RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 GSTM4Q03013 218 aa6.08□□□□□ -1.44
CD46-215ENST00000488596 NFXL1Q6ZNB6 911 aa6.08□□□□□ -1.44
CD46-215ENST00000488596 C2CD4AQ8NCU7 369 aaPredicted RBP6.08□□□□□ -1.44
CD46-215ENST00000488596 GIMAP7Q8NHV1 300 aa6.08□□□□□ -1.44
CD46-215ENST00000488596 OSBPL1AQ9BXW6 950 aa6.08□□□□□ -1.44
CD46-215ENST00000488596 KRTAP4-11Q9BYQ6 195 aa6.08□□□□□ -1.44
CD46-215ENST00000488596 NRSN2Q9GZP1 204 aa6.08□□□□□ -1.44
CD46-215ENST00000488596 ZFYVE28Q9HCC9 887 aa6.08□□□□□ -1.44
CD46-215ENST00000488596 CCDC87Q9NVE4 849 aa6.08□□□□□ -1.44
CD46-215ENST00000488596 C8AP07357 584 aa6.07□□□□□ -1.44
CD46-215ENST00000488596 USP11P51784 963 aa6.07□□□□□ -1.44
CD46-215ENST00000488596 SOX4Q06945 474 aaPredicted RBP6.07□□□□□ -1.44
CD46-215ENST00000488596 EHHADHQ08426 723 aa6.07□□□□□ -1.44
CD46-215ENST00000488596 PHLDB3Q6NSJ2 640 aa6.07□□□□□ -1.44
CD46-215ENST00000488596 PAOXQ6QHF9 649 aa6.07□□□□□ -1.44
CD46-215ENST00000488596 CCDC39Q9UFE4 941 aa6.07□□□□□ -1.44
CD46-215ENST00000488596 AMOTL2Q9Y2J4 779 aa6.07□□□□□ -1.44
CD46-215ENST00000488596 FAM13AO94988 1023 aa6.06□□□□□ -1.44
CD46-215ENST00000488596 CTSBP07858 339 aa6.06□□□□□ -1.44
CD46-215ENST00000488596 USP5P45974 858 aa6.06□□□□□ -1.44
CD46-215ENST00000488596 ZNF423Q2M1K9 1284 aa6.06□□□□□ -1.44
CD46-215ENST00000488596 GJD3Q8N144 294 aa6.06□□□□□ -1.44
CD46-215ENST00000488596 EZH1Q92800 747 aaPredicted RBP6.06□□□□□ -1.44
CD46-215ENST00000488596 TBC1D32Q96NH3 1257 aa6.06□□□□□ -1.44
CD46-215ENST00000488596 ANO2Q9NQ90 1003 aa6.06□□□□□ -1.44
CD46-215ENST00000488596 PRKAG2Q9UGJ0 569 aa6.06□□□□□ -1.44
CD46-215ENST00000488596 FAM170BA6NMN3 283 aa6.05□□□□□ -1.44
CD46-215ENST00000488596 PRNPP04156 253 aa6.05□□□□□ -1.44
CD46-215ENST00000488596 PDIA4P13667 645 aaKnown RBP6.05□□□□□ -1.44
CD46-215ENST00000488596 ZAR1Q86SH2 424 aa6.05□□□□□ -1.44
CD46-215ENST00000488596 GATA6Q92908 595 aa6.05□□□□□ -1.44
CD46-215ENST00000488596 ASIC4Q96FT7 647 aa6.05□□□□□ -1.44
CD46-215ENST00000488596 ANGEL1Q9UNK9 670 aaKnown RBP6.05□□□□□ -1.44
CD46-215ENST00000488596 A0A096LPE4 126 aa6.04□□□□□ -1.44
CD46-215ENST00000488596 A0A1W2PPZ6 126 aa6.04□□□□□ -1.44
CD46-215ENST00000488596 CYP26A1O43174 497 aa6.04□□□□□ -1.44
CD46-215ENST00000488596 ADH5P11766 374 aa6.04□□□□□ -1.44
CD46-215ENST00000488596 MAOBP27338 520 aa6.04□□□□□ -1.44
CD46-215ENST00000488596 GRIA4P48058 902 aa6.04□□□□□ -1.44
CD46-215ENST00000488596 FKBP4Q02790 459 aaKnown RBP eCLIP6.04□□□□□ -1.44
CD46-215ENST00000488596 COL19A1Q14993 1142 aa6.04□□□□□ -1.44
CD46-215ENST00000488596 CPSF6Q16630 551 aaKnown RBP eCLIP6.04□□□□□ -1.44
CD46-215ENST00000488596 SPRED3Q2MJR0 410 aa6.04□□□□□ -1.44
CD46-215ENST00000488596 CBLL1Q75N03 491 aa6.04□□□□□ -1.44
CD46-215ENST00000488596 CCNJLQ8IV13 435 aa6.04□□□□□ -1.44
CD46-215ENST00000488596 TCF12Q99081 682 aa6.04□□□□□ -1.44
CD46-215ENST00000488596 METTL22Q9BUU2 404 aaPredicted RBP6.04□□□□□ -1.44
CD46-215ENST00000488596 ACTL7BQ9Y614 415 aa6.04□□□□□ -1.44
CD46-215ENST00000488596 A0A1W2PP55 124 aa6.03□□□□□ -1.44
CD46-215ENST00000488596 ECEL1O95672 775 aa6.03□□□□□ -1.44
CD46-215ENST00000488596 ABL1P00519 1130 aa6.03□□□□□ -1.44
CD46-215ENST00000488596 NFICP08651 508 aa6.03□□□□□ -1.44
CD46-215ENST00000488596 PCDH1Q08174 1060 aa6.03□□□□□ -1.44
CD46-215ENST00000488596 ZNF211Q13398 564 aaPredicted RBP6.03□□□□□ -1.44
CD46-215ENST00000488596 SF3B2Q13435 895 aaKnown RBP6.03□□□□□ -1.44
CD46-215ENST00000488596 CLEC4MQ9H2X3 399 aaPredicted RBP6.03□□□□□ -1.44
CD46-215ENST00000488596 LCE4AQ5TA78 99 aa6.02□□□□□ -1.45
CD46-215ENST00000488596 TP53INP2Q8IXH6 220 aa6.02□□□□□ -1.45
CD46-215ENST00000488596 GALNT12Q8IXK2 581 aa6.02□□□□□ -1.45
CD46-215ENST00000488596 LIN7BQ9HAP6 207 aa6.02□□□□□ -1.45
CD46-215ENST00000488596 FAM105AQ9NUU6 356 aa6.02□□□□□ -1.45
CD46-215ENST00000488596 RAB6AP20340 208 aa6.01□□□□□ -1.45
CD46-215ENST00000488596 POU4F3Q15319 338 aa6.01□□□□□ -1.45
CD46-215ENST00000488596 USPL1Q5W0Q7 1092 aa6.01□□□□□ -1.45
CD46-215ENST00000488596 DYMQ7RTS9 669 aa6.01□□□□□ -1.45
CD46-215ENST00000488596 VSIG10LQ86VR7 867 aa6.01□□□□□ -1.45
CD46-215ENST00000488596 FBXL18Q96ME1 805 aa6.01□□□□□ -1.45
CD46-215ENST00000488596 TRIM56Q9BRZ2 755 aaKnown RBP6.01□□□□□ -1.45
CD46-215ENST00000488596 TRAIPQ9BWF2 469 aa6.01□□□□□ -1.45
CD46-215ENST00000488596 YIPF2Q9BWQ6 316 aa6.01□□□□□ -1.45
CD46-215ENST00000488596 KRTAP4-5Q9BYR2 181 aa6.01□□□□□ -1.45
CD46-215ENST00000488596 SEMA6CQ9H3T2 930 aa6.01□□□□□ -1.45
CD46-215ENST00000488596 BSDC1Q9NW68 430 aaPredicted RBP6.01□□□□□ -1.45
CD46-215ENST00000488596 ZC3H7BQ9UGR2 993 aaKnown RBP6.01□□□□□ -1.45
CD46-215ENST00000488596 CYP11A1P05108 521 aa6□□□□□ -1.45
CD46-215ENST00000488596 JUNBP17275 347 aaPredicted RBP6□□□□□ -1.45
CD46-215ENST00000488596 AKAP4Q5JQC9 854 aa6□□□□□ -1.45
CD46-215ENST00000488596 ZNF765Q7L2R6 523 aa6□□□□□ -1.45
CD46-215ENST00000488596 ACSS3Q9H6R3 686 aa6□□□□□ -1.45
CD46-215ENST00000488596 DYNC1LI2O43237 492 aaPredicted RBP5.99□□□□□ -1.45
CD46-215ENST00000488596 EIF4EBP3O60516 100 aaPredicted RBP5.99□□□□□ -1.45
CD46-215ENST00000488596 MAP7Q14244 749 aa5.99□□□□□ -1.45
CD46-215ENST00000488596 ECM1Q16610 540 aa5.99□□□□□ -1.45
CD46-215ENST00000488596 DUSP27Q5VZP5 1158 aa5.99□□□□□ -1.45
CD46-215ENST00000488596 SEZ6L2Q6UXD5 910 aa5.99□□□□□ -1.45
CD46-215ENST00000488596 AEBP1Q8IUX7 1158 aa5.99□□□□□ -1.45
CD46-215ENST00000488596 GSX1Q9H4S2 264 aaPredicted RBP5.99□□□□□ -1.45
CD46-215ENST00000488596 LRRC4CQ9HCJ2 640 aa5.99□□□□□ -1.45
CD46-215ENST00000488596 PAK6Q9NQU5 681 aaPredicted RBP5.99□□□□□ -1.45
CD46-215ENST00000488596 C1GALT1Q9NS00 363 aa5.99□□□□□ -1.45
CD46-215ENST00000488596 RAD18Q9NS91 495 aa5.99□□□□□ -1.45
CD46-215ENST00000488596 MTMR7Q9Y216 660 aa5.99□□□□□ -1.45
CD46-215ENST00000488596 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.98□□□□□ -1.45
CD46-215ENST00000488596 B3GALT4O96024 378 aa5.98□□□□□ -1.45
CD46-215ENST00000488596 ITGB5P18084 799 aa5.98□□□□□ -1.45
CD46-215ENST00000488596 ASPAP45381 313 aa5.98□□□□□ -1.45
CD46-215ENST00000488596 TRIM26Q12899 539 aaPredicted RBP5.98□□□□□ -1.45
CD46-215ENST00000488596 FBLN7Q53RD9 439 aa5.98□□□□□ -1.45
CD46-215ENST00000488596 KIAA0319Q5VV43 1072 aa5.98□□□□□ -1.45
CD46-215ENST00000488596 FLCNQ8NFG4 579 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms