RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 NPHP3Q7Z494 1330 aa8.31□□□□□ -1.08
PDCD4-209ENST00000489049 NCAPD2Q15021 1401 aa8.31□□□□□ -1.08
PDCD4-209ENST00000489049 GCP02774 474 aa8.31□□□□□ -1.08
PDCD4-209ENST00000489049 HOXB4P17483 251 aaPredicted RBP8.31□□□□□ -1.08
PDCD4-209ENST00000489049 SMTNP53814 917 aa8.31□□□□□ -1.08
PDCD4-209ENST00000489049 FLIIQ13045 1269 aa8.31□□□□□ -1.08
PDCD4-209ENST00000489049 TAF7Q15545 349 aaPredicted RBP8.31□□□□□ -1.08
PDCD4-209ENST00000489049 MTHFSDQ2M296 383 aaKnown RBP8.31□□□□□ -1.08
PDCD4-209ENST00000489049 INTS3Q68E01 1043 aaKnown RBP8.31□□□□□ -1.08
PDCD4-209ENST00000489049 ARHGEF25Q86VW2 580 aa8.31□□□□□ -1.08
PDCD4-209ENST00000489049 ITPRIPQ8IWB1 547 aa8.31□□□□□ -1.08
PDCD4-209ENST00000489049 GCC1Q96CN9 775 aa8.31□□□□□ -1.08
PDCD4-209ENST00000489049 IPO9Q96P70 1041 aaKnown RBP8.31□□□□□ -1.08
PDCD4-209ENST00000489049 BCL2L13Q9BXK5 485 aa8.31□□□□□ -1.08
PDCD4-209ENST00000489049 NIFKQ9BYG3 293 aaKnown RBP8.31□□□□□ -1.08
PDCD4-209ENST00000489049 ZCCHC2Q9C0B9 1178 aaKnown RBP8.31□□□□□ -1.08
PDCD4-209ENST00000489049 GGA1Q9UJY5 639 aa8.31□□□□□ -1.08
PDCD4-209ENST00000489049 MSH6P52701 1360 aa8.31□□□□□ -1.08
PDCD4-209ENST00000489049 DLG5Q8TDM6 1919 aa8.31□□□□□ -1.08
PDCD4-209ENST00000489049 KRBA1A5PL33 1030 aa8.3□□□□□ -1.08
PDCD4-209ENST00000489049 ZBTB7BO15156 539 aaPredicted RBP8.3□□□□□ -1.08
PDCD4-209ENST00000489049 ADAM23O75077 832 aa8.3□□□□□ -1.08
PDCD4-209ENST00000489049 IGHDP01880 384 aa8.3□□□□□ -1.08
PDCD4-209ENST00000489049 COL8A1P27658 744 aa8.3□□□□□ -1.08
PDCD4-209ENST00000489049 SEMA3FQ13275 785 aa8.3□□□□□ -1.08
PDCD4-209ENST00000489049 CCDC30Q5VVM6 783 aa8.3□□□□□ -1.08
PDCD4-209ENST00000489049 ALYREFQ86V81 257 aaKnown RBP8.3□□□□□ -1.08
PDCD4-209ENST00000489049 NLRP8Q86W28 1048 aa8.3□□□□□ -1.08
PDCD4-209ENST00000489049 SMC5Q8IY18 1101 aa8.3□□□□□ -1.08
PDCD4-209ENST00000489049 TMEM57Q8N5G2 664 aa8.3□□□□□ -1.08
PDCD4-209ENST00000489049 C8orf58Q8NAV2 365 aa8.3□□□□□ -1.08
PDCD4-209ENST00000489049 PCDHGC4Q9Y5F7 938 aa8.3□□□□□ -1.08
PDCD4-209ENST00000489049 MARF1Q9Y4F3 1742 aaKnown RBP8.29□□□□□ -1.08
PDCD4-209ENST00000489049 TMEM229AB2RXF0 380 aa8.29□□□□□ -1.08
PDCD4-209ENST00000489049 FOXO3O43524 673 aa8.29□□□□□ -1.08
PDCD4-209ENST00000489049 ARAFP10398 606 aa8.29□□□□□ -1.08
PDCD4-209ENST00000489049 SOX11P35716 441 aa8.29□□□□□ -1.08
PDCD4-209ENST00000489049 CCT4P50991 539 aaKnown RBP8.29□□□□□ -1.08
PDCD4-209ENST00000489049 RPAP2Q8IXW5 612 aaPredicted RBP8.29□□□□□ -1.08
PDCD4-209ENST00000489049 ZNF295-AS1Q8N0V1 137 aa8.29□□□□□ -1.08
PDCD4-209ENST00000489049 AIDAQ96BJ3 306 aa8.29□□□□□ -1.08
PDCD4-209ENST00000489049 STK31Q9BXU1 1019 aa8.29□□□□□ -1.08
PDCD4-209ENST00000489049 TSPYL4Q9UJ04 414 aa8.29□□□□□ -1.08
PDCD4-209ENST00000489049 TMEM94Q12767 1356 aa8.29□□□□□ -1.08
PDCD4-209ENST00000489049 CEMIPQ8WUJ3 1361 aa8.28□□□□□ -1.08
PDCD4-209ENST00000489049 EPXP11678 715 aa8.28□□□□□ -1.08
PDCD4-209ENST00000489049 AMPD1P23109 780 aa8.28□□□□□ -1.08
PDCD4-209ENST00000489049 MTFR1Q15390 333 aa8.28□□□□□ -1.08
PDCD4-209ENST00000489049 AKAP4Q5JQC9 854 aa8.28□□□□□ -1.08
PDCD4-209ENST00000489049 LINC00114Q6XXX2 140 aa8.28□□□□□ -1.08
PDCD4-209ENST00000489049 SLC4A9Q96Q91 983 aa8.28□□□□□ -1.08
PDCD4-209ENST00000489049 ORAI2Q96SN7 254 aa8.28□□□□□ -1.08
PDCD4-209ENST00000489049 THUMPD2Q9BTF0 503 aaKnown RBP8.28□□□□□ -1.08
PDCD4-209ENST00000489049 UPF2Q9HAU5 1272 aaKnown RBP8.28□□□□□ -1.08
PDCD4-209ENST00000489049 SERTAD1Q9UHV2 236 aa8.28□□□□□ -1.08
PDCD4-209ENST00000489049 HDAC5Q9UQL6 1122 aa8.28□□□□□ -1.08
PDCD4-209ENST00000489049 CACNA1FO60840 1977 aa8.28□□□□□ -1.08
PDCD4-209ENST00000489049 CPDO75976 1380 aa8.27□□□□□ -1.09
PDCD4-209ENST00000489049 ATXN7O15265 892 aaPredicted RBP8.27□□□□□ -1.09
PDCD4-209ENST00000489049 MCM10Q7L590 875 aa8.27□□□□□ -1.09
PDCD4-209ENST00000489049 TSPYL6Q8N831 410 aa8.27□□□□□ -1.09
PDCD4-209ENST00000489049 IQSEC3Q9UPP2 1182 aaPredicted RBP8.27□□□□□ -1.09
PDCD4-209ENST00000489049 MED1Q15648 1581 aaPredicted RBP8.27□□□□□ -1.09
PDCD4-209ENST00000489049 TRPM3Q9HCF6 1732 aaPredicted RBP8.26□□□□□ -1.09
PDCD4-209ENST00000489049 LRRC37A3O60309 1634 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 A0A1W2PNR3 127 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 FAM83GA6ND36 823 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 A6NJY4 79 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 NEURL1BA8MQ27 555 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 PIK3CDO00329 1044 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 CDK2AP1O14519 115 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 HMMRO75330 724 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 NUCB1Q02818 461 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 GRIN2CQ14957 1233 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 C1orf141Q5JVX7 400 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 NUTM2GQ5VZR2 741 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 BTBD6Q96KE9 485 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 ANP32EQ9BTT0 268 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 SUV39H2Q9H5I1 410 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 HCN2Q9UL51 889 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 NOP58Q9Y2X3 529 aaKnown RBP8.26□□□□□ -1.09
PDCD4-209ENST00000489049 USP3Q9Y6I4 520 aa8.26□□□□□ -1.09
PDCD4-209ENST00000489049 LTN1O94822 1766 aa8.25□□□□□ -1.09
PDCD4-209ENST00000489049 IBTKQ9P2D0 1353 aaPredicted RBP8.25□□□□□ -1.09
PDCD4-209ENST00000489049 DCDC2BA2VCK2 349 aa8.25□□□□□ -1.09
PDCD4-209ENST00000489049 PIK3R2O00459 728 aa8.25□□□□□ -1.09
PDCD4-209ENST00000489049 RAD21O60216 631 aa8.25□□□□□ -1.09
PDCD4-209ENST00000489049 GNAI3P08754 354 aa8.25□□□□□ -1.09
PDCD4-209ENST00000489049 MAPTP10636 758 aaKnown RBP8.25□□□□□ -1.09
PDCD4-209ENST00000489049 DGKGP49619 791 aa8.25□□□□□ -1.09
PDCD4-209ENST00000489049 TNP2Q05952 138 aa8.25□□□□□ -1.09
PDCD4-209ENST00000489049 DCTN1Q14203 1278 aa8.25□□□□□ -1.09
PDCD4-209ENST00000489049 C8orf34Q49A92 452 aa8.25□□□□□ -1.09
PDCD4-209ENST00000489049 ARSJQ5FYB0 599 aaPredicted RBP8.25□□□□□ -1.09
PDCD4-209ENST00000489049 FAM182BQ5T319 152 aa8.25□□□□□ -1.09
PDCD4-209ENST00000489049 NBPF6Q5VWK0 638 aa8.25□□□□□ -1.09
PDCD4-209ENST00000489049 IL17REQ8NFR9 667 aa8.25□□□□□ -1.09
PDCD4-209ENST00000489049 ANKRD24Q8TF21 1146 aa8.25□□□□□ -1.09
PDCD4-209ENST00000489049 NBPF4Q96M43 638 aa8.25□□□□□ -1.09
PDCD4-209ENST00000489049 ZDHHC3Q9NYG2 299 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms