RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 COL24A1Q17RW2 1714 aa7.98□□□□□ -1.13
CDHR3-213ENST00000488386 U2SURPO15042 1029 aaKnown RBP7.97□□□□□ -1.13
CDHR3-213ENST00000488386 LGR5O75473 907 aa7.97□□□□□ -1.13
CDHR3-213ENST00000488386 SMTNP53814 917 aa7.97□□□□□ -1.13
CDHR3-213ENST00000488386 MTFR1Q15390 333 aa7.97□□□□□ -1.13
CDHR3-213ENST00000488386 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.97□□□□□ -1.13
CDHR3-213ENST00000488386 ANKMY2Q8IV38 441 aa7.97□□□□□ -1.13
CDHR3-213ENST00000488386 ZNF295-AS1Q8N0V1 137 aa7.97□□□□□ -1.13
CDHR3-213ENST00000488386 TSEN2Q8NCE0 465 aaKnown RBP7.97□□□□□ -1.13
CDHR3-213ENST00000488386 LGR6Q9HBX8 967 aa7.97□□□□□ -1.13
CDHR3-213ENST00000488386 WWC3Q9ULE0 1092 aa7.97□□□□□ -1.13
CDHR3-213ENST00000488386 COL3A1P02461 1466 aaPredicted RBP7.97□□□□□ -1.13
CDHR3-213ENST00000488386 SCN11AQ9UI33 1791 aa7.97□□□□□ -1.13
CDHR3-213ENST00000488386 SENP3-EIF4A1A0A087X0R7 540 aa7.96□□□□□ -1.14
CDHR3-213ENST00000488386 DIAPH1O60610 1272 aaKnown RBP7.96□□□□□ -1.14
CDHR3-213ENST00000488386 POLD1P28340 1107 aa7.96□□□□□ -1.14
CDHR3-213ENST00000488386 CABP4P57796 275 aa7.96□□□□□ -1.14
CDHR3-213ENST00000488386 PTSQ03393 145 aa7.96□□□□□ -1.14
CDHR3-213ENST00000488386 POU4F2Q12837 409 aa7.96□□□□□ -1.14
CDHR3-213ENST00000488386 MTHFSDQ2M296 383 aaKnown RBP7.96□□□□□ -1.14
CDHR3-213ENST00000488386 C1orf141Q5JVX7 400 aa7.96□□□□□ -1.14
CDHR3-213ENST00000488386 TNS4Q8IZW8 715 aa7.96□□□□□ -1.14
CDHR3-213ENST00000488386 STK32AQ8WU08 396 aa7.96□□□□□ -1.14
CDHR3-213ENST00000488386 SMARCC1Q92922 1105 aaPredicted RBP7.96□□□□□ -1.14
CDHR3-213ENST00000488386 ZSCAN10Q96SZ4 725 aaPredicted RBP7.96□□□□□ -1.14
CDHR3-213ENST00000488386 NOVA2Q9UNW9 492 aaKnown RBP7.96□□□□□ -1.14
CDHR3-213ENST00000488386 IQSEC3Q9UPP2 1182 aaPredicted RBP7.96□□□□□ -1.14
CDHR3-213ENST00000488386 KDRP35968 1356 aa7.96□□□□□ -1.14
CDHR3-213ENST00000488386 COL5A3P25940 1745 aaPredicted RBP7.95□□□□□ -1.14
CDHR3-213ENST00000488386 A6NJY4 79 aa7.95□□□□□ -1.14
CDHR3-213ENST00000488386 PTCD1O75127 700 aaKnown RBP7.95□□□□□ -1.14
CDHR3-213ENST00000488386 YY1P25490 414 aa7.95□□□□□ -1.14
CDHR3-213ENST00000488386 SLC39A6Q13433 755 aa7.95□□□□□ -1.14
CDHR3-213ENST00000488386 AMOTQ4VCS5 1084 aa7.95□□□□□ -1.14
CDHR3-213ENST00000488386 TBCELQ5QJ74 424 aa7.95□□□□□ -1.14
CDHR3-213ENST00000488386 NBPF10Q6P3W6 841 aaKnown RBP7.95□□□□□ -1.14
CDHR3-213ENST00000488386 NBPF15Q8N660 670 aa7.95□□□□□ -1.14
CDHR3-213ENST00000488386 DCAF5Q96JK2 942 aa7.95□□□□□ -1.14
CDHR3-213ENST00000488386 MYH14Q7Z406 1995 aaKnown RBP7.95□□□□□ -1.14
CDHR3-213ENST00000488386 TJP1Q07157 1748 aa7.95□□□□□ -1.14
CDHR3-213ENST00000488386 UTRNP46939 3433 aa7.94□□□□□ -1.14
CDHR3-213ENST00000488386 SPATA31C2B4DYI2 1134 aa7.94□□□□□ -1.14
CDHR3-213ENST00000488386 ERVV-2B6SEH9 535 aa7.94□□□□□ -1.14
CDHR3-213ENST00000488386 ATG7O95352 703 aa7.94□□□□□ -1.14
CDHR3-213ENST00000488386 VEGFBP49765 207 aa7.94□□□□□ -1.14
CDHR3-213ENST00000488386 SEC13P55735 322 aa7.94□□□□□ -1.14
CDHR3-213ENST00000488386 FOXK2Q01167 660 aa7.94□□□□□ -1.14
CDHR3-213ENST00000488386 C4orf17Q53FE4 359 aa7.94□□□□□ -1.14
CDHR3-213ENST00000488386 SLC16A10Q8TF71 515 aa7.94□□□□□ -1.14
CDHR3-213ENST00000488386 BACH1O14867 736 aa7.93□□□□□ -1.14
CDHR3-213ENST00000488386 RNMTO43148 476 aaKnown RBP7.93□□□□□ -1.14
CDHR3-213ENST00000488386 HSP90AB1P08238 724 aaKnown RBP7.93□□□□□ -1.14
CDHR3-213ENST00000488386 PPP2R1AP30153 589 aa7.93□□□□□ -1.14
CDHR3-213ENST00000488386 PHKA2P46019 1235 aa7.93□□□□□ -1.14
CDHR3-213ENST00000488386 AKAP4Q5JQC9 854 aa7.93□□□□□ -1.14
CDHR3-213ENST00000488386 TMEM214Q6NUQ4 689 aaKnown RBP7.93□□□□□ -1.14
CDHR3-213ENST00000488386 GAS2L2Q8NHY3 880 aa7.93□□□□□ -1.14
CDHR3-213ENST00000488386 TSPAN10Q9H1Z9 355 aaPredicted RBP7.93□□□□□ -1.14
CDHR3-213ENST00000488386 SCHIP1Q9P0W5 487 aaPredicted RBP7.93□□□□□ -1.14
CDHR3-213ENST00000488386 C4AP0C0L4 1744 aa7.92□□□□□ -1.14
CDHR3-213ENST00000488386 SLC35F4A4IF30 521 aa7.92□□□□□ -1.14
CDHR3-213ENST00000488386 M0R2N6 131 aa7.92□□□□□ -1.14
CDHR3-213ENST00000488386 GPR162Q16538 588 aa7.92□□□□□ -1.14
CDHR3-213ENST00000488386 LCE2CQ5TA81 110 aa7.92□□□□□ -1.14
CDHR3-213ENST00000488386 TMEM164Q5U3C3 297 aa7.92□□□□□ -1.14
CDHR3-213ENST00000488386 SLC9A9Q8IVB4 645 aa7.92□□□□□ -1.14
CDHR3-213ENST00000488386 RHBDD1Q8TEB9 315 aa7.92□□□□□ -1.14
CDHR3-213ENST00000488386 ZDHHC1Q8WTX9 485 aa7.92□□□□□ -1.14
CDHR3-213ENST00000488386 PHACTR3Q96KR7 559 aa7.92□□□□□ -1.14
CDHR3-213ENST00000488386 NPC1L1Q9UHC9 1359 aa7.92□□□□□ -1.14
CDHR3-213ENST00000488386 CDK2AP1O14519 115 aa7.91□□□□□ -1.14
CDHR3-213ENST00000488386 C21orf2O43822 256 aa7.91□□□□□ -1.14
CDHR3-213ENST00000488386 YBX3P16989 372 aaKnown RBP eCLIP7.91□□□□□ -1.14
CDHR3-213ENST00000488386 SSFA2P28290 1259 aa7.91□□□□□ -1.14
CDHR3-213ENST00000488386 PRKAR2BP31323 418 aa7.91□□□□□ -1.14
CDHR3-213ENST00000488386 PLA2G4AP47712 749 aa7.91□□□□□ -1.14
CDHR3-213ENST00000488386 ELOAQ14241 798 aaKnown RBP7.91□□□□□ -1.14
CDHR3-213ENST00000488386 SH3PXD2AQ5TCZ1 1133 aa7.91□□□□□ -1.14
CDHR3-213ENST00000488386 TAS1R3Q7RTX0 852 aa7.91□□□□□ -1.14
CDHR3-213ENST00000488386 DNAJC10Q8IXB1 793 aa7.91□□□□□ -1.14
CDHR3-213ENST00000488386 CCDC155Q8N6L0 562 aa7.91□□□□□ -1.14
CDHR3-213ENST00000488386 ZNF775Q96BV0 537 aaPredicted RBP7.91□□□□□ -1.14
CDHR3-213ENST00000488386 SLC52A2Q9HAB3 445 aa7.91□□□□□ -1.14
CDHR3-213ENST00000488386 SRP68Q9UHB9 627 aaKnown RBP7.91□□□□□ -1.14
CDHR3-213ENST00000488386 MAP3K5Q99683 1374 aa7.91□□□□□ -1.14
CDHR3-213ENST00000488386 N4BP2Q86UW6 1770 aaPredicted RBP7.9□□□□□ -1.14
CDHR3-213ENST00000488386 ZNF831Q5JPB2 1677 aa7.9□□□□□ -1.14
CDHR3-213ENST00000488386 ADAMTS7Q9UKP4 1686 aa7.9□□□□□ -1.14
CDHR3-213ENST00000488386 CICQ96RK0 1608 aaPredicted RBP7.9□□□□□ -1.14
CDHR3-213ENST00000488386 KCPQ6ZWJ8 1503 aa7.9□□□□□ -1.14
CDHR3-213ENST00000488386 MRC1P22897 1456 aa7.9□□□□□ -1.14
CDHR3-213ENST00000488386 PLEKHG2Q9H7P9 1386 aa7.9□□□□□ -1.14
CDHR3-213ENST00000488386 KCNQ3O43525 872 aa7.9□□□□□ -1.14
CDHR3-213ENST00000488386 PPFIA3O75145 1194 aa7.9□□□□□ -1.14
CDHR3-213ENST00000488386 CRKLP46109 303 aaKnown RBP7.9□□□□□ -1.14
CDHR3-213ENST00000488386 GNASQ5JWF2 1037 aa7.9□□□□□ -1.14
CDHR3-213ENST00000488386 TRAPPC3LQ5T215 181 aa7.9□□□□□ -1.14
CDHR3-213ENST00000488386 FLAD1Q8NFF5 587 aa7.9□□□□□ -1.14
CDHR3-213ENST00000488386 IL17REQ8NFR9 667 aa7.9□□□□□ -1.14
CDHR3-213ENST00000488386 FAM200AQ8TCP9 573 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms