RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 CCDC158Q5M9N0 1113 aa18.54■□□□□ 0.56
CYTH3-209ENST00000488964 CST9Q5W186 159 aa18.54■□□□□ 0.56
CYTH3-209ENST00000488964 SPTY2D1Q68D10 685 aaPredicted RBP18.54■□□□□ 0.56
CYTH3-209ENST00000488964 SLF2Q8IX21 1173 aa18.54■□□□□ 0.56
CYTH3-209ENST00000488964 HHIPL1Q96JK4 782 aa18.54■□□□□ 0.56
CYTH3-209ENST00000488964 VEZTQ9HBM0 779 aa18.54■□□□□ 0.56
CYTH3-209ENST00000488964 SALL1Q9NSC2 1324 aa18.53■□□□□ 0.56
CYTH3-209ENST00000488964 TNNI2P48788 182 aa18.53■□□□□ 0.56
CYTH3-209ENST00000488964 TNNI3KQ59H18 835 aa18.53■□□□□ 0.56
CYTH3-209ENST00000488964 JMYQ8N9B5 988 aa18.53■□□□□ 0.56
CYTH3-209ENST00000488964 ZBED3Q96IU2 234 aaPredicted RBP18.53■□□□□ 0.56
CYTH3-209ENST00000488964 MRIQ9BWK5 157 aa18.53■□□□□ 0.56
CYTH3-209ENST00000488964 FPGT-TNNI3KV9GXZ4 949 aa18.53■□□□□ 0.56
CYTH3-209ENST00000488964 RRP1P56182 461 aaKnown RBP18.52■□□□□ 0.56
CYTH3-209ENST00000488964 HUNKP57058 714 aa18.52■□□□□ 0.56
CYTH3-209ENST00000488964 FMR1Q06787 632 aaKnown RBP eCLIP18.52■□□□□ 0.56
CYTH3-209ENST00000488964 TTC39AQ5SRH9 613 aa18.52■□□□□ 0.56
CYTH3-209ENST00000488964 SAPCD2Q86UD0 394 aa18.52■□□□□ 0.56
CYTH3-209ENST00000488964 DZIP1Q86YF9 867 aaKnown RBP18.52■□□□□ 0.56
CYTH3-209ENST00000488964 CLRN2A0PK11 232 aa18.51■□□□□ 0.55
CYTH3-209ENST00000488964 RASGRF1Q13972 1273 aa18.51■□□□□ 0.55
CYTH3-209ENST00000488964 TTLL12Q14166 644 aaPredicted RBP18.51■□□□□ 0.55
CYTH3-209ENST00000488964 RAB11FIP3O75154 756 aa18.5■□□□□ 0.55
CYTH3-209ENST00000488964 GRM1Q13255 1194 aa18.5■□□□□ 0.55
CYTH3-209ENST00000488964 SUPT20HL1Q3ZLR7 823 aa18.5■□□□□ 0.55
CYTH3-209ENST00000488964 C20orf194Q5TEA3 1177 aa18.5■□□□□ 0.55
CYTH3-209ENST00000488964 HHIPL2Q6UWX4 724 aa18.5■□□□□ 0.55
CYTH3-209ENST00000488964 KIF1BPQ96EK5 621 aa18.5■□□□□ 0.55
CYTH3-209ENST00000488964 CAPNS2Q96L46 248 aa18.5■□□□□ 0.55
CYTH3-209ENST00000488964 PRMT6Q96LA8 375 aaPredicted RBP18.5■□□□□ 0.55
CYTH3-209ENST00000488964 ZDHHC15Q96MV8 337 aa18.5■□□□□ 0.55
CYTH3-209ENST00000488964 DEFB129Q9H1M3 183 aa18.5■□□□□ 0.55
CYTH3-209ENST00000488964 ABCF2Q9UG63 623 aa18.5■□□□□ 0.55
CYTH3-209ENST00000488964 EXOC6BQ9Y2D4 811 aa18.5■□□□□ 0.55
CYTH3-209ENST00000488964 PAPPA2Q9BXP8 1791 aa18.5■□□□□ 0.55
CYTH3-209ENST00000488964 WDR33Q9C0J8 1336 aaKnown RBP18.49■□□□□ 0.55
CYTH3-209ENST00000488964 ARID4AP29374 1257 aaPredicted RBP18.49■□□□□ 0.55
CYTH3-209ENST00000488964 VEGFBP49765 207 aa18.49■□□□□ 0.55
CYTH3-209ENST00000488964 SPDYE2Q495Y8 402 aa18.49■□□□□ 0.55
CYTH3-209ENST00000488964 ARMC9Q7Z3E5 817 aa18.49■□□□□ 0.55
CYTH3-209ENST00000488964 CLASRPQ8N2M8 674 aaKnown RBP18.49■□□□□ 0.55
CYTH3-209ENST00000488964 SPATA5Q8NB90 893 aa18.49■□□□□ 0.55
CYTH3-209ENST00000488964 AIDAQ96BJ3 306 aa18.49■□□□□ 0.55
CYTH3-209ENST00000488964 GSTO1P78417 241 aa18.48■□□□□ 0.55
CYTH3-209ENST00000488964 ERICH6Q7L0X2 663 aa18.48■□□□□ 0.55
CYTH3-209ENST00000488964 CCDC102AQ96A19 550 aa18.48■□□□□ 0.55
CYTH3-209ENST00000488964 HOOK2Q96ED9 719 aa18.48■□□□□ 0.55
CYTH3-209ENST00000488964 BEGAINQ9BUH8 593 aa18.48■□□□□ 0.55
CYTH3-209ENST00000488964 TDRD3Q9H7E2 651 aaKnown RBP18.48■□□□□ 0.55
CYTH3-209ENST00000488964 ZNF70Q9UC06 446 aaPredicted RBP18.48■□□□□ 0.55
CYTH3-209ENST00000488964 PPP1R12BO60237 982 aaPredicted RBP18.47■□□□□ 0.55
CYTH3-209ENST00000488964 PRDX5P30044 214 aa18.47■□□□□ 0.55
CYTH3-209ENST00000488964 MAP2K1Q02750 393 aaPredicted RBP18.47■□□□□ 0.55
CYTH3-209ENST00000488964 CYP4F22Q6NT55 531 aa18.47■□□□□ 0.55
CYTH3-209ENST00000488964 RGMBQ6NW40 437 aa18.47■□□□□ 0.55
CYTH3-209ENST00000488964 AACSQ86V21 672 aa18.47■□□□□ 0.55
CYTH3-209ENST00000488964 IGSF3O75054 1194 aa18.46■□□□□ 0.55
CYTH3-209ENST00000488964 MAP2K2P36507 400 aa18.46■□□□□ 0.55
CYTH3-209ENST00000488964 NOGQ13253 232 aa18.46■□□□□ 0.55
CYTH3-209ENST00000488964 RHPN1Q8TCX5 695 aa18.46■□□□□ 0.55
CYTH3-209ENST00000488964 DBNDD2Q9BQY9 259 aa18.46■□□□□ 0.55
CYTH3-209ENST00000488964 SCAF8Q9UPN6 1271 aaKnown RBP18.46■□□□□ 0.55
CYTH3-209ENST00000488964 APBB1O00213 710 aa18.45■□□□□ 0.54
CYTH3-209ENST00000488964 LDHCP07864 332 aa18.45■□□□□ 0.54
CYTH3-209ENST00000488964 IFIT2P09913 472 aaKnown RBP18.45■□□□□ 0.54
CYTH3-209ENST00000488964 ZNF157P51786 506 aaPredicted RBP18.45■□□□□ 0.54
CYTH3-209ENST00000488964 RASA3Q14644 834 aa18.45■□□□□ 0.54
CYTH3-209ENST00000488964 GRIK5Q16478 980 aa18.45■□□□□ 0.54
CYTH3-209ENST00000488964 FKBP1CQ5VVH2 108 aa18.45■□□□□ 0.54
CYTH3-209ENST00000488964 ZNF512BQ96KM6 892 aaPredicted RBP18.45■□□□□ 0.54
CYTH3-209ENST00000488964 NOL10Q9BSC4 688 aaKnown RBP18.45■□□□□ 0.54
CYTH3-209ENST00000488964 HMG20BQ9P0W2 317 aa18.45■□□□□ 0.54
CYTH3-209ENST00000488964 LRP2BPQ9P2M1 347 aa18.45■□□□□ 0.54
CYTH3-209ENST00000488964 PCDHAC2Q9Y5I4 1007 aa18.45■□□□□ 0.54
CYTH3-209ENST00000488964 TCP10L2B9ZVM9 353 aa18.44■□□□□ 0.54
CYTH3-209ENST00000488964 AAMPQ13685 434 aa18.44■□□□□ 0.54
CYTH3-209ENST00000488964 PRAMEF18Q5VWM3 479 aa18.44■□□□□ 0.54
CYTH3-209ENST00000488964 DLK2Q6UY11 383 aa18.44■□□□□ 0.54
CYTH3-209ENST00000488964 CCDC8Q9H0W5 538 aaPredicted RBP18.44■□□□□ 0.54
CYTH3-209ENST00000488964 RAI14Q9P0K7 980 aa18.44■□□□□ 0.54
CYTH3-209ENST00000488964 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.44■□□□□ 0.54
CYTH3-209ENST00000488964 MYH2Q9UKX2 1941 aa18.43■□□□□ 0.54
CYTH3-209ENST00000488964 HSPA1AP0DMV8 641 aaKnown RBP18.43■□□□□ 0.54
CYTH3-209ENST00000488964 HSPA1BP0DMV9 641 aaKnown RBP18.43■□□□□ 0.54
CYTH3-209ENST00000488964 MCAMP43121 646 aa18.43■□□□□ 0.54
CYTH3-209ENST00000488964 FAM83AQ86UY5 434 aa18.43■□□□□ 0.54
CYTH3-209ENST00000488964 DBNLQ9UJU6 430 aaKnown RBP18.43■□□□□ 0.54
CYTH3-209ENST00000488964 DAGLAQ9Y4D2 1042 aa18.43■□□□□ 0.54
CYTH3-209ENST00000488964 IREB2P48200 963 aaKnown RBP18.42■□□□□ 0.54
CYTH3-209ENST00000488964 DIXDC1Q155Q3 683 aa18.42■□□□□ 0.54
CYTH3-209ENST00000488964 APOBEC3HQ6NTF7 200 aaKnown RBP18.42■□□□□ 0.54
CYTH3-209ENST00000488964 SIRT2Q8IXJ6 389 aa18.42■□□□□ 0.54
CYTH3-209ENST00000488964 EAF2Q96CJ1 260 aaPredicted RBP18.42■□□□□ 0.54
CYTH3-209ENST00000488964 LRRCC1Q9C099 1032 aa18.42■□□□□ 0.54
CYTH3-209ENST00000488964 IL1RAPL2Q9NP60 686 aa18.42■□□□□ 0.54
CYTH3-209ENST00000488964 ZBTB47Q9UFB7 747 aaPredicted RBP18.42■□□□□ 0.54
CYTH3-209ENST00000488964 ANGEL1Q9UNK9 670 aaKnown RBP18.42■□□□□ 0.54
CYTH3-209ENST00000488964 UNCXA6NJT0 531 aa18.41■□□□□ 0.54
CYTH3-209ENST00000488964 REM2Q8IYK8 340 aaPredicted RBP18.41■□□□□ 0.54
CYTH3-209ENST00000488964 USP40Q9NVE5 1235 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms