RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 UBE2Q2LH0YL09 131 aa17.15■□□□□ 0.34
SPTLC1-207ENST00000488921 CRKP46108 304 aa17.15■□□□□ 0.34
SPTLC1-207ENST00000488921 SUPT20HL1Q3ZLR7 823 aa17.15■□□□□ 0.34
SPTLC1-207ENST00000488921 SPDYE2Q495Y8 402 aa17.15■□□□□ 0.34
SPTLC1-207ENST00000488921 MOB2Q70IA6 237 aa17.15■□□□□ 0.34
SPTLC1-207ENST00000488921 WDR66Q8TBY9 1149 aa17.15■□□□□ 0.34
SPTLC1-207ENST00000488921 TEKT1Q969V4 418 aa17.15■□□□□ 0.34
SPTLC1-207ENST00000488921 CLUAP1Q96AJ1 413 aa17.15■□□□□ 0.34
SPTLC1-207ENST00000488921 ZIC5Q96T25 663 aa17.15■□□□□ 0.34
SPTLC1-207ENST00000488921 PA2G4Q9UQ80 394 aaKnown RBP17.15■□□□□ 0.34
SPTLC1-207ENST00000488921 PPP1R12BO60237 982 aaPredicted RBP17.14■□□□□ 0.33
SPTLC1-207ENST00000488921 TNNI2P48788 182 aa17.14■□□□□ 0.33
SPTLC1-207ENST00000488921 FTSJ3Q8IY81 847 aaKnown RBP17.14■□□□□ 0.33
SPTLC1-207ENST00000488921 DZIP1LQ8IYY4 767 aaKnown RBP17.14■□□□□ 0.33
SPTLC1-207ENST00000488921 TSKSQ9UJT2 592 aa17.14■□□□□ 0.33
SPTLC1-207ENST00000488921 OTOFQ9HC10 1997 aa17.14■□□□□ 0.33
SPTLC1-207ENST00000488921 CASP8AP2Q9UKL3 1982 aa17.14■□□□□ 0.33
SPTLC1-207ENST00000488921 SSC5DA1L4H1 1573 aa17.14■□□□□ 0.33
SPTLC1-207ENST00000488921 TMEM57Q8N5G2 664 aa17.13■□□□□ 0.33
SPTLC1-207ENST00000488921 MRIQ9BWK5 157 aa17.13■□□□□ 0.33
SPTLC1-207ENST00000488921 ZNF70Q9UC06 446 aaPredicted RBP17.13■□□□□ 0.33
SPTLC1-207ENST00000488921 ANGEL1Q9UNK9 670 aaKnown RBP17.13■□□□□ 0.33
SPTLC1-207ENST00000488921 TNNQ9UQP3 1299 aa17.13■□□□□ 0.33
SPTLC1-207ENST00000488921 UNCXA6NJT0 531 aa17.12■□□□□ 0.33
SPTLC1-207ENST00000488921 SEMA3EO15041 775 aa17.12■□□□□ 0.33
SPTLC1-207ENST00000488921 PRKG1Q13976 671 aa17.12■□□□□ 0.33
SPTLC1-207ENST00000488921 RASA3Q14644 834 aa17.12■□□□□ 0.33
SPTLC1-207ENST00000488921 MAP3K11Q16584 847 aa17.12■□□□□ 0.33
SPTLC1-207ENST00000488921 TDRD3Q9H7E2 651 aaKnown RBP17.12■□□□□ 0.33
SPTLC1-207ENST00000488921 TMOD2Q9NZR1 351 aa17.12■□□□□ 0.33
SPTLC1-207ENST00000488921 AKAP2Q9Y2D5 859 aa17.12■□□□□ 0.33
SPTLC1-207ENST00000488921 ZBTB22O15209 634 aa17.11■□□□□ 0.33
SPTLC1-207ENST00000488921 GRIK5Q16478 980 aa17.11■□□□□ 0.33
SPTLC1-207ENST00000488921 LDLRAD1Q5T700 205 aa17.11■□□□□ 0.33
SPTLC1-207ENST00000488921 ZDHHC15Q96MV8 337 aa17.11■□□□□ 0.33
SPTLC1-207ENST00000488921 CSRNP1Q96S65 589 aa17.11■□□□□ 0.33
SPTLC1-207ENST00000488921 DENND2AQ9ULE3 1009 aa17.11■□□□□ 0.33
SPTLC1-207ENST00000488921 AOX1Q06278 1338 aa17.11■□□□□ 0.33
SPTLC1-207ENST00000488921 MYH2Q9UKX2 1941 aa17.1■□□□□ 0.33
SPTLC1-207ENST00000488921 CAPN15O75808 1086 aa17.1■□□□□ 0.33
SPTLC1-207ENST00000488921 IREB2P48200 963 aaKnown RBP17.1■□□□□ 0.33
SPTLC1-207ENST00000488921 SREBF2Q12772 1141 aa17.1■□□□□ 0.33
SPTLC1-207ENST00000488921 HHIPL2Q6UWX4 724 aa17.1■□□□□ 0.33
SPTLC1-207ENST00000488921 ZGPATQ8N5A5 531 aaKnown RBP17.1■□□□□ 0.33
SPTLC1-207ENST00000488921 NBPF12Q5TAG4 269 aaPredicted RBP17.09■□□□□ 0.33
SPTLC1-207ENST00000488921 RNF186Q9NXI6 227 aa17.09■□□□□ 0.33
SPTLC1-207ENST00000488921 SALL1Q9NSC2 1324 aa17.09■□□□□ 0.33
SPTLC1-207ENST00000488921 PDS5AQ29RF7 1337 aaKnown RBP17.08■□□□□ 0.32
SPTLC1-207ENST00000488921 A0A1B0GUL7 405 aa17.08■□□□□ 0.32
SPTLC1-207ENST00000488921 TCP10L2B9ZVM9 353 aa17.08■□□□□ 0.32
SPTLC1-207ENST00000488921 TRPA1O75762 1119 aa17.08■□□□□ 0.32
SPTLC1-207ENST00000488921 PHKA1P46020 1223 aa17.08■□□□□ 0.32
SPTLC1-207ENST00000488921 MVPQ14764 893 aaKnown RBP17.08■□□□□ 0.32
SPTLC1-207ENST00000488921 FKBP1CQ5VVH2 108 aa17.08■□□□□ 0.32
SPTLC1-207ENST00000488921 CCDC102BQ68D86 513 aa17.08■□□□□ 0.32
SPTLC1-207ENST00000488921 ITPRIPQ8IWB1 547 aa17.08■□□□□ 0.32
SPTLC1-207ENST00000488921 SLC10A4Q96EP9 437 aa17.08■□□□□ 0.32
SPTLC1-207ENST00000488921 AK9Q5TCS8 1911 aa17.08■□□□□ 0.32
SPTLC1-207ENST00000488921 RPAP1Q9BWH6 1393 aaPredicted RBP17.07■□□□□ 0.32
SPTLC1-207ENST00000488921 PNMA6EA0A0J9YXQ4 647 aa17.07■□□□□ 0.32
SPTLC1-207ENST00000488921 LDHBP07195 334 aaKnown RBP17.07■□□□□ 0.32
SPTLC1-207ENST00000488921 ZBTB48P10074 688 aaPredicted RBP17.07■□□□□ 0.32
SPTLC1-207ENST00000488921 TFCP2Q12800 502 aa17.07■□□□□ 0.32
SPTLC1-207ENST00000488921 G3BP1Q13283 466 aaKnown RBP eCLIP17.07■□□□□ 0.32
SPTLC1-207ENST00000488921 FAM83AQ86UY5 434 aa17.07■□□□□ 0.32
SPTLC1-207ENST00000488921 ANKRD13AQ8IZ07 590 aa17.07■□□□□ 0.32
SPTLC1-207ENST00000488921 HOOK2Q96ED9 719 aa17.07■□□□□ 0.32
SPTLC1-207ENST00000488921 FZD1Q9UP38 647 aa17.07■□□□□ 0.32
SPTLC1-207ENST00000488921 MS4A1P11836 297 aa17.06■□□□□ 0.32
SPTLC1-207ENST00000488921 ADORA1P30542 326 aa17.06■□□□□ 0.32
SPTLC1-207ENST00000488921 TM4SF4P48230 202 aa17.06■□□□□ 0.32
SPTLC1-207ENST00000488921 SPRYD7Q5W111 196 aa17.06■□□□□ 0.32
SPTLC1-207ENST00000488921 APOBEC3HQ6NTF7 200 aaKnown RBP17.06■□□□□ 0.32
SPTLC1-207ENST00000488921 TMEM39BQ9GZU3 492 aa17.06■□□□□ 0.32
SPTLC1-207ENST00000488921 DOCK2Q92608 1830 aa17.05■□□□□ 0.32
SPTLC1-207ENST00000488921 MANSC4A6NHS7 340 aaPredicted RBP17.05■□□□□ 0.32
SPTLC1-207ENST00000488921 USP2O75604 605 aaPredicted RBP17.05■□□□□ 0.32
SPTLC1-207ENST00000488921 PRDX5P30044 214 aa17.05■□□□□ 0.32
SPTLC1-207ENST00000488921 TIMM10P62072 90 aa17.05■□□□□ 0.32
SPTLC1-207ENST00000488921 MKRN3Q13064 507 aaKnown RBP17.05■□□□□ 0.32
SPTLC1-207ENST00000488921 XAGE2Q96GT9 111 aa17.05■□□□□ 0.32
SPTLC1-207ENST00000488921 TEPSINQ96N21 525 aa17.05■□□□□ 0.32
SPTLC1-207ENST00000488921 INHBEP58166 350 aa17.04■□□□□ 0.32
SPTLC1-207ENST00000488921 RASGRF1Q13972 1273 aa17.04■□□□□ 0.32
SPTLC1-207ENST00000488921 GORABQ5T7V8 394 aa17.04■□□□□ 0.32
SPTLC1-207ENST00000488921 SPTY2D1Q68D10 685 aaPredicted RBP17.04■□□□□ 0.32
SPTLC1-207ENST00000488921 SLF2Q8IX21 1173 aa17.04■□□□□ 0.32
SPTLC1-207ENST00000488921 SSH3Q8TE77 659 aa17.04■□□□□ 0.32
SPTLC1-207ENST00000488921 ABHD8Q96I13 439 aa17.04■□□□□ 0.32
SPTLC1-207ENST00000488921 WNK4Q96J92 1243 aa17.04■□□□□ 0.32
SPTLC1-207ENST00000488921 CLMNQ96JQ2 1002 aa17.04■□□□□ 0.32
SPTLC1-207ENST00000488921 NEUROD6Q96NK8 337 aa17.04■□□□□ 0.32
SPTLC1-207ENST00000488921 DAGLAQ9Y4D2 1042 aa17.04■□□□□ 0.32
SPTLC1-207ENST00000488921 MAST2Q6P0Q8 1798 aa17.04■□□□□ 0.32
SPTLC1-207ENST00000488921 ALDH1A1P00352 501 aa17.03■□□□□ 0.32
SPTLC1-207ENST00000488921 RLBP1P12271 317 aa17.03■□□□□ 0.32
SPTLC1-207ENST00000488921 CACNB3P54284 484 aa17.03■□□□□ 0.32
SPTLC1-207ENST00000488921 ATP8B2P98198 1209 aa17.03■□□□□ 0.32
SPTLC1-207ENST00000488921 OS9Q13438 667 aaPredicted RBP17.03■□□□□ 0.32
SPTLC1-207ENST00000488921 POLA2Q14181 598 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms