-204ENST00000489443 TCP10L2B9ZVM9 353 aa19.3■□□□□ 0.68
LMX1A-204ENST00000489443 TTLL12Q14166 644 aaPredicted RBP19.3■□□□□ 0.68
LMX1A-204ENST00000489443 RASA3Q14644 834 aa19.3■□□□□ 0.68
LMX1A-204ENST00000489443 ERICH6Q7L0X2 663 aa19.3■□□□□ 0.68
LMX1A-204ENST00000489443 DZIP1Q86YF9 867 aaKnown RBP19.3■□□□□ 0.68
LMX1A-204ENST00000489443 CLASRPQ8N2M8 674 aaKnown RBP19.3■□□□□ 0.68
LMX1A-204ENST00000489443 CAPNS2Q96L46 248 aa19.3■□□□□ 0.68
LMX1A-204ENST00000489443 DAGLAQ9Y4D2 1042 aa19.3■□□□□ 0.68
LMX1A-204ENST00000489443 WDR33Q9C0J8 1336 aaKnown RBP19.29■□□□□ 0.68
LMX1A-204ENST00000489443 CACNB3P54284 484 aa19.29■□□□□ 0.68
LMX1A-204ENST00000489443 TNFAIP1Q13829 316 aa19.29■□□□□ 0.68
LMX1A-204ENST00000489443 PRKG1Q13976 671 aa19.29■□□□□ 0.68
LMX1A-204ENST00000489443 MOB2Q70IA6 237 aa19.29■□□□□ 0.68
LMX1A-204ENST00000489443 TMOD2Q9NZR1 351 aa19.29■□□□□ 0.68
LMX1A-204ENST00000489443 PCDHB15Q9Y5E8 787 aa19.29■□□□□ 0.68
LMX1A-204ENST00000489443 AKAP11Q9UKA4 1901 aa19.28■□□□□ 0.68
LMX1A-204ENST00000489443 IFIT2P09913 472 aaKnown RBP19.28■□□□□ 0.68
LMX1A-204ENST00000489443 ECE1P42892 770 aa19.28■□□□□ 0.68
LMX1A-204ENST00000489443 HHIPL1Q96JK4 782 aa19.28■□□□□ 0.68
LMX1A-204ENST00000489443 ZNF512BQ96KM6 892 aaPredicted RBP19.28■□□□□ 0.68
LMX1A-204ENST00000489443 RAI14Q9P0K7 980 aa19.28■□□□□ 0.68
LMX1A-204ENST00000489443 SUPT16HQ9Y5B9 1047 aaKnown RBP19.28■□□□□ 0.68
LMX1A-204ENST00000489443 PPP2R3BQ9Y5P8 575 aa19.28■□□□□ 0.68
LMX1A-204ENST00000489443 UBE2Q2LH0YL09 131 aa19.27■□□□□ 0.68
LMX1A-204ENST00000489443 TNNI2P48788 182 aa19.27■□□□□ 0.68
LMX1A-204ENST00000489443 FKBP1BP68106 108 aa19.27■□□□□ 0.68
LMX1A-204ENST00000489443 MECOMQ03112 1051 aa19.27■□□□□ 0.68
LMX1A-204ENST00000489443 NBPF12Q5TAG4 269 aaPredicted RBP19.27■□□□□ 0.68
LMX1A-204ENST00000489443 SLF2Q8IX21 1173 aa19.27■□□□□ 0.68
LMX1A-204ENST00000489443 LRP2BPQ9P2M1 347 aa19.27■□□□□ 0.68
LMX1A-204ENST00000489443 SMARCA5O60264 1052 aaPredicted RBP19.26■□□□□ 0.67
LMX1A-204ENST00000489443 ZAP70P43403 619 aa19.26■□□□□ 0.67
LMX1A-204ENST00000489443 ZNF157P51786 506 aaPredicted RBP19.26■□□□□ 0.67
LMX1A-204ENST00000489443 SUPT20HL1Q3ZLR7 823 aa19.26■□□□□ 0.67
LMX1A-204ENST00000489443 RGMBQ6NW40 437 aa19.26■□□□□ 0.67
LMX1A-204ENST00000489443 CDC42EP5Q6NZY7 148 aa19.26■□□□□ 0.67
LMX1A-204ENST00000489443 LRRCC1Q9C099 1032 aa19.26■□□□□ 0.67
LMX1A-204ENST00000489443 TMEM39BQ9GZU3 492 aa19.26■□□□□ 0.67
LMX1A-204ENST00000489443 USP40Q9NVE5 1235 aa19.26■□□□□ 0.67
LMX1A-204ENST00000489443 PAPPA2Q9BXP8 1791 aa19.26■□□□□ 0.67
LMX1A-204ENST00000489443 AOC2O75106 756 aa19.25■□□□□ 0.67
LMX1A-204ENST00000489443 CYP2E1P05181 493 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms