RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 TNS4Q8IZW8 715 aa22.02■■□□□ 1.12
ITGB1-215ENST00000488494 C1orf115Q9H7X2 142 aa22.02■■□□□ 1.12
ITGB1-215ENST00000488494 PPP2R3BQ9Y5P8 575 aa22.02■■□□□ 1.12
ITGB1-215ENST00000488494 PHKA1P46020 1223 aa22.01■■□□□ 1.11
ITGB1-215ENST00000488494 PRKG1Q13976 671 aa22.01■■□□□ 1.11
ITGB1-215ENST00000488494 SPDYE2Q495Y8 402 aa22.01■■□□□ 1.11
ITGB1-215ENST00000488494 PRDM10Q9NQV6 1147 aa22.01■■□□□ 1.11
ITGB1-215ENST00000488494 TSKSQ9UJT2 592 aa22.01■■□□□ 1.11
ITGB1-215ENST00000488494 TFCP2Q12800 502 aa22■■□□□ 1.11
ITGB1-215ENST00000488494 TDRD3Q9H7E2 651 aaKnown RBP22■■□□□ 1.11
ITGB1-215ENST00000488494 GNL3LQ9NVN8 582 aaKnown RBP22■■□□□ 1.11
ITGB1-215ENST00000488494 ZNF70Q9UC06 446 aaPredicted RBP22■■□□□ 1.11
ITGB1-215ENST00000488494 MAST3O60307 1309 aa22■■□□□ 1.11
ITGB1-215ENST00000488494 WDR66Q8TBY9 1149 aa21.99■■□□□ 1.11
ITGB1-215ENST00000488494 TEKT1Q969V4 418 aa21.99■■□□□ 1.11
ITGB1-215ENST00000488494 HDLBPQ00341 1268 aaKnown RBP21.98■■□□□ 1.11
ITGB1-215ENST00000488494 KIF23Q02241 960 aaPredicted RBP21.98■■□□□ 1.11
ITGB1-215ENST00000488494 TNFAIP1Q13829 316 aa21.98■■□□□ 1.11
ITGB1-215ENST00000488494 ARMC9Q7Z3E5 817 aa21.98■■□□□ 1.11
ITGB1-215ENST00000488494 PANK1Q8TE04 598 aa21.98■■□□□ 1.11
ITGB1-215ENST00000488494 FZD1Q9UP38 647 aa21.98■■□□□ 1.11
ITGB1-215ENST00000488494 SUGT1Q9Y2Z0 365 aa21.98■■□□□ 1.11
ITGB1-215ENST00000488494 A0A1B0GUL7 405 aa21.97■■□□□ 1.11
ITGB1-215ENST00000488494 CA12O43570 354 aa21.97■■□□□ 1.11
ITGB1-215ENST00000488494 RASA3Q14644 834 aa21.97■■□□□ 1.11
ITGB1-215ENST00000488494 CCDC102BQ68D86 513 aa21.97■■□□□ 1.11
ITGB1-215ENST00000488494 ANGEL1Q9UNK9 670 aaKnown RBP21.97■■□□□ 1.11
ITGB1-215ENST00000488494 AKAP2Q9Y2D5 859 aa21.97■■□□□ 1.11
ITGB1-215ENST00000488494 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.97■■□□□ 1.11
ITGB1-215ENST00000488494 TCP10L2B9ZVM9 353 aa21.96■■□□□ 1.11
ITGB1-215ENST00000488494 SEMA3EO15041 775 aa21.96■■□□□ 1.11
ITGB1-215ENST00000488494 TIMM10P62072 90 aa21.96■■□□□ 1.11
ITGB1-215ENST00000488494 POLA2Q14181 598 aa21.96■■□□□ 1.11
ITGB1-215ENST00000488494 ZDHHC15Q96MV8 337 aa21.96■■□□□ 1.11
ITGB1-215ENST00000488494 PRDX5P30044 214 aa21.95■■□□□ 1.1
ITGB1-215ENST00000488494 G3BP1Q13283 466 aaKnown RBP eCLIP21.95■■□□□ 1.1
ITGB1-215ENST00000488494 RASGRF1Q13972 1273 aa21.95■■□□□ 1.1
ITGB1-215ENST00000488494 NBPF12Q5TAG4 269 aaPredicted RBP21.95■■□□□ 1.1
ITGB1-215ENST00000488494 XAGE2Q96GT9 111 aa21.95■■□□□ 1.1
ITGB1-215ENST00000488494 DENND2AQ9ULE3 1009 aa21.95■■□□□ 1.1
ITGB1-215ENST00000488494 ZBTB7BO15156 539 aaPredicted RBP21.94■■□□□ 1.1
ITGB1-215ENST00000488494 CACNB3P54284 484 aa21.94■■□□□ 1.1
ITGB1-215ENST00000488494 MVPQ14764 893 aaKnown RBP21.94■■□□□ 1.1
ITGB1-215ENST00000488494 SUPT20HL1Q3ZLR7 823 aa21.94■■□□□ 1.1
ITGB1-215ENST00000488494 SALL1Q9NSC2 1324 aa21.94■■□□□ 1.1
ITGB1-215ENST00000488494 OTOFQ9HC10 1997 aa21.94■■□□□ 1.1
ITGB1-215ENST00000488494 LDHBP07195 334 aaKnown RBP21.93■■□□□ 1.1
ITGB1-215ENST00000488494 MKRN3Q13064 507 aaKnown RBP21.93■■□□□ 1.1
ITGB1-215ENST00000488494 DIXDC1Q155Q3 683 aa21.93■■□□□ 1.1
ITGB1-215ENST00000488494 CDAN1Q8IWY9 1227 aa21.93■■□□□ 1.1
ITGB1-215ENST00000488494 SSH3Q8TE77 659 aa21.93■■□□□ 1.1
ITGB1-215ENST00000488494 NEUROD6Q96NK8 337 aa21.93■■□□□ 1.1
ITGB1-215ENST00000488494 TMEM39BQ9GZU3 492 aa21.93■■□□□ 1.1
ITGB1-215ENST00000488494 PPP1R12BO60237 982 aaPredicted RBP21.92■■□□□ 1.1
ITGB1-215ENST00000488494 ATP8B2P98198 1209 aa21.92■■□□□ 1.1
ITGB1-215ENST00000488494 OS9Q13438 667 aaPredicted RBP21.92■■□□□ 1.1
ITGB1-215ENST00000488494 LDLRAD1Q5T700 205 aa21.92■■□□□ 1.1
ITGB1-215ENST00000488494 APOBEC3HQ6NTF7 200 aaKnown RBP21.92■■□□□ 1.1
ITGB1-215ENST00000488494 HHIPL2Q6UWX4 724 aa21.92■■□□□ 1.1
ITGB1-215ENST00000488494 TMOD2Q9NZR1 351 aa21.92■■□□□ 1.1
ITGB1-215ENST00000488494 RCAN3Q9UKA8 241 aa21.92■■□□□ 1.1
ITGB1-215ENST00000488494 DAGLAQ9Y4D2 1042 aa21.92■■□□□ 1.1
ITGB1-215ENST00000488494 PDS5AQ29RF7 1337 aaKnown RBP21.91■■□□□ 1.1
ITGB1-215ENST00000488494 TNNI2P48788 182 aa21.91■■□□□ 1.1
ITGB1-215ENST00000488494 MAP3K11Q16584 847 aa21.91■■□□□ 1.1
ITGB1-215ENST00000488494 TEPSINQ96N21 525 aa21.91■■□□□ 1.1
ITGB1-215ENST00000488494 CSRNP1Q96S65 589 aa21.91■■□□□ 1.1
ITGB1-215ENST00000488494 MRIQ9BWK5 157 aa21.91■■□□□ 1.1
ITGB1-215ENST00000488494 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.91■■□□□ 1.1
ITGB1-215ENST00000488494 ZBTB22O15209 634 aa21.9■■□□□ 1.1
ITGB1-215ENST00000488494 MS4A1P11836 297 aa21.9■■□□□ 1.1
ITGB1-215ENST00000488494 GORABQ5T7V8 394 aa21.9■■□□□ 1.1
ITGB1-215ENST00000488494 CEP85Q6P2H3 762 aa21.9■■□□□ 1.1
ITGB1-215ENST00000488494 CLMNQ96JQ2 1002 aa21.9■■□□□ 1.1
ITGB1-215ENST00000488494 SAGE1Q9NXZ1 904 aa21.9■■□□□ 1.1
ITGB1-215ENST00000488494 SURF6O75683 361 aaKnown RBP21.89■■□□□ 1.09
ITGB1-215ENST00000488494 IREB2P48200 963 aaKnown RBP21.89■■□□□ 1.09
ITGB1-215ENST00000488494 ZGPATQ8N5A5 531 aaKnown RBP21.89■■□□□ 1.09
ITGB1-215ENST00000488494 DZIP1Q86YF9 867 aaKnown RBP21.88■■□□□ 1.09
ITGB1-215ENST00000488494 REM2Q8IYK8 340 aaPredicted RBP21.88■■□□□ 1.09
ITGB1-215ENST00000488494 RNF186Q9NXI6 227 aa21.88■■□□□ 1.09
ITGB1-215ENST00000488494 AKAP11Q9UKA4 1901 aa21.88■■□□□ 1.09
ITGB1-215ENST00000488494 RPAP1Q9BWH6 1393 aaPredicted RBP21.87■■□□□ 1.09
ITGB1-215ENST00000488494 TRPA1O75762 1119 aa21.87■■□□□ 1.09
ITGB1-215ENST00000488494 CAPN15O75808 1086 aa21.87■■□□□ 1.09
ITGB1-215ENST00000488494 TNNI3KQ59H18 835 aa21.87■■□□□ 1.09
ITGB1-215ENST00000488494 SPRYD7Q5W111 196 aa21.87■■□□□ 1.09
ITGB1-215ENST00000488494 PI16Q6UXB8 463 aa21.87■■□□□ 1.09
ITGB1-215ENST00000488494 ABCF2Q9UG63 623 aa21.87■■□□□ 1.09
ITGB1-215ENST00000488494 FPGT-TNNI3KV9GXZ4 949 aa21.87■■□□□ 1.09
ITGB1-215ENST00000488494 USP2O75604 605 aaPredicted RBP21.86■■□□□ 1.09
ITGB1-215ENST00000488494 ARID4AP29374 1257 aaPredicted RBP21.86■■□□□ 1.09
ITGB1-215ENST00000488494 FKBP1CQ5VVH2 108 aa21.86■■□□□ 1.09
ITGB1-215ENST00000488494 FAM83AQ86UY5 434 aa21.86■■□□□ 1.09
ITGB1-215ENST00000488494 SLC10A4Q96EP9 437 aa21.86■■□□□ 1.09
ITGB1-215ENST00000488494 HMG20BQ9P0W2 317 aa21.86■■□□□ 1.09
ITGB1-215ENST00000488494 COG6Q9Y2V7 657 aa21.86■■□□□ 1.09
ITGB1-215ENST00000488494 NOP58Q9Y2X3 529 aaKnown RBP21.86■■□□□ 1.09
ITGB1-215ENST00000488494 LAMB1P07942 1786 aa21.85■■□□□ 1.09
ITGB1-215ENST00000488494 CDC42EP5Q6NZY7 148 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms