RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 ZNF532Q9HCE3 1301 aa19.31■□□□□ 0.68
CLDN11-208ENST00000488989 LDHBP07195 334 aaKnown RBP19.31■□□□□ 0.68
CLDN11-208ENST00000488989 GRIK5Q16478 980 aa19.31■□□□□ 0.68
CLDN11-208ENST00000488989 MCMDC2Q4G0Z9 681 aa19.31■□□□□ 0.68
CLDN11-208ENST00000488989 ARHGAP27Q6ZUM4 889 aa19.31■□□□□ 0.68
CLDN11-208ENST00000488989 CERS5Q8N5B7 392 aa19.31■□□□□ 0.68
CLDN11-208ENST00000488989 MAGEB6Q8N7X4 407 aa19.31■□□□□ 0.68
CLDN11-208ENST00000488989 RAI14Q9P0K7 980 aa19.31■□□□□ 0.68
CLDN11-208ENST00000488989 EPB41L2O43491 1005 aaKnown RBP19.3■□□□□ 0.68
CLDN11-208ENST00000488989 MECOMQ03112 1051 aa19.3■□□□□ 0.68
CLDN11-208ENST00000488989 SLFNL1Q499Z3 407 aa19.3■□□□□ 0.68
CLDN11-208ENST00000488989 JDP2Q8WYK2 163 aa19.3■□□□□ 0.68
CLDN11-208ENST00000488989 OSBP2Q969R2 916 aa19.3■□□□□ 0.68
CLDN11-208ENST00000488989 MAST3O60307 1309 aa19.29■□□□□ 0.68
CLDN11-208ENST00000488989 VIL1P09327 827 aaKnown RBP19.29■□□□□ 0.68
CLDN11-208ENST00000488989 LMNB1P20700 586 aa19.29■□□□□ 0.68
CLDN11-208ENST00000488989 FZD9O00144 591 aa19.28■□□□□ 0.68
CLDN11-208ENST00000488989 REC8O95072 547 aa19.28■□□□□ 0.68
CLDN11-208ENST00000488989 NAA16Q6N069 864 aaPredicted RBP19.28■□□□□ 0.68
CLDN11-208ENST00000488989 FAM163AQ96GL9 167 aaPredicted RBP19.28■□□□□ 0.68
CLDN11-208ENST00000488989 SEC62Q99442 399 aaKnown RBP19.28■□□□□ 0.68
CLDN11-208ENST00000488989 PUS7LQ9H0K6 701 aaKnown RBP19.28■□□□□ 0.68
CLDN11-208ENST00000488989 MYO3BQ8WXR4 1341 aa19.27■□□□□ 0.68
CLDN11-208ENST00000488989 M0R2C6 588 aa19.27■□□□□ 0.68
CLDN11-208ENST00000488989 CYP7A1P22680 504 aa19.27■□□□□ 0.68
CLDN11-208ENST00000488989 GSTO1P78417 241 aa19.27■□□□□ 0.68
CLDN11-208ENST00000488989 CXCL9Q07325 125 aa19.27■□□□□ 0.68
CLDN11-208ENST00000488989 ZNF589Q86UQ0 364 aaPredicted RBP19.27■□□□□ 0.68
CLDN11-208ENST00000488989 DZIP1Q86YF9 867 aaKnown RBP19.27■□□□□ 0.68
CLDN11-208ENST00000488989 FBXW7Q969H0 707 aa19.27■□□□□ 0.68
CLDN11-208ENST00000488989 MRIQ9BWK5 157 aa19.27■□□□□ 0.68
CLDN11-208ENST00000488989 TIAM2Q8IVF5 1701 aa19.27■□□□□ 0.68
CLDN11-208ENST00000488989 CCDC171Q6TFL3 1326 aa19.26■□□□□ 0.67
CLDN11-208ENST00000488989 PSMD14O00487 310 aa19.26■□□□□ 0.67
CLDN11-208ENST00000488989 GRIN3BO60391 1043 aa19.26■□□□□ 0.67
CLDN11-208ENST00000488989 LDHCP07864 332 aa19.26■□□□□ 0.67
CLDN11-208ENST00000488989 MFAP1P55081 439 aaKnown RBP19.26■□□□□ 0.67
CLDN11-208ENST00000488989 RSBN1LQ6PCB5 846 aaPredicted RBP19.26■□□□□ 0.67
CLDN11-208ENST00000488989 ADGRA1Q86SQ6 560 aa19.26■□□□□ 0.67
CLDN11-208ENST00000488989 GMLQ99445 158 aa19.26■□□□□ 0.67
CLDN11-208ENST00000488989 MXD3Q9BW11 206 aa19.26■□□□□ 0.67
CLDN11-208ENST00000488989 LSG1Q9H089 658 aaKnown RBP19.26■□□□□ 0.67
CLDN11-208ENST00000488989 CDK5RAP2Q96SN8 1893 aa19.26■□□□□ 0.67
CLDN11-208ENST00000488989 GAKO14976 1311 aa19.25■□□□□ 0.67
CLDN11-208ENST00000488989 RAD17O75943 681 aa19.25■□□□□ 0.67
CLDN11-208ENST00000488989 HDLBPQ00341 1268 aaKnown RBP19.25■□□□□ 0.67
CLDN11-208ENST00000488989 CIAPIN1Q6FI81 312 aa19.25■□□□□ 0.67
CLDN11-208ENST00000488989 SLF2Q8IX21 1173 aa19.25■□□□□ 0.67
CLDN11-208ENST00000488989 SRCAPQ6ZRS2 3230 aa19.25■□□□□ 0.67
CLDN11-208ENST00000488989 MROH7-TTC4A0A0A0MT08 1334 aa19.25■□□□□ 0.67
CLDN11-208ENST00000488989 GPAA1O43292 621 aa19.24■□□□□ 0.67
CLDN11-208ENST00000488989 PPP4CP60510 307 aa19.24■□□□□ 0.67
CLDN11-208ENST00000488989 GPR162Q16538 588 aa19.24■□□□□ 0.67
CLDN11-208ENST00000488989 CCDC129Q6ZRS4 1044 aa19.24■□□□□ 0.67
CLDN11-208ENST00000488989 AGBL3Q8NEM8 1001 aa19.24■□□□□ 0.67
CLDN11-208ENST00000488989 RIOK1Q9BRS2 568 aaKnown RBP19.24■□□□□ 0.67
CLDN11-208ENST00000488989 USP26Q9BXU7 913 aa19.24■□□□□ 0.67
CLDN11-208ENST00000488989 TTF2Q9UNY4 1162 aaKnown RBP19.24■□□□□ 0.67
CLDN11-208ENST00000488989 ADAMTSL1Q8N6G6 1762 aa19.24■□□□□ 0.67
CLDN11-208ENST00000488989 FOCADQ5VW36 1801 aa19.23■□□□□ 0.67
CLDN11-208ENST00000488989 ECM29Q5VYK3 1845 aa19.23■□□□□ 0.67
CLDN11-208ENST00000488989 TNIP1Q15025 636 aa19.23■□□□□ 0.67
CLDN11-208ENST00000488989 HHIPL2Q6UWX4 724 aa19.23■□□□□ 0.67
CLDN11-208ENST00000488989 STRBPQ96SI9 672 aaKnown RBP19.23■□□□□ 0.67
CLDN11-208ENST00000488989 ANO2Q9NQ90 1003 aa19.23■□□□□ 0.67
CLDN11-208ENST00000488989 GPR75-ASB3A0A0A6YYF3 556 aa19.22■□□□□ 0.67
CLDN11-208ENST00000488989 MMP14P50281 582 aa19.22■□□□□ 0.67
CLDN11-208ENST00000488989 EIF6P56537 245 aaKnown RBP19.22■□□□□ 0.67
CLDN11-208ENST00000488989 DIXDC1Q155Q3 683 aa19.22■□□□□ 0.67
CLDN11-208ENST00000488989 KIAA1211Q6ZU35 1233 aa19.22■□□□□ 0.67
CLDN11-208ENST00000488989 CERS3Q8IU89 383 aa19.22■□□□□ 0.67
CLDN11-208ENST00000488989 MAP4K1Q92918 833 aa19.22■□□□□ 0.67
CLDN11-208ENST00000488989 AIDAQ96BJ3 306 aa19.22■□□□□ 0.67
CLDN11-208ENST00000488989 DSCC1Q9BVC3 393 aa19.22■□□□□ 0.67
CLDN11-208ENST00000488989 RPAP1Q9BWH6 1393 aaPredicted RBP19.21■□□□□ 0.67
CLDN11-208ENST00000488989 MAGEB6P1A0A0J9YX57 407 aa19.21■□□□□ 0.67
CLDN11-208ENST00000488989 MBD4O95243 580 aa19.21■□□□□ 0.67
CLDN11-208ENST00000488989 GNAT2P19087 354 aa19.21■□□□□ 0.67
CLDN11-208ENST00000488989 RPS12P25398 132 aaKnown RBP19.21■□□□□ 0.67
CLDN11-208ENST00000488989 PTH1RQ03431 593 aa19.21■□□□□ 0.67
CLDN11-208ENST00000488989 UPF2Q9HAU5 1272 aaKnown RBP19.21■□□□□ 0.67
CLDN11-208ENST00000488989 FOXP2O15409 715 aa19.2■□□□□ 0.66
CLDN11-208ENST00000488989 HSPD1P10809 573 aaKnown RBP19.2■□□□□ 0.66
CLDN11-208ENST00000488989 KIAA0825Q8IV33 1275 aa19.2■□□□□ 0.66
CLDN11-208ENST00000488989 LCORLQ8N3X6 602 aa19.2■□□□□ 0.66
CLDN11-208ENST00000488989 MIGA1Q8NAN2 632 aa19.2■□□□□ 0.66
CLDN11-208ENST00000488989 ARMT1Q9H993 441 aa19.2■□□□□ 0.66
CLDN11-208ENST00000488989 SERPINA10Q9UK55 444 aa19.2■□□□□ 0.66
CLDN11-208ENST00000488989 DAGLAQ9Y4D2 1042 aa19.2■□□□□ 0.66
CLDN11-208ENST00000488989 ZNF541Q9H0D2 1346 aa19.2■□□□□ 0.66
CLDN11-208ENST00000488989 LAMA4Q16363 1823 aa19.19■□□□□ 0.66
CLDN11-208ENST00000488989 F8W031 263 aaPredicted RBP19.19■□□□□ 0.66
CLDN11-208ENST00000488989 BAG3O95817 575 aa19.19■□□□□ 0.66
CLDN11-208ENST00000488989 CRKP46108 304 aa19.19■□□□□ 0.66
CLDN11-208ENST00000488989 RBM25P49756 843 aaKnown RBP19.19■□□□□ 0.66
CLDN11-208ENST00000488989 DYNLL1P63167 89 aaKnown RBP19.19■□□□□ 0.66
CLDN11-208ENST00000488989 VPS53Q5VIR6 699 aa19.19■□□□□ 0.66
CLDN11-208ENST00000488989 C9orf131Q5VYM1 1079 aa19.19■□□□□ 0.66
CLDN11-208ENST00000488989 TEKT1Q969V4 418 aa19.19■□□□□ 0.66
CLDN11-208ENST00000488989 ZDHHC15Q96MV8 337 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms