RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 DENND2AQ9ULE3 1009 aa29.21■■■□□ 2.27
RHBDD3-205ENST00000488106 SEMA3EO15041 775 aa29.2■■■□□ 2.26
RHBDD3-205ENST00000488106 VEZTQ9HBM0 779 aa29.2■■■□□ 2.26
RHBDD3-205ENST00000488106 EXOC6BQ9Y2D4 811 aa29.2■■■□□ 2.26
RHBDD3-205ENST00000488106 NOP58Q9Y2X3 529 aaKnown RBP29.2■■■□□ 2.26
RHBDD3-205ENST00000488106 MAST3O60307 1309 aa29.2■■■□□ 2.26
RHBDD3-205ENST00000488106 RASGRF1Q13972 1273 aa29.19■■■□□ 2.26
RHBDD3-205ENST00000488106 MAST2Q6P0Q8 1798 aa29.18■■■□□ 2.26
RHBDD3-205ENST00000488106 TNNI3KQ59H18 835 aa29.18■■■□□ 2.26
RHBDD3-205ENST00000488106 CYP4F22Q6NT55 531 aa29.18■■■□□ 2.26
RHBDD3-205ENST00000488106 C2orf69Q8N8R5 385 aa29.18■■■□□ 2.26
RHBDD3-205ENST00000488106 TEKT1Q969V4 418 aa29.18■■■□□ 2.26
RHBDD3-205ENST00000488106 FPGT-TNNI3KV9GXZ4 949 aa29.18■■■□□ 2.26
RHBDD3-205ENST00000488106 OTOFQ9HC10 1997 aa29.17■■■□□ 2.26
RHBDD3-205ENST00000488106 RRP1P56182 461 aaKnown RBP29.17■■■□□ 2.26
RHBDD3-205ENST00000488106 HUNKP57058 714 aa29.17■■■□□ 2.26
RHBDD3-205ENST00000488106 SUGT1Q9Y2Z0 365 aa29.17■■■□□ 2.26
RHBDD3-205ENST00000488106 PRDX5P30044 214 aa29.16■■■□□ 2.26
RHBDD3-205ENST00000488106 RPAP2Q8IXW5 612 aaPredicted RBP29.16■■■□□ 2.26
RHBDD3-205ENST00000488106 CAPNS2Q96L46 248 aa29.16■■■□□ 2.26
RHBDD3-205ENST00000488106 TDRD3Q9H7E2 651 aaKnown RBP29.16■■■□□ 2.26
RHBDD3-205ENST00000488106 GPR108Q9NPR9 543 aa29.16■■■□□ 2.26
RHBDD3-205ENST00000488106 WDR33Q9C0J8 1336 aaKnown RBP29.16■■■□□ 2.26
RHBDD3-205ENST00000488106 HMMRO75330 724 aa29.15■■■□□ 2.26
RHBDD3-205ENST00000488106 SALL1Q9NSC2 1324 aa29.15■■■□□ 2.26
RHBDD3-205ENST00000488106 HDLBPQ00341 1268 aaKnown RBP29.14■■■□□ 2.26
RHBDD3-205ENST00000488106 SPDYE2Q495Y8 402 aa29.14■■■□□ 2.26
RHBDD3-205ENST00000488106 SIRT2Q8IXJ6 389 aa29.14■■■□□ 2.26
RHBDD3-205ENST00000488106 DBNDD2Q9BQY9 259 aa29.14■■■□□ 2.26
RHBDD3-205ENST00000488106 ZNF70Q9UC06 446 aaPredicted RBP29.14■■■□□ 2.26
RHBDD3-205ENST00000488106 LDHBP07195 334 aaKnown RBP29.13■■■□□ 2.25
RHBDD3-205ENST00000488106 ECE1P42892 770 aa29.13■■■□□ 2.25
RHBDD3-205ENST00000488106 DEFB129Q9H1M3 183 aa29.13■■■□□ 2.25
RHBDD3-205ENST00000488106 PDS5AQ29RF7 1337 aaKnown RBP29.13■■■□□ 2.25
RHBDD3-205ENST00000488106 NF2P35240 595 aa29.12■■■□□ 2.25
RHBDD3-205ENST00000488106 DIXDC1Q155Q3 683 aa29.12■■■□□ 2.25
RHBDD3-205ENST00000488106 PI16Q6UXB8 463 aa29.12■■■□□ 2.25
RHBDD3-205ENST00000488106 ERC1Q8IUD2 1116 aa29.12■■■□□ 2.25
RHBDD3-205ENST00000488106 ABCF2Q9UG63 623 aa29.12■■■□□ 2.25
RHBDD3-205ENST00000488106 APBB1O00213 710 aa29.11■■■□□ 2.25
RHBDD3-205ENST00000488106 ARID4AP29374 1257 aaPredicted RBP29.11■■■□□ 2.25
RHBDD3-205ENST00000488106 TTLL12Q14166 644 aaPredicted RBP29.11■■■□□ 2.25
RHBDD3-205ENST00000488106 ZGPATQ8N5A5 531 aaKnown RBP29.11■■■□□ 2.25
RHBDD3-205ENST00000488106 HHIPL1Q96JK4 782 aa29.11■■■□□ 2.25
RHBDD3-205ENST00000488106 ZDHHC15Q96MV8 337 aa29.11■■■□□ 2.25
RHBDD3-205ENST00000488106 TLR7Q9NYK1 1049 aaKnown RBP29.11■■■□□ 2.25
RHBDD3-205ENST00000488106 DOCK2Q92608 1830 aa29.1■■■□□ 2.25
RHBDD3-205ENST00000488106 SSC5DA1L4H1 1573 aa29.1■■■□□ 2.25
RHBDD3-205ENST00000488106 ZBTB22O15209 634 aa29.1■■■□□ 2.25
RHBDD3-205ENST00000488106 HSP90AB4PQ58FF6 505 aa29.1■■■□□ 2.25
RHBDD3-205ENST00000488106 TTC39AQ5SRH9 613 aa29.1■■■□□ 2.25
RHBDD3-205ENST00000488106 MOB2Q70IA6 237 aa29.1■■■□□ 2.25
RHBDD3-205ENST00000488106 SPATA5Q8NB90 893 aa29.1■■■□□ 2.25
RHBDD3-205ENST00000488106 HMG20BQ9P0W2 317 aa29.1■■■□□ 2.25
RHBDD3-205ENST00000488106 CDK5RAP2Q96SN8 1893 aa29.1■■■□□ 2.25
RHBDD3-205ENST00000488106 TCP10L2B9ZVM9 353 aa29.09■■■□□ 2.25
RHBDD3-205ENST00000488106 UQCRFS1P1P0C7P4 283 aa29.09■■■□□ 2.25
RHBDD3-205ENST00000488106 HHIPL2Q6UWX4 724 aa29.09■■■□□ 2.25
RHBDD3-205ENST00000488106 CCDC8Q9H0W5 538 aaPredicted RBP29.09■■■□□ 2.25
RHBDD3-205ENST00000488106 DBNLQ9UJU6 430 aaKnown RBP29.09■■■□□ 2.25
RHBDD3-205ENST00000488106 PPP2R3BQ9Y5P8 575 aa29.09■■■□□ 2.25
RHBDD3-205ENST00000488106 AOC2O75106 756 aa29.08■■■□□ 2.25
RHBDD3-205ENST00000488106 HSPA1AP0DMV8 641 aaKnown RBP29.08■■■□□ 2.25
RHBDD3-205ENST00000488106 HSPA1BP0DMV9 641 aaKnown RBP29.08■■■□□ 2.25
RHBDD3-205ENST00000488106 MCAMP43121 646 aa29.08■■■□□ 2.25
RHBDD3-205ENST00000488106 CACNB3P54284 484 aa29.08■■■□□ 2.25
RHBDD3-205ENST00000488106 TNFAIP1Q13829 316 aa29.08■■■□□ 2.25
RHBDD3-205ENST00000488106 PRKG1Q13976 671 aa29.08■■■□□ 2.25
RHBDD3-205ENST00000488106 CCDC158Q5M9N0 1113 aa29.08■■■□□ 2.25
RHBDD3-205ENST00000488106 DZIP1Q86YF9 867 aaKnown RBP29.08■■■□□ 2.25
RHBDD3-205ENST00000488106 EAF2Q96CJ1 260 aaPredicted RBP29.08■■■□□ 2.25
RHBDD3-205ENST00000488106 IL1RAPL2Q9NP60 686 aa29.08■■■□□ 2.25
RHBDD3-205ENST00000488106 DAGLAQ9Y4D2 1042 aa29.08■■■□□ 2.25
RHBDD3-205ENST00000488106 FKBP1BP68106 108 aa29.07■■■□□ 2.24
RHBDD3-205ENST00000488106 RASA3Q14644 834 aa29.07■■■□□ 2.24
RHBDD3-205ENST00000488106 MRIQ9BWK5 157 aa29.07■■■□□ 2.24
RHBDD3-205ENST00000488106 BCL11AQ9H165 835 aa29.07■■■□□ 2.24
RHBDD3-205ENST00000488106 APOBEC3HQ6NTF7 200 aaKnown RBP29.06■■■□□ 2.24
RHBDD3-205ENST00000488106 RGMBQ6NW40 437 aa29.06■■■□□ 2.24
RHBDD3-205ENST00000488106 AACSQ86V21 672 aa29.06■■■□□ 2.24
RHBDD3-205ENST00000488106 RHPN1Q8TCX5 695 aa29.06■■■□□ 2.24
RHBDD3-205ENST00000488106 SNRKQ9NRH2 765 aa29.06■■■□□ 2.24
RHBDD3-205ENST00000488106 TMOD2Q9NZR1 351 aa29.06■■■□□ 2.24
RHBDD3-205ENST00000488106 UBE2Q2LH0YL09 131 aa29.05■■■□□ 2.24
RHBDD3-205ENST00000488106 ZNF157P51786 506 aaPredicted RBP29.05■■■□□ 2.24
RHBDD3-205ENST00000488106 SPTY2D1Q68D10 685 aaPredicted RBP29.05■■■□□ 2.24
RHBDD3-205ENST00000488106 FZD1Q9UP38 647 aa29.05■■■□□ 2.24
RHBDD3-205ENST00000488106 MYH7P12883 1935 aa29.04■■■□□ 2.24
RHBDD3-205ENST00000488106 TBC1D9Q6ZT07 1266 aa29.04■■■□□ 2.24
RHBDD3-205ENST00000488106 ERICH6Q7L0X2 663 aa29.04■■■□□ 2.24
RHBDD3-205ENST00000488106 TNNI2P48788 182 aa29.03■■■□□ 2.24
RHBDD3-205ENST00000488106 NBPF12Q5TAG4 269 aaPredicted RBP29.03■■■□□ 2.24
RHBDD3-205ENST00000488106 KIF1BPQ96EK5 621 aa29.03■■■□□ 2.24
RHBDD3-205ENST00000488106 FOCADQ5VW36 1801 aa29.03■■■□□ 2.24
RHBDD3-205ENST00000488106 CDAN1Q8IWY9 1227 aa29.02■■■□□ 2.24
RHBDD3-205ENST00000488106 TMEM39BQ9GZU3 492 aa29.02■■■□□ 2.24
RHBDD3-205ENST00000488106 ANGEL1Q9UNK9 670 aaKnown RBP29.02■■■□□ 2.24
RHBDD3-205ENST00000488106 LAMB1P07942 1786 aa29.02■■■□□ 2.24
RHBDD3-205ENST00000488106 MECOMQ03112 1051 aa29.01■■■□□ 2.23
RHBDD3-205ENST00000488106 ARMC9Q7Z3E5 817 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms