RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 CRKP46108 304 aa14.02□□□□□ -0.17
RAB11FIP3-210ENST00000487899 RGS19P49795 217 aa14.02□□□□□ -0.17
RAB11FIP3-210ENST00000487899 CAVIN4Q5BKX8 364 aa14.02□□□□□ -0.17
RAB11FIP3-210ENST00000487899 VPS37DQ86XT2 251 aa14.02□□□□□ -0.17
RAB11FIP3-210ENST00000487899 DZIP1LQ8IYY4 767 aaKnown RBP14.02□□□□□ -0.17
RAB11FIP3-210ENST00000487899 FBXO3Q9UK99 471 aa14.02□□□□□ -0.17
RAB11FIP3-210ENST00000487899 PA2G4Q9UQ80 394 aaKnown RBP14.02□□□□□ -0.17
RAB11FIP3-210ENST00000487899 DOCK1Q14185 1865 aa14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 PHIPQ8WWQ0 1821 aa14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 RBBP6Q7Z6E9 1792 aaKnown RBP14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 TRPA1O75762 1119 aa14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 BCAR3O75815 825 aa14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 IFIT1P09914 478 aaKnown RBP14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 RBM5P52756 815 aaKnown RBP eCLIP14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 RASA3Q14644 834 aa14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 NBPF12Q5TAG4 269 aaPredicted RBP14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 ARMC9Q7Z3E5 817 aa14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 TBC1D22AQ8WUA7 517 aa14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 LPIN2Q92539 896 aa14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 CLMNQ96JQ2 1002 aa14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 TEPSINQ96N21 525 aa14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 TDRD3Q9H7E2 651 aaKnown RBP14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 ZNF70Q9UC06 446 aaPredicted RBP14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 ANGEL1Q9UNK9 670 aaKnown RBP14.01□□□□□ -0.17
RAB11FIP3-210ENST00000487899 RPAP1Q9BWH6 1393 aaPredicted RBP14□□□□□ -0.17
RAB11FIP3-210ENST00000487899 SIPA1L1O43166 1804 aa14□□□□□ -0.17
RAB11FIP3-210ENST00000487899 SLC5A1P13866 664 aa14□□□□□ -0.17
RAB11FIP3-210ENST00000487899 MKRN3Q13064 507 aaKnown RBP14□□□□□ -0.17
RAB11FIP3-210ENST00000487899 MTX1Q13505 466 aa14□□□□□ -0.17
RAB11FIP3-210ENST00000487899 ATP2B3Q16720 1220 aa14□□□□□ -0.17
RAB11FIP3-210ENST00000487899 REM2Q8IYK8 340 aaPredicted RBP14□□□□□ -0.17
RAB11FIP3-210ENST00000487899 MCOLN1Q9GZU1 580 aa14□□□□□ -0.17
RAB11FIP3-210ENST00000487899 COPRSQ9NQ92 184 aa14□□□□□ -0.17
RAB11FIP3-210ENST00000487899 HDLBPQ00341 1268 aaKnown RBP13.99□□□□□ -0.17
RAB11FIP3-210ENST00000487899 HNRNPUQ00839 825 aaKnown RBP eCLIP13.99□□□□□ -0.17
RAB11FIP3-210ENST00000487899 TNFAIP1Q13829 316 aa13.99□□□□□ -0.17
RAB11FIP3-210ENST00000487899 SPRYD7Q5W111 196 aa13.99□□□□□ -0.17
RAB11FIP3-210ENST00000487899 DIEXFQ68CQ4 756 aaKnown RBP13.99□□□□□ -0.17
RAB11FIP3-210ENST00000487899 ATF7IPQ6VMQ6 1270 aa13.99□□□□□ -0.17
RAB11FIP3-210ENST00000487899 RFX7Q2KHR2 1363 aa13.98□□□□□ -0.17
RAB11FIP3-210ENST00000487899 ADORA1P30542 326 aa13.98□□□□□ -0.17
RAB11FIP3-210ENST00000487899 IL15P40933 162 aaPredicted RBP13.98□□□□□ -0.17
RAB11FIP3-210ENST00000487899 PHKA1P46020 1223 aa13.98□□□□□ -0.17
RAB11FIP3-210ENST00000487899 CACNB3P54284 484 aa13.98□□□□□ -0.17
RAB11FIP3-210ENST00000487899 TEKT1Q969V4 418 aa13.98□□□□□ -0.17
RAB11FIP3-210ENST00000487899 WNK4Q96J92 1243 aa13.98□□□□□ -0.17
RAB11FIP3-210ENST00000487899 ZDHHC15Q96MV8 337 aa13.98□□□□□ -0.17
RAB11FIP3-210ENST00000487899 TMEM39BQ9GZU3 492 aa13.98□□□□□ -0.17
RAB11FIP3-210ENST00000487899 SUGT1Q9Y2Z0 365 aa13.98□□□□□ -0.17
RAB11FIP3-210ENST00000487899 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.98□□□□□ -0.17
RAB11FIP3-210ENST00000487899 MAST3O60307 1309 aa13.97□□□□□ -0.17
RAB11FIP3-210ENST00000487899 TCP10L2B9ZVM9 353 aa13.97□□□□□ -0.17
RAB11FIP3-210ENST00000487899 FRAT2O75474 233 aaPredicted RBP13.97□□□□□ -0.17
RAB11FIP3-210ENST00000487899 GNAI3P08754 354 aa13.97□□□□□ -0.17
RAB11FIP3-210ENST00000487899 GJA5P36382 358 aa13.97□□□□□ -0.17
RAB11FIP3-210ENST00000487899 TM4SF4P48230 202 aa13.97□□□□□ -0.17
RAB11FIP3-210ENST00000487899 DGKZQ13574 1117 aa13.97□□□□□ -0.17
RAB11FIP3-210ENST00000487899 APOBEC3HQ6NTF7 200 aaKnown RBP13.97□□□□□ -0.17
RAB11FIP3-210ENST00000487899 MKI67P46013 3256 aaKnown RBP13.97□□□□□ -0.17
RAB11FIP3-210ENST00000487899 ZBED9Q6R2W3 1325 aa13.96□□□□□ -0.17
RAB11FIP3-210ENST00000487899 SALL1Q9NSC2 1324 aa13.96□□□□□ -0.17
RAB11FIP3-210ENST00000487899 ZBTB22O15209 634 aa13.96□□□□□ -0.17
RAB11FIP3-210ENST00000487899 SRGAP3O43295 1099 aa13.96□□□□□ -0.17
RAB11FIP3-210ENST00000487899 PPP1R12BO60237 982 aaPredicted RBP13.96□□□□□ -0.17
RAB11FIP3-210ENST00000487899 USP2O75604 605 aaPredicted RBP13.96□□□□□ -0.17
RAB11FIP3-210ENST00000487899 ZBTB48P10074 688 aaPredicted RBP13.96□□□□□ -0.17
RAB11FIP3-210ENST00000487899 PRDX5P30044 214 aa13.96□□□□□ -0.17
RAB11FIP3-210ENST00000487899 SREBF2Q12772 1141 aa13.96□□□□□ -0.17
RAB11FIP3-210ENST00000487899 SUPT20HL1Q3ZLR7 823 aa13.96□□□□□ -0.17
RAB11FIP3-210ENST00000487899 FRAT1Q92837 279 aaPredicted RBP13.96□□□□□ -0.17
RAB11FIP3-210ENST00000487899 CLUAP1Q96AJ1 413 aa13.96□□□□□ -0.17
RAB11FIP3-210ENST00000487899 CFHR5Q9BXR6 569 aa13.96□□□□□ -0.17
RAB11FIP3-210ENST00000487899 CEP126Q9P2H0 1117 aa13.96□□□□□ -0.17
RAB11FIP3-210ENST00000487899 UNCXA6NJT0 531 aa13.95□□□□□ -0.18
RAB11FIP3-210ENST00000487899 DIXDC1Q155Q3 683 aa13.95□□□□□ -0.18
RAB11FIP3-210ENST00000487899 HHIPL2Q6UWX4 724 aa13.95□□□□□ -0.18
RAB11FIP3-210ENST00000487899 TMEM57Q8N5G2 664 aa13.95□□□□□ -0.18
RAB11FIP3-210ENST00000487899 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.95□□□□□ -0.18
RAB11FIP3-210ENST00000487899 WDR66Q8TBY9 1149 aa13.95□□□□□ -0.18
RAB11FIP3-210ENST00000487899 R3HDMLQ9H3Y0 253 aa13.95□□□□□ -0.18
RAB11FIP3-210ENST00000487899 HDAC5Q9UQL6 1122 aa13.95□□□□□ -0.18
RAB11FIP3-210ENST00000487899 DAGLAQ9Y4D2 1042 aa13.95□□□□□ -0.18
RAB11FIP3-210ENST00000487899 PDS5AQ29RF7 1337 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP3-210ENST00000487899 PNMA6EA0A0J9YXQ4 647 aa13.94□□□□□ -0.18
RAB11FIP3-210ENST00000487899 IGF2BP3O00425 579 aaKnown RBP eCLIP13.94□□□□□ -0.18
RAB11FIP3-210ENST00000487899 IPO8O15397 1037 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP3-210ENST00000487899 MGAMO43451 1857 aa13.94□□□□□ -0.18
RAB11FIP3-210ENST00000487899 TBC1D8O95759 1140 aa13.94□□□□□ -0.18
RAB11FIP3-210ENST00000487899 IREB2P48200 963 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP3-210ENST00000487899 RASGRF1Q13972 1273 aa13.94□□□□□ -0.18
RAB11FIP3-210ENST00000487899 NOM1Q5C9Z4 860 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP3-210ENST00000487899 DDX60LQ5H9U9 1706 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP3-210ENST00000487899 FKBP1CQ5VVH2 108 aa13.94□□□□□ -0.18
RAB11FIP3-210ENST00000487899 CCDC102BQ68D86 513 aa13.94□□□□□ -0.18
RAB11FIP3-210ENST00000487899 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.94□□□□□ -0.18
RAB11FIP3-210ENST00000487899 ANKRD13AQ8IZ07 590 aa13.94□□□□□ -0.18
RAB11FIP3-210ENST00000487899 MRIQ9BWK5 157 aa13.94□□□□□ -0.18
RAB11FIP3-210ENST00000487899 LOC285556D6RIA3 1793 aa13.94□□□□□ -0.18
RAB11FIP3-210ENST00000487899 A0A1B0GUL7 405 aa13.93□□□□□ -0.18
RAB11FIP3-210ENST00000487899 MANSC4A6NHS7 340 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms