RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 TIMM10P62072 90 aa13.79□□□□□ -0.2
ARHGEF39-204ENST00000488918 CCDC158Q5M9N0 1113 aa13.79□□□□□ -0.2
ARHGEF39-204ENST00000488918 DZIP1Q86YF9 867 aaKnown RBP13.79□□□□□ -0.2
ARHGEF39-204ENST00000488918 XAGE2Q96GT9 111 aa13.79□□□□□ -0.2
ARHGEF39-204ENST00000488918 HDLBPQ00341 1268 aaKnown RBP13.78□□□□□ -0.2
ARHGEF39-204ENST00000488918 TTC39AQ5SRH9 613 aa13.78□□□□□ -0.2
ARHGEF39-204ENST00000488918 CCDC102BQ68D86 513 aa13.78□□□□□ -0.2
ARHGEF39-204ENST00000488918 RGMBQ6NW40 437 aa13.78□□□□□ -0.2
ARHGEF39-204ENST00000488918 BCL11AQ9H165 835 aa13.78□□□□□ -0.2
ARHGEF39-204ENST00000488918 DEFB129Q9H1M3 183 aa13.78□□□□□ -0.2
ARHGEF39-204ENST00000488918 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.78□□□□□ -0.2
ARHGEF39-204ENST00000488918 ABCF2Q9UG63 623 aa13.78□□□□□ -0.2
ARHGEF39-204ENST00000488918 SCAF8Q9UPN6 1271 aaKnown RBP13.78□□□□□ -0.2
ARHGEF39-204ENST00000488918 UQCRFS1P1P0C7P4 283 aa13.77□□□□□ -0.21
ARHGEF39-204ENST00000488918 MAP2K2P36507 400 aa13.77□□□□□ -0.21
ARHGEF39-204ENST00000488918 PHKA1P46020 1223 aa13.77□□□□□ -0.21
ARHGEF39-204ENST00000488918 NOGQ13253 232 aa13.77□□□□□ -0.21
ARHGEF39-204ENST00000488918 PRKG1Q13976 671 aa13.77□□□□□ -0.21
ARHGEF39-204ENST00000488918 PDE3AQ14432 1141 aa13.77□□□□□ -0.21
ARHGEF39-204ENST00000488918 PRAMEF18Q5VWM3 479 aa13.77□□□□□ -0.21
ARHGEF39-204ENST00000488918 RPAP2Q8IXW5 612 aaPredicted RBP13.77□□□□□ -0.21
ARHGEF39-204ENST00000488918 SSH3Q8TE77 659 aa13.77□□□□□ -0.21
ARHGEF39-204ENST00000488918 HOOK2Q96ED9 719 aa13.77□□□□□ -0.21
ARHGEF39-204ENST00000488918 PRMT6Q96LA8 375 aaPredicted RBP13.77□□□□□ -0.21
ARHGEF39-204ENST00000488918 POLA2Q14181 598 aa13.76□□□□□ -0.21
ARHGEF39-204ENST00000488918 DLK2Q6UY11 383 aa13.76□□□□□ -0.21
ARHGEF39-204ENST00000488918 NOL10Q9BSC4 688 aaKnown RBP13.76□□□□□ -0.21
ARHGEF39-204ENST00000488918 MRIQ9BWK5 157 aa13.76□□□□□ -0.21
ARHGEF39-204ENST00000488918 TDRD3Q9H7E2 651 aaKnown RBP13.76□□□□□ -0.21
ARHGEF39-204ENST00000488918 ZNF70Q9UC06 446 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF39-204ENST00000488918 PSME4Q14997 1843 aa13.76□□□□□ -0.21
ARHGEF39-204ENST00000488918 COL1A1P02452 1464 aaPredicted RBP13.75□□□□□ -0.21
ARHGEF39-204ENST00000488918 TCP10L2B9ZVM9 353 aa13.75□□□□□ -0.21
ARHGEF39-204ENST00000488918 ADORA1P30542 326 aa13.75□□□□□ -0.21
ARHGEF39-204ENST00000488918 IREB2P48200 963 aaKnown RBP13.75□□□□□ -0.21
ARHGEF39-204ENST00000488918 CTCFP49711 727 aaPredicted RBP13.75□□□□□ -0.21
ARHGEF39-204ENST00000488918 GSTO1P78417 241 aa13.75□□□□□ -0.21
ARHGEF39-204ENST00000488918 CEP85Q6P2H3 762 aa13.75□□□□□ -0.21
ARHGEF39-204ENST00000488918 HHIPL2Q6UWX4 724 aa13.75□□□□□ -0.21
ARHGEF39-204ENST00000488918 ERICH6Q7L0X2 663 aa13.75□□□□□ -0.21
ARHGEF39-204ENST00000488918 GPR108Q9NPR9 543 aa13.75□□□□□ -0.21
ARHGEF39-204ENST00000488918 UBE2Q2LH0YL09 131 aa13.74□□□□□ -0.21
ARHGEF39-204ENST00000488918 APBB1O00213 710 aa13.74□□□□□ -0.21
ARHGEF39-204ENST00000488918 RASA3Q14644 834 aa13.74□□□□□ -0.21
ARHGEF39-204ENST00000488918 SPDYE2Q495Y8 402 aa13.74□□□□□ -0.21
ARHGEF39-204ENST00000488918 SPATA5Q8NB90 893 aa13.74□□□□□ -0.21
ARHGEF39-204ENST00000488918 ZBED3Q96IU2 234 aaPredicted RBP13.74□□□□□ -0.21
ARHGEF39-204ENST00000488918 ZDHHC15Q96MV8 337 aa13.74□□□□□ -0.21
ARHGEF39-204ENST00000488918 RAI14Q9P0K7 980 aa13.74□□□□□ -0.21
ARHGEF39-204ENST00000488918 LRP2BPQ9P2M1 347 aa13.74□□□□□ -0.21
ARHGEF39-204ENST00000488918 ANGEL1Q9UNK9 670 aaKnown RBP13.74□□□□□ -0.21
ARHGEF39-204ENST00000488918 TRPM7Q96QT4 1865 aa13.74□□□□□ -0.21
ARHGEF39-204ENST00000488918 CA12O43570 354 aa13.73□□□□□ -0.21
ARHGEF39-204ENST00000488918 AOC2O75106 756 aa13.73□□□□□ -0.21
ARHGEF39-204ENST00000488918 LDHCP07864 332 aa13.73□□□□□ -0.21
ARHGEF39-204ENST00000488918 TNNI3KQ59H18 835 aa13.73□□□□□ -0.21
ARHGEF39-204ENST00000488918 REM2Q8IYK8 340 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF39-204ENST00000488918 CLASRPQ8N2M8 674 aaKnown RBP13.73□□□□□ -0.21
ARHGEF39-204ENST00000488918 SLC10A4Q96EP9 437 aa13.73□□□□□ -0.21
ARHGEF39-204ENST00000488918 ZBTB47Q9UFB7 747 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF39-204ENST00000488918 FPGT-TNNI3KV9GXZ4 949 aa13.73□□□□□ -0.21
ARHGEF39-204ENST00000488918 A0A1B0GUL6 1792 aa13.73□□□□□ -0.21
ARHGEF39-204ENST00000488918 PDS5AQ29RF7 1337 aaKnown RBP13.72□□□□□ -0.21
ARHGEF39-204ENST00000488918 SALL1Q9NSC2 1324 aa13.72□□□□□ -0.21
ARHGEF39-204ENST00000488918 IFIT2P09913 472 aaKnown RBP13.72□□□□□ -0.21
ARHGEF39-204ENST00000488918 PRDX5P30044 214 aa13.72□□□□□ -0.21
ARHGEF39-204ENST00000488918 RASGRF1Q13972 1273 aa13.72□□□□□ -0.21
ARHGEF39-204ENST00000488918 AACSQ86V21 672 aa13.72□□□□□ -0.21
ARHGEF39-204ENST00000488918 EXOC6BQ9Y2D4 811 aa13.72□□□□□ -0.21
ARHGEF39-204ENST00000488918 NOP58Q9Y2X3 529 aaKnown RBP13.72□□□□□ -0.21
ARHGEF39-204ENST00000488918 PCDHAC2Q9Y5I4 1007 aa13.72□□□□□ -0.21
ARHGEF39-204ENST00000488918 RAB11FIP3O75154 756 aa13.71□□□□□ -0.21
ARHGEF39-204ENST00000488918 KIF1BPQ96EK5 621 aa13.71□□□□□ -0.21
ARHGEF39-204ENST00000488918 ZBTB40Q9NUA8 1239 aa13.71□□□□□ -0.21
ARHGEF39-204ENST00000488918 USP40Q9NVE5 1235 aa13.71□□□□□ -0.21
ARHGEF39-204ENST00000488918 WBP1LQ9NX94 342 aa13.71□□□□□ -0.21
ARHGEF39-204ENST00000488918 ARID4AP29374 1257 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF39-204ENST00000488918 DIXDC1Q155Q3 683 aa13.7□□□□□ -0.22
ARHGEF39-204ENST00000488918 GRIK5Q16478 980 aa13.7□□□□□ -0.22
ARHGEF39-204ENST00000488918 DCAF15Q66K64 600 aa13.7□□□□□ -0.22
ARHGEF39-204ENST00000488918 MOB2Q70IA6 237 aa13.7□□□□□ -0.22
ARHGEF39-204ENST00000488918 ZSCAN29Q8IWY8 852 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF39-204ENST00000488918 CCDC8Q9H0W5 538 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF39-204ENST00000488918 DAGLAQ9Y4D2 1042 aa13.7□□□□□ -0.22
ARHGEF39-204ENST00000488918 CSADQ9Y600 493 aa13.7□□□□□ -0.22
ARHGEF39-204ENST00000488918 UNCXA6NJT0 531 aa13.69□□□□□ -0.22
ARHGEF39-204ENST00000488918 SLC10A3P09131 477 aa13.69□□□□□ -0.22
ARHGEF39-204ENST00000488918 CACNB3P54284 484 aa13.69□□□□□ -0.22
ARHGEF39-204ENST00000488918 KIF23Q02241 960 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF39-204ENST00000488918 SREBF2Q12772 1141 aa13.69□□□□□ -0.22
ARHGEF39-204ENST00000488918 NBPF12Q5TAG4 269 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF39-204ENST00000488918 FKBP1CQ5VVH2 108 aa13.69□□□□□ -0.22
ARHGEF39-204ENST00000488918 RHPN1Q8TCX5 695 aa13.69□□□□□ -0.22
ARHGEF39-204ENST00000488918 DBNDD2Q9BQY9 259 aa13.69□□□□□ -0.22
ARHGEF39-204ENST00000488918 TMEM39BQ9GZU3 492 aa13.69□□□□□ -0.22
ARHGEF39-204ENST00000488918 HMG20BQ9P0W2 317 aa13.69□□□□□ -0.22
ARHGEF39-204ENST00000488918 FOXN1O15353 648 aa13.68□□□□□ -0.22
ARHGEF39-204ENST00000488918 BAG3O95817 575 aa13.68□□□□□ -0.22
ARHGEF39-204ENST00000488918 TCP10Q12799 353 aa13.68□□□□□ -0.22
ARHGEF39-204ENST00000488918 MKRN3Q13064 507 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms