RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 ZC3H12CQ9C0D7 883 aaKnown RBP13.77□□□□□ -0.21
C9orf3-220ENST00000489318 PIM2Q9P1W9 311 aa13.77□□□□□ -0.21
C9orf3-220ENST00000489318 ABCF2Q9UG63 623 aa13.77□□□□□ -0.21
C9orf3-220ENST00000489318 SNX14Q9Y5W7 946 aa13.77□□□□□ -0.21
C9orf3-220ENST00000489318 COL4A5P29400 1685 aa13.76□□□□□ -0.21
C9orf3-220ENST00000489318 PRDX5P30044 214 aa13.76□□□□□ -0.21
C9orf3-220ENST00000489318 KIAA2012Q0VF49 1180 aa13.76□□□□□ -0.21
C9orf3-220ENST00000489318 CHAF1AQ13111 956 aaPredicted RBP13.76□□□□□ -0.21
C9orf3-220ENST00000489318 VPS53Q5VIR6 699 aa13.76□□□□□ -0.21
C9orf3-220ENST00000489318 CREB3L3Q68CJ9 461 aa13.76□□□□□ -0.21
C9orf3-220ENST00000489318 PODNQ7Z5L7 613 aa13.76□□□□□ -0.21
C9orf3-220ENST00000489318 ADGRA1Q86SQ6 560 aa13.76□□□□□ -0.21
C9orf3-220ENST00000489318 RTKN2Q8IZC4 609 aa13.76□□□□□ -0.21
C9orf3-220ENST00000489318 VPS33BQ9H267 617 aa13.76□□□□□ -0.21
C9orf3-220ENST00000489318 RAI14Q9P0K7 980 aa13.76□□□□□ -0.21
C9orf3-220ENST00000489318 NAV1Q8NEY1 1877 aa13.76□□□□□ -0.21
C9orf3-220ENST00000489318 SLC27A2O14975 620 aa13.75□□□□□ -0.21
C9orf3-220ENST00000489318 C21orf2O43822 256 aa13.75□□□□□ -0.21
C9orf3-220ENST00000489318 MECOMQ03112 1051 aa13.75□□□□□ -0.21
C9orf3-220ENST00000489318 RNF20Q5VTR2 975 aa13.75□□□□□ -0.21
C9orf3-220ENST00000489318 RASEFQ8IZ41 740 aa13.75□□□□□ -0.21
C9orf3-220ENST00000489318 STRBPQ96SI9 672 aaKnown RBP13.75□□□□□ -0.21
C9orf3-220ENST00000489318 RIOK1Q9BRS2 568 aaKnown RBP13.75□□□□□ -0.21
C9orf3-220ENST00000489318 TM6SF1Q9BZW5 370 aa13.75□□□□□ -0.21
C9orf3-220ENST00000489318 SUGT1Q9Y2Z0 365 aa13.75□□□□□ -0.21
C9orf3-220ENST00000489318 ECM29Q5VYK3 1845 aa13.75□□□□□ -0.21
C9orf3-220ENST00000489318 ADAMTSL1Q8N6G6 1762 aa13.75□□□□□ -0.21
C9orf3-220ENST00000489318 GNAT2P19087 354 aa13.74□□□□□ -0.21
C9orf3-220ENST00000489318 FKBP1AP62942 108 aaKnown RBP13.74□□□□□ -0.21
C9orf3-220ENST00000489318 NAA16Q6N069 864 aaPredicted RBP13.74□□□□□ -0.21
C9orf3-220ENST00000489318 AIDAQ96BJ3 306 aa13.74□□□□□ -0.21
C9orf3-220ENST00000489318 SPON1Q9HCB6 807 aa13.74□□□□□ -0.21
C9orf3-220ENST00000489318 LTBP3Q9NS15 1303 aa13.73□□□□□ -0.21
C9orf3-220ENST00000489318 RIMBP2O15034 1052 aa13.73□□□□□ -0.21
C9orf3-220ENST00000489318 MBD4O95243 580 aa13.73□□□□□ -0.21
C9orf3-220ENST00000489318 LDHBP07195 334 aaKnown RBP13.73□□□□□ -0.21
C9orf3-220ENST00000489318 CYP21A2P08686 494 aa13.73□□□□□ -0.21
C9orf3-220ENST00000489318 ZKSCAN1P17029 563 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-220ENST00000489318 CYP7A1P22680 504 aa13.73□□□□□ -0.21
C9orf3-220ENST00000489318 BECN1Q14457 450 aa13.73□□□□□ -0.21
C9orf3-220ENST00000489318 ALX1Q15699 326 aa13.73□□□□□ -0.21
C9orf3-220ENST00000489318 DALRD3Q5D0E6 543 aaKnown RBP13.73□□□□□ -0.21
C9orf3-220ENST00000489318 LCORLQ8N3X6 602 aa13.73□□□□□ -0.21
C9orf3-220ENST00000489318 TBC1D2Q9BYX2 928 aa13.73□□□□□ -0.21
C9orf3-220ENST00000489318 GAKO14976 1311 aa13.72□□□□□ -0.21
C9orf3-220ENST00000489318 ECE2O60344 883 aa13.72□□□□□ -0.21
C9orf3-220ENST00000489318 GSTO1P78417 241 aa13.72□□□□□ -0.21
C9orf3-220ENST00000489318 KRT32Q14532 448 aa13.72□□□□□ -0.21
C9orf3-220ENST00000489318 MFSD14BQ5SR56 506 aa13.72□□□□□ -0.21
C9orf3-220ENST00000489318 DZIP1Q86YF9 867 aaKnown RBP13.72□□□□□ -0.21
C9orf3-220ENST00000489318 CERS3Q8IU89 383 aa13.72□□□□□ -0.21
C9orf3-220ENST00000489318 EPB41L4AQ9HCS5 686 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-220ENST00000489318 ZNF219Q9P2Y4 722 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-220ENST00000489318 CTNNA3Q9UI47 895 aa13.72□□□□□ -0.21
C9orf3-220ENST00000489318 JAG2Q9Y219 1238 aa13.72□□□□□ -0.21
C9orf3-220ENST00000489318 BAZ2AQ9UIF9 1905 aaKnown RBP13.72□□□□□ -0.21
C9orf3-220ENST00000489318 DICER1Q9UPY3 1922 aaKnown RBP13.72□□□□□ -0.21
C9orf3-220ENST00000489318 MROH7-TTC4A0A0A0MT08 1334 aa13.71□□□□□ -0.21
C9orf3-220ENST00000489318 MAGEB6P1A0A0J9YX57 407 aa13.71□□□□□ -0.21
C9orf3-220ENST00000489318 PATL2C9JE40 543 aaKnown RBP13.71□□□□□ -0.21
C9orf3-220ENST00000489318 ST18O60284 1047 aa13.71□□□□□ -0.21
C9orf3-220ENST00000489318 CD2BP2O95400 341 aaKnown RBP13.71□□□□□ -0.21
C9orf3-220ENST00000489318 GTF2IP78347 998 aa13.71□□□□□ -0.21
C9orf3-220ENST00000489318 GRIK5Q16478 980 aa13.71□□□□□ -0.21
C9orf3-220ENST00000489318 AOC3Q16853 763 aa13.71□□□□□ -0.21
C9orf3-220ENST00000489318 ADCK5Q3MIX3 580 aa13.71□□□□□ -0.21
C9orf3-220ENST00000489318 STRIP1Q5VSL9 837 aa13.71□□□□□ -0.21
C9orf3-220ENST00000489318 FAM163AQ96GL9 167 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-220ENST00000489318 TTC14Q96N46 770 aa13.71□□□□□ -0.21
C9orf3-220ENST00000489318 ARMT1Q9H993 441 aa13.71□□□□□ -0.21
C9orf3-220ENST00000489318 ZSWIM6Q9HCJ5 1215 aa13.71□□□□□ -0.21
C9orf3-220ENST00000489318 GSG1L2A8MUP6 293 aa13.7□□□□□ -0.22
C9orf3-220ENST00000489318 PPIP5K2O43314 1243 aa13.7□□□□□ -0.22
C9orf3-220ENST00000489318 FGAP02671 866 aa13.7□□□□□ -0.22
C9orf3-220ENST00000489318 PPP4CP60510 307 aa13.7□□□□□ -0.22
C9orf3-220ENST00000489318 DOK7Q18PE1 504 aa13.7□□□□□ -0.22
C9orf3-220ENST00000489318 GIMAP6Q6P9H5 292 aa13.7□□□□□ -0.22
C9orf3-220ENST00000489318 HSCBQ8IWL3 235 aa13.7□□□□□ -0.22
C9orf3-220ENST00000489318 CERS5Q8N5B7 392 aa13.7□□□□□ -0.22
C9orf3-220ENST00000489318 MIGA1Q8NAN2 632 aa13.7□□□□□ -0.22
C9orf3-220ENST00000489318 DBNDD1Q9H9R9 158 aa13.7□□□□□ -0.22
C9orf3-220ENST00000489318 TAF6LQ9Y6J9 622 aa13.7□□□□□ -0.22
C9orf3-220ENST00000489318 LDHCP07864 332 aa13.69□□□□□ -0.22
C9orf3-220ENST00000489318 PSMA5P28066 241 aa13.69□□□□□ -0.22
C9orf3-220ENST00000489318 MCM2P49736 904 aa13.69□□□□□ -0.22
C9orf3-220ENST00000489318 IMMTQ16891 758 aaKnown RBP13.69□□□□□ -0.22
C9orf3-220ENST00000489318 DACT2Q5SW24 774 aa13.69□□□□□ -0.22
C9orf3-220ENST00000489318 TTLL5Q6EMB2 1281 aa13.69□□□□□ -0.22
C9orf3-220ENST00000489318 STOX1Q6ZVD7 989 aa13.69□□□□□ -0.22
C9orf3-220ENST00000489318 SLF2Q8IX21 1173 aa13.69□□□□□ -0.22
C9orf3-220ENST00000489318 IFNL3Q8IZI9 196 aa13.69□□□□□ -0.22
C9orf3-220ENST00000489318 NLGN2Q8NFZ4 835 aa13.69□□□□□ -0.22
C9orf3-220ENST00000489318 GPR75-ASB3A0A0A6YYF3 556 aa13.68□□□□□ -0.22
C9orf3-220ENST00000489318 YDJCA8MPS7 323 aa13.68□□□□□ -0.22
C9orf3-220ENST00000489318 K7ELQ4 463 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-220ENST00000489318 NFKBIEO00221 500 aa13.68□□□□□ -0.22
C9orf3-220ENST00000489318 CASTP20810 708 aaKnown RBP13.68□□□□□ -0.22
C9orf3-220ENST00000489318 NEK4P51957 841 aa13.68□□□□□ -0.22
C9orf3-220ENST00000489318 DIXDC1Q155Q3 683 aa13.68□□□□□ -0.22
C9orf3-220ENST00000489318 RUFY3Q7L099 469 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms