RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 EPHA10Q5JZY3 1008 aa14.46□□□□□ -0.09
SNU13-208ENST00000488571 BEND3Q5T5X7 828 aa14.46□□□□□ -0.09
SNU13-208ENST00000488571 ZNF804AQ7Z570 1209 aa14.46□□□□□ -0.09
SNU13-208ENST00000488571 WNK4Q96J92 1243 aa14.46□□□□□ -0.09
SNU13-208ENST00000488571 JAG2Q9Y219 1238 aa14.46□□□□□ -0.09
SNU13-208ENST00000488571 PPP1R12BO60237 982 aaPredicted RBP14.45□□□□□ -0.1
SNU13-208ENST00000488571 GJA5P36382 358 aa14.45□□□□□ -0.1
SNU13-208ENST00000488571 INHBEP58166 350 aa14.45□□□□□ -0.1
SNU13-208ENST00000488571 FKBP1AP62942 108 aaKnown RBP14.45□□□□□ -0.1
SNU13-208ENST00000488571 NBPF12Q5TAG4 269 aaPredicted RBP14.45□□□□□ -0.1
SNU13-208ENST00000488571 ARAP2Q8WZ64 1704 aa14.45□□□□□ -0.1
SNU13-208ENST00000488571 ZNF594Q96JF6 807 aaPredicted RBP14.45□□□□□ -0.1
SNU13-208ENST00000488571 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.45□□□□□ -0.1
SNU13-208ENST00000488571 UNCXA6NJT0 531 aa14.44□□□□□ -0.1
SNU13-208ENST00000488571 USP2O75604 605 aaPredicted RBP14.44□□□□□ -0.1
SNU13-208ENST00000488571 EXOSC9Q06265 439 aaKnown RBP14.44□□□□□ -0.1
SNU13-208ENST00000488571 LMBR1LQ6UX01 489 aa14.44□□□□□ -0.1
SNU13-208ENST00000488571 CHMP3Q9Y3E7 222 aa14.44□□□□□ -0.1
SNU13-208ENST00000488571 CENPFP49454 3210 aa14.43□□□□□ -0.1
SNU13-208ENST00000488571 MYO1BO43795 1136 aa14.43□□□□□ -0.1
SNU13-208ENST00000488571 SUPT20HL1Q3ZLR7 823 aa14.43□□□□□ -0.1
SNU13-208ENST00000488571 OTOP1Q7RTM1 612 aa14.43□□□□□ -0.1
SNU13-208ENST00000488571 VEZTQ9HBM0 779 aa14.43□□□□□ -0.1
SNU13-208ENST00000488571 TRIM17Q9Y577 477 aa14.43□□□□□ -0.1
SNU13-208ENST00000488571 MKI67P46013 3256 aaKnown RBP14.43□□□□□ -0.1
SNU13-208ENST00000488571 FAM205AQ6ZU69 1335 aa14.42□□□□□ -0.1
SNU13-208ENST00000488571 RBBP6Q7Z6E9 1792 aaKnown RBP14.42□□□□□ -0.1
SNU13-208ENST00000488571 PLIN1O60240 522 aa14.42□□□□□ -0.1
SNU13-208ENST00000488571 CRHR2Q13324 411 aa14.42□□□□□ -0.1
SNU13-208ENST00000488571 RASA3Q14644 834 aa14.42□□□□□ -0.1
SNU13-208ENST00000488571 LDHAL6AQ6ZMR3 332 aa14.42□□□□□ -0.1
SNU13-208ENST00000488571 WDR63Q8IWG1 891 aa14.42□□□□□ -0.1
SNU13-208ENST00000488571 OTUD5Q96G74 571 aa14.42□□□□□ -0.1
SNU13-208ENST00000488571 PTPN18Q99952 460 aa14.42□□□□□ -0.1
SNU13-208ENST00000488571 BRCA2P51587 3418 aa14.41□□□□□ -0.1
SNU13-208ENST00000488571 GRM8O00222 908 aa14.41□□□□□ -0.1
SNU13-208ENST00000488571 IREB2P48200 963 aaKnown RBP14.41□□□□□ -0.1
SNU13-208ENST00000488571 RBM5P52756 815 aaKnown RBP eCLIP14.41□□□□□ -0.1
SNU13-208ENST00000488571 CAP1Q01518 475 aa14.41□□□□□ -0.1
SNU13-208ENST00000488571 CCDC57Q2TAC2 916 aa14.41□□□□□ -0.1
SNU13-208ENST00000488571 TDRD7Q8NHU6 1098 aaKnown RBP14.41□□□□□ -0.1
SNU13-208ENST00000488571 TESPA1A2RU30 521 aaPredicted RBP14.4□□□□□ -0.1
SNU13-208ENST00000488571 POTEFA5A3E0 1075 aa14.4□□□□□ -0.1
SNU13-208ENST00000488571 GYG1P46976 350 aa14.4□□□□□ -0.1
SNU13-208ENST00000488571 MFSD14BQ5SR56 506 aa14.4□□□□□ -0.1
SNU13-208ENST00000488571 CDAN1Q8IWY9 1227 aa14.4□□□□□ -0.1
SNU13-208ENST00000488571 ANKRD13AQ8IZ07 590 aa14.4□□□□□ -0.1
SNU13-208ENST00000488571 CD99L2Q8TCZ2 262 aa14.4□□□□□ -0.1
SNU13-208ENST00000488571 TEPSINQ96N21 525 aa14.4□□□□□ -0.1
SNU13-208ENST00000488571 CNNM1Q9NRU3 951 aa14.4□□□□□ -0.1
SNU13-208ENST00000488571 ZNF70Q9UC06 446 aaPredicted RBP14.4□□□□□ -0.1
SNU13-208ENST00000488571 SERPINA10Q9UK55 444 aa14.4□□□□□ -0.1
SNU13-208ENST00000488571 SALL2Q9Y467 1007 aaPredicted RBP14.4□□□□□ -0.1
SNU13-208ENST00000488571 TTLL13PA6NNM8 815 aa14.39□□□□□ -0.11
SNU13-208ENST00000488571 UBE4AQ14139 1066 aa14.39□□□□□ -0.11
SNU13-208ENST00000488571 KAZALD1Q96I82 304 aa14.39□□□□□ -0.11
SNU13-208ENST00000488571 MS4A4AQ96JQ5 239 aa14.39□□□□□ -0.11
SNU13-208ENST00000488571 FAM84BQ96KN1 310 aaPredicted RBP14.39□□□□□ -0.11
SNU13-208ENST00000488571 PUS3Q9BZE2 481 aaKnown RBP14.39□□□□□ -0.11
SNU13-208ENST00000488571 TDRD3Q9H7E2 651 aaKnown RBP14.39□□□□□ -0.11
SNU13-208ENST00000488571 TTF2Q9UNY4 1162 aaKnown RBP14.39□□□□□ -0.11
SNU13-208ENST00000488571 PTPN22Q9Y2R2 807 aa14.39□□□□□ -0.11
SNU13-208ENST00000488571 TNFAIP1Q13829 316 aa14.38□□□□□ -0.11
SNU13-208ENST00000488571 GRIK5Q16478 980 aa14.38□□□□□ -0.11
SNU13-208ENST00000488571 TAF7LQ5H9L4 462 aa14.38□□□□□ -0.11
SNU13-208ENST00000488571 INTS3Q68E01 1043 aaKnown RBP14.38□□□□□ -0.11
SNU13-208ENST00000488571 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.38□□□□□ -0.11
SNU13-208ENST00000488571 DZIP1LQ8IYY4 767 aaKnown RBP14.38□□□□□ -0.11
SNU13-208ENST00000488571 OPTNQ96CV9 577 aa14.38□□□□□ -0.11
SNU13-208ENST00000488571 ERO1AQ96HE7 468 aa14.38□□□□□ -0.11
SNU13-208ENST00000488571 SUCLG2Q96I99 432 aa14.38□□□□□ -0.11
SNU13-208ENST00000488571 ELP3Q9H9T3 547 aa14.38□□□□□ -0.11
SNU13-208ENST00000488571 MRS2Q9HD23 443 aa14.38□□□□□ -0.11
SNU13-208ENST00000488571 C9orf78Q9NZ63 289 aaPredicted RBP14.38□□□□□ -0.11
SNU13-208ENST00000488571 ALDH1L1O75891 902 aa14.37□□□□□ -0.11
SNU13-208ENST00000488571 HIBADHP31937 336 aaKnown RBP14.37□□□□□ -0.11
SNU13-208ENST00000488571 OTUD7BQ6GQQ9 843 aa14.37□□□□□ -0.11
SNU13-208ENST00000488571 IFNLR1Q8IU57 520 aaPredicted RBP14.37□□□□□ -0.11
SNU13-208ENST00000488571 ARMC5Q96C12 935 aa14.37□□□□□ -0.11
SNU13-208ENST00000488571 TMEM39BQ9GZU3 492 aa14.37□□□□□ -0.11
SNU13-208ENST00000488571 RIPOR2Q9Y4F9 1068 aa14.37□□□□□ -0.11
SNU13-208ENST00000488571 TCP10L2B9ZVM9 353 aa14.36□□□□□ -0.11
SNU13-208ENST00000488571 CRKP46108 304 aa14.36□□□□□ -0.11
SNU13-208ENST00000488571 SP3Q02447 781 aa14.36□□□□□ -0.11
SNU13-208ENST00000488571 BRI3BPQ8WY22 251 aa14.36□□□□□ -0.11
SNU13-208ENST00000488571 SRCIN1Q9C0H9 1055 aa14.36□□□□□ -0.11
SNU13-208ENST00000488571 EFCC1Q9HA90 598 aa14.36□□□□□ -0.11
SNU13-208ENST00000488571 NBPF7P0C2Y1 421 aaPredicted RBP14.35□□□□□ -0.11
SNU13-208ENST00000488571 VGLL4Q14135 290 aa14.35□□□□□ -0.11
SNU13-208ENST00000488571 SLC4A10Q6U841 1118 aa14.35□□□□□ -0.11
SNU13-208ENST00000488571 FBXO33Q7Z6M2 555 aa14.35□□□□□ -0.11
SNU13-208ENST00000488571 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.35□□□□□ -0.111e-9■■□□□ 13.5
SNU13-208ENST00000488571 KIAA0100Q14667 2235 aaKnown RBP14.35□□□□□ -0.11
SNU13-208ENST00000488571 UTYO14607 1347 aa14.35□□□□□ -0.11
SNU13-208ENST00000488571 PYGBP11216 843 aa14.34□□□□□ -0.11
SNU13-208ENST00000488571 MAP3K9P80192 1104 aa14.34□□□□□ -0.11
SNU13-208ENST00000488571 IQSEC3Q9UPP2 1182 aaPredicted RBP14.34□□□□□ -0.11
SNU13-208ENST00000488571 MROH5Q6ZUA9 1318 aa14.34□□□□□ -0.11
SNU13-208ENST00000488571 ZSWIM8A7E2V4 1837 aa14.34□□□□□ -0.11
SNU13-208ENST00000488571 CCL15-CCL14A0A0B4J2E2 113 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms