RNA–Protein interactions for RNA: ENST00000488032.1

PCGF3-212, Transcript of polycomb group ring finger 3, humanhuman

TSL 4

Gene PCGF3, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-212ENST00000488032 SETDB1Q15047 1291 aa5.73□□□□□ -1.49
PCGF3-212ENST00000488032 SPRED3Q2MJR0 410 aa5.73□□□□□ -1.49
PCGF3-212ENST00000488032 HSP90AB4PQ58FF6 505 aa5.73□□□□□ -1.49
PCGF3-212ENST00000488032 FBXO11Q86XK2 927 aa5.73□□□□□ -1.49
PCGF3-212ENST00000488032 KLHL23Q8NBE8 558 aa5.73□□□□□ -1.49
PCGF3-212ENST00000488032 SOX17Q9H6I2 414 aaPredicted RBP5.73□□□□□ -1.49
PCGF3-212ENST00000488032 MRS2Q9HD23 443 aa5.73□□□□□ -1.49
PCGF3-212ENST00000488032 OSGEPQ9NPF4 335 aa5.73□□□□□ -1.49
PCGF3-212ENST00000488032 SEC31BQ9NQW1 1179 aa5.73□□□□□ -1.49
PCGF3-212ENST00000488032 PPM1HQ9ULR3 514 aa5.73□□□□□ -1.49
PCGF3-212ENST00000488032 FSCN2O14926 492 aa5.72□□□□□ -1.49
PCGF3-212ENST00000488032 SORBS3O60504 671 aa5.72□□□□□ -1.49
PCGF3-212ENST00000488032 DEAF1O75398 565 aaPredicted RBP5.72□□□□□ -1.49
PCGF3-212ENST00000488032 ESRRAP11474 423 aaPredicted RBP5.72□□□□□ -1.49
PCGF3-212ENST00000488032 TAGLNQ01995 201 aaKnown RBP5.72□□□□□ -1.49
PCGF3-212ENST00000488032 PCDH1Q08174 1060 aa5.72□□□□□ -1.49
PCGF3-212ENST00000488032 HSP90AA2PQ14568 343 aaPredicted RBP5.72□□□□□ -1.49
PCGF3-212ENST00000488032 TXNDC11Q6PKC3 985 aa5.72□□□□□ -1.49
PCGF3-212ENST00000488032 C3orf58Q8NDZ4 430 aa5.72□□□□□ -1.49
PCGF3-212ENST00000488032 DDX54Q8TDD1 881 aaKnown RBP5.72□□□□□ -1.49
PCGF3-212ENST00000488032 ANKRD24Q8TF21 1146 aa5.72□□□□□ -1.49
PCGF3-212ENST00000488032 SECISBP2LQ93073 1101 aaKnown RBP5.72□□□□□ -1.49
PCGF3-212ENST00000488032 NACC1Q96RE7 527 aa5.72□□□□□ -1.49
PCGF3-212ENST00000488032 PCGF6Q9BYE7 350 aa5.72□□□□□ -1.49
PCGF3-212ENST00000488032 FAM229AH3BQW9 127 aa5.71□□□□□ -1.5
PCGF3-212ENST00000488032 B3GALT4O96024 378 aa5.71□□□□□ -1.5
PCGF3-212ENST00000488032 USP17L7P0C7H9 530 aa5.71□□□□□ -1.5
PCGF3-212ENST00000488032 CDC25BP30305 580 aa5.71□□□□□ -1.5
PCGF3-212ENST00000488032 C19orf57Q0VDD7 668 aa5.71□□□□□ -1.5
PCGF3-212ENST00000488032 DLL1O00548 723 aa5.7□□□□□ -1.5
PCGF3-212ENST00000488032 SOX1O00570 391 aaPredicted RBP5.7□□□□□ -1.5
PCGF3-212ENST00000488032 APBA3O96018 575 aa5.7□□□□□ -1.5
PCGF3-212ENST00000488032 CD68P34810 354 aaPredicted RBP5.7□□□□□ -1.5
PCGF3-212ENST00000488032 IRX6P78412 446 aaPredicted RBP5.7□□□□□ -1.5
PCGF3-212ENST00000488032 SUZ12Q15022 739 aaKnown RBP5.7□□□□□ -1.5
PCGF3-212ENST00000488032 IGF2-ASQ6U949 168 aa5.7□□□□□ -1.5
PCGF3-212ENST00000488032 SLC7A3Q8WY07 619 aa5.7□□□□□ -1.5
PCGF3-212ENST00000488032 CRELD1Q96HD1 420 aa5.7□□□□□ -1.5
PCGF3-212ENST00000488032 FAM161BQ96MY7 647 aa5.7□□□□□ -1.5
PCGF3-212ENST00000488032 CARD10Q9BWT7 1032 aa5.7□□□□□ -1.5
PCGF3-212ENST00000488032 CEP44Q9C0F1 390 aa5.7□□□□□ -1.5
PCGF3-212ENST00000488032 CHMP4BQ9H444 224 aaKnown RBP5.7□□□□□ -1.5
PCGF3-212ENST00000488032 PRDM10Q9NQV6 1147 aa5.7□□□□□ -1.5
PCGF3-212ENST00000488032 RNF19AQ9NV58 838 aa5.7□□□□□ -1.5
PCGF3-212ENST00000488032 USP35Q9P2H5 1018 aa5.7□□□□□ -1.5
PCGF3-212ENST00000488032 VTI1BQ9UEU0 232 aa5.7□□□□□ -1.5
PCGF3-212ENST00000488032 AKAP2Q9Y2D5 859 aa5.7□□□□□ -1.5
PCGF3-212ENST00000488032 TM4SF5O14894 197 aa5.69□□□□□ -1.5
PCGF3-212ENST00000488032 RASSF7Q02833 373 aa5.69□□□□□ -1.5
PCGF3-212ENST00000488032 PPP2R3AQ06190 1150 aa5.69□□□□□ -1.5
PCGF3-212ENST00000488032 ZNF423Q2M1K9 1284 aa5.69□□□□□ -1.5
PCGF3-212ENST00000488032 TAF3Q5VWG9 929 aa5.69□□□□□ -1.5
PCGF3-212ENST00000488032 CASC1Q6TDU7 716 aa5.69□□□□□ -1.5
PCGF3-212ENST00000488032 GALNT11Q8NCW6 608 aa5.69□□□□□ -1.5
PCGF3-212ENST00000488032 FOXD4L4Q8WXT5 416 aaPredicted RBP5.69□□□□□ -1.5
PCGF3-212ENST00000488032 DCAF5Q96JK2 942 aa5.69□□□□□ -1.5
PCGF3-212ENST00000488032 CWC22Q9HCG8 908 aaKnown RBP5.69□□□□□ -1.5
PCGF3-212ENST00000488032 GPN3Q9UHW5 284 aaPredicted RBP5.69□□□□□ -1.5
PCGF3-212ENST00000488032 C9orf172C9J069 976 aa5.68□□□□□ -1.5
PCGF3-212ENST00000488032 NRG1Q02297 640 aaPredicted RBP5.68□□□□□ -1.5
PCGF3-212ENST00000488032 FAAP100Q0VG06 881 aa5.68□□□□□ -1.5
PCGF3-212ENST00000488032 AP3B2Q13367 1082 aa5.68□□□□□ -1.5
PCGF3-212ENST00000488032 MRPL58Q14197 206 aaKnown RBP5.68□□□□□ -1.5
PCGF3-212ENST00000488032 FOXD4L6Q3SYB3 417 aaPredicted RBP5.68□□□□□ -1.5
PCGF3-212ENST00000488032 FOXD4L3Q6VB84 417 aaPredicted RBP5.68□□□□□ -1.5
PCGF3-212ENST00000488032 ZNF526Q8TF50 670 aaPredicted RBP5.68□□□□□ -1.5
PCGF3-212ENST00000488032 LENG1Q96BZ8 264 aaPredicted RBP5.68□□□□□ -1.5
PCGF3-212ENST00000488032 KLHDC7BQ96G42 594 aa5.68□□□□□ -1.5
PCGF3-212ENST00000488032 MRPL18Q9H0U6 180 aaKnown RBP5.68□□□□□ -1.5
PCGF3-212ENST00000488032 TMEM39AQ9NV64 488 aa5.68□□□□□ -1.5
PCGF3-212ENST00000488032 TTF2Q9UNY4 1162 aaKnown RBP5.68□□□□□ -1.5
PCGF3-212ENST00000488032 E9PSI1 815 aa5.67□□□□□ -1.5
PCGF3-212ENST00000488032 CYP11A1P05108 521 aa5.67□□□□□ -1.5
PCGF3-212ENST00000488032 VAMP1P23763 118 aa5.67□□□□□ -1.5
PCGF3-212ENST00000488032 GSK3AP49840 483 aa5.67□□□□□ -1.5
PCGF3-212ENST00000488032 ST13P50502 369 aaKnown RBP5.67□□□□□ -1.5
PCGF3-212ENST00000488032 GSTM4Q03013 218 aa5.67□□□□□ -1.5
PCGF3-212ENST00000488032 OS9Q13438 667 aaPredicted RBP5.67□□□□□ -1.5
PCGF3-212ENST00000488032 GRIK4Q16099 956 aa5.67□□□□□ -1.5
PCGF3-212ENST00000488032 HP1BP3Q5SSJ5 553 aaPredicted RBP5.67□□□□□ -1.5
PCGF3-212ENST00000488032 TMED8Q6PL24 325 aaPredicted RBP5.67□□□□□ -1.5
PCGF3-212ENST00000488032 PRDM16Q9HAZ2 1276 aa5.67□□□□□ -1.5
PCGF3-212ENST00000488032 KRBA1A5PL33 1030 aa5.66□□□□□ -1.5
PCGF3-212ENST00000488032 NRDCO43847 1150 aa5.66□□□□□ -1.5
PCGF3-212ENST00000488032 ADAM11O75078 769 aa5.66□□□□□ -1.5
PCGF3-212ENST00000488032 GDF11O95390 407 aa5.66□□□□□ -1.5
PCGF3-212ENST00000488032 CTSHP09668 335 aa5.66□□□□□ -1.5
PCGF3-212ENST00000488032 SELPP16109 830 aa5.66□□□□□ -1.5
PCGF3-212ENST00000488032 CALRP27797 417 aaKnown RBP5.66□□□□□ -1.5
PCGF3-212ENST00000488032 NLRP12P59046 1061 aa5.66□□□□□ -1.5
PCGF3-212ENST00000488032 IRX3P78415 501 aaPredicted RBP5.66□□□□□ -1.5
PCGF3-212ENST00000488032 HGSNATQ68CP4 663 aa5.66□□□□□ -1.5
PCGF3-212ENST00000488032 TPTE2Q6XPS3 522 aa5.66□□□□□ -1.5
PCGF3-212ENST00000488032 SV2BQ7L1I2 683 aa5.66□□□□□ -1.5
PCGF3-212ENST00000488032 FAM177A1Q8N128 213 aaPredicted RBP5.66□□□□□ -1.5
PCGF3-212ENST00000488032 TMEM151AQ8N4L1 468 aa5.66□□□□□ -1.5
PCGF3-212ENST00000488032 NECAB3Q96P71 396 aaPredicted RBP5.66□□□□□ -1.5
PCGF3-212ENST00000488032 NRSN2Q9GZP1 204 aa5.66□□□□□ -1.5
PCGF3-212ENST00000488032 USP21Q9UK80 565 aa5.66□□□□□ -1.5
PCGF3-212ENST00000488032 SAMM50Q9Y512 469 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms