RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 MAP3K9P80192 1104 aa13.65□□□□□ -0.22
YIPF3-207ENST00000488966 HABP4Q5JVS0 413 aaKnown RBP13.65□□□□□ -0.22
YIPF3-207ENST00000488966 TMEM39BQ9GZU3 492 aa13.65□□□□□ -0.22
YIPF3-207ENST00000488966 SPINK5Q9NQ38 1064 aaPredicted RBP13.65□□□□□ -0.22
YIPF3-207ENST00000488966 C9orf78Q9NZ63 289 aaPredicted RBP13.65□□□□□ -0.22
YIPF3-207ENST00000488966 CCL15-CCL14A0A0B4J2E2 113 aa13.64□□□□□ -0.23
YIPF3-207ENST00000488966 CCL15Q16663 113 aa13.64□□□□□ -0.23
YIPF3-207ENST00000488966 FAM43AQ8N2R8 423 aa13.64□□□□□ -0.23
YIPF3-207ENST00000488966 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.64□□□□□ -0.23
YIPF3-207ENST00000488966 KAZALD1Q96I82 304 aa13.64□□□□□ -0.23
YIPF3-207ENST00000488966 SUCLG2Q96I99 432 aa13.64□□□□□ -0.23
YIPF3-207ENST00000488966 ALDH1L1O75891 902 aa13.63□□□□□ -0.23
YIPF3-207ENST00000488966 GTF2A2P52657 109 aa13.63□□□□□ -0.23
YIPF3-207ENST00000488966 TAF1CQ15572 869 aaPredicted RBP13.63□□□□□ -0.23
YIPF3-207ENST00000488966 SLC4A10Q6U841 1118 aa13.63□□□□□ -0.23
YIPF3-207ENST00000488966 FBXO33Q7Z6M2 555 aa13.63□□□□□ -0.23
YIPF3-207ENST00000488966 OTUD5Q96G74 571 aa13.63□□□□□ -0.23
YIPF3-207ENST00000488966 ZNF333Q96JL9 665 aa13.63□□□□□ -0.23
YIPF3-207ENST00000488966 ZFYVE28Q9HCC9 887 aa13.63□□□□□ -0.23
YIPF3-207ENST00000488966 MRS2Q9HD23 443 aa13.63□□□□□ -0.23
YIPF3-207ENST00000488966 IQSEC3Q9UPP2 1182 aaPredicted RBP13.63□□□□□ -0.23
YIPF3-207ENST00000488966 RIPOR2Q9Y4F9 1068 aa13.63□□□□□ -0.23
YIPF3-207ENST00000488966 PTCH2Q9Y6C5 1203 aa13.63□□□□□ -0.23
YIPF3-207ENST00000488966 A0A1B0GUL6 1792 aa13.63□□□□□ -0.23
YIPF3-207ENST00000488966 NBPF7P0C2Y1 421 aaPredicted RBP13.62□□□□□ -0.23
YIPF3-207ENST00000488966 TNNI2P48788 182 aa13.62□□□□□ -0.23
YIPF3-207ENST00000488966 CACNB3P54284 484 aa13.62□□□□□ -0.23
YIPF3-207ENST00000488966 CHAF1AQ13111 956 aaPredicted RBP13.62□□□□□ -0.23
YIPF3-207ENST00000488966 TMEM106CQ9BVX2 250 aa13.62□□□□□ -0.23
YIPF3-207ENST00000488966 CSADQ9Y600 493 aa13.62□□□□□ -0.23
YIPF3-207ENST00000488966 ECM29Q5VYK3 1845 aa13.62□□□□□ -0.23
YIPF3-207ENST00000488966 MKI67P46013 3256 aaKnown RBP13.61□□□□□ -0.23
YIPF3-207ENST00000488966 LAMB1P07942 1786 aa13.61□□□□□ -0.23
YIPF3-207ENST00000488966 SPDYE5A6NIY4 337 aa13.61□□□□□ -0.23
YIPF3-207ENST00000488966 SLC9C1Q4G0N8 1177 aa13.61□□□□□ -0.23
YIPF3-207ENST00000488966 SRCIN1Q9C0H9 1055 aa13.61□□□□□ -0.23
YIPF3-207ENST00000488966 SNCAIPQ9Y6H5 919 aa13.61□□□□□ -0.23
YIPF3-207ENST00000488966 MROH5Q6ZUA9 1318 aa13.61□□□□□ -0.23
YIPF3-207ENST00000488966 MYCP01106 439 aaPredicted RBP13.6□□□□□ -0.23
YIPF3-207ENST00000488966 HDLBPQ00341 1268 aaKnown RBP13.6□□□□□ -0.23
YIPF3-207ENST00000488966 ARHGEF6Q15052 776 aa13.6□□□□□ -0.23
YIPF3-207ENST00000488966 LRRC24Q50LG9 513 aa13.6□□□□□ -0.23
YIPF3-207ENST00000488966 VPS37DQ86XT2 251 aa13.6□□□□□ -0.23
YIPF3-207ENST00000488966 ARHGAP39Q9C0H5 1083 aa13.6□□□□□ -0.23
YIPF3-207ENST00000488966 OTOFQ9HC10 1997 aa13.6□□□□□ -0.23
YIPF3-207ENST00000488966 FRAT2O75474 233 aaPredicted RBP13.59□□□□□ -0.23
YIPF3-207ENST00000488966 SLC4A8Q2Y0W8 1093 aa13.59□□□□□ -0.23
YIPF3-207ENST00000488966 RABL6Q3YEC7 729 aaPredicted RBP13.59□□□□□ -0.23
YIPF3-207ENST00000488966 METTL24Q5JXM2 366 aa13.59□□□□□ -0.23
YIPF3-207ENST00000488966 NBPF11Q86T75 865 aa13.59□□□□□ -0.23
YIPF3-207ENST00000488966 ERO1BQ86YB8 467 aa13.59□□□□□ -0.23
YIPF3-207ENST00000488966 TBC1D22AQ8WUA7 517 aa13.59□□□□□ -0.23
YIPF3-207ENST00000488966 ZKSCAN4Q969J2 545 aaPredicted RBP13.59□□□□□ -0.23
YIPF3-207ENST00000488966 TEKT1Q969V4 418 aa13.59□□□□□ -0.23
YIPF3-207ENST00000488966 ZDHHC15Q96MV8 337 aa13.59□□□□□ -0.23
YIPF3-207ENST00000488966 WRNIP1Q96S55 665 aa13.59□□□□□ -0.23
YIPF3-207ENST00000488966 BICC1Q9H694 974 aaKnown RBP13.59□□□□□ -0.23
YIPF3-207ENST00000488966 UTYO14607 1347 aa13.59□□□□□ -0.23
YIPF3-207ENST00000488966 BTBD19C9JJ37 291 aa13.58□□□□□ -0.24
YIPF3-207ENST00000488966 IRF6O14896 467 aa13.58□□□□□ -0.24
YIPF3-207ENST00000488966 TLR2O60603 784 aa13.58□□□□□ -0.24
YIPF3-207ENST00000488966 CETPP11597 493 aa13.58□□□□□ -0.24
YIPF3-207ENST00000488966 BCAMP50895 628 aa13.58□□□□□ -0.24
YIPF3-207ENST00000488966 FXR1P51114 621 aaKnown RBP eCLIP13.58□□□□□ -0.24
YIPF3-207ENST00000488966 LACTBP83111 547 aaPredicted RBP13.58□□□□□ -0.24
YIPF3-207ENST00000488966 CAVIN4Q5BKX8 364 aa13.58□□□□□ -0.24
YIPF3-207ENST00000488966 APOBEC3HQ6NTF7 200 aaKnown RBP13.58□□□□□ -0.24
YIPF3-207ENST00000488966 ANKRD44Q8N8A2 993 aa13.58□□□□□ -0.24
YIPF3-207ENST00000488966 VGLL2Q8N8G2 317 aa13.58□□□□□ -0.24
YIPF3-207ENST00000488966 SH3TC2Q8TF17 1288 aa13.58□□□□□ -0.24
YIPF3-207ENST00000488966 KIAA0100Q14667 2235 aaKnown RBP13.58□□□□□ -0.24
YIPF3-207ENST00000488966 CENPFP49454 3210 aa13.57□□□□□ -0.24
YIPF3-207ENST00000488966 PDE8BO95263 885 aa13.57□□□□□ -0.24
YIPF3-207ENST00000488966 PPIL2Q13356 520 aa13.57□□□□□ -0.24
YIPF3-207ENST00000488966 SNAPC2Q13487 334 aa13.57□□□□□ -0.24
YIPF3-207ENST00000488966 FAM83AQ86UY5 434 aa13.57□□□□□ -0.24
YIPF3-207ENST00000488966 KLHDC4Q8TBB5 520 aa13.57□□□□□ -0.24
YIPF3-207ENST00000488966 MRIQ9BWK5 157 aa13.57□□□□□ -0.24
YIPF3-207ENST00000488966 ZCCHC17Q9NP64 241 aaKnown RBP13.57□□□□□ -0.24
YIPF3-207ENST00000488966 TMOD2Q9NZR1 351 aa13.57□□□□□ -0.24
YIPF3-207ENST00000488966 BRCA2P51587 3418 aa13.57□□□□□ -0.24
YIPF3-207ENST00000488966 RBBP6Q7Z6E9 1792 aaKnown RBP13.56□□□□□ -0.24
YIPF3-207ENST00000488966 WDHD1O75717 1129 aaPredicted RBP13.56□□□□□ -0.24
YIPF3-207ENST00000488966 ECM2O94769 699 aaPredicted RBP13.56□□□□□ -0.24
YIPF3-207ENST00000488966 FKBP1CQ5VVH2 108 aa13.56□□□□□ -0.24
YIPF3-207ENST00000488966 MIGA2Q7L4E1 593 aa13.56□□□□□ -0.24
YIPF3-207ENST00000488966 COLQQ9Y215 455 aaPredicted RBP13.56□□□□□ -0.24
YIPF3-207ENST00000488966 CACNA1FO60840 1977 aa13.56□□□□□ -0.24
YIPF3-207ENST00000488966 CTGFP29279 349 aa13.55□□□□□ -0.24
YIPF3-207ENST00000488966 INPP5BP32019 993 aa13.55□□□□□ -0.24
YIPF3-207ENST00000488966 KIF22Q14807 665 aa13.55□□□□□ -0.24
YIPF3-207ENST00000488966 SUGT1Q9Y2Z0 365 aa13.55□□□□□ -0.24
YIPF3-207ENST00000488966 ARAP2Q8WZ64 1704 aa13.55□□□□□ -0.24
YIPF3-207ENST00000488966 H0YGN5 161 aa13.54□□□□□ -0.24
YIPF3-207ENST00000488966 FGFR2P21802 821 aa13.54□□□□□ -0.24
YIPF3-207ENST00000488966 PPATQ06203 517 aa13.54□□□□□ -0.24
YIPF3-207ENST00000488966 DCAF15Q66K64 600 aa13.54□□□□□ -0.24
YIPF3-207ENST00000488966 HHIPL2Q6UWX4 724 aa13.54□□□□□ -0.24
YIPF3-207ENST00000488966 C17orf99Q6UX52 265 aa13.54□□□□□ -0.24
YIPF3-207ENST00000488966 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms