RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 POLR2AP24928 1970 aaKnown RBP16.19■□□□□ 0.18
COL4A6-207ENST00000487645 PDE4AP27815 886 aa16.19■□□□□ 0.18
COL4A6-207ENST00000487645 GRIK5Q16478 980 aa16.19■□□□□ 0.18
COL4A6-207ENST00000487645 ZNF526Q8TF50 670 aaPredicted RBP16.19■□□□□ 0.18
COL4A6-207ENST00000487645 GPBP1L1Q9HC44 474 aaPredicted RBP16.19■□□□□ 0.18
COL4A6-207ENST00000487645 PAG1Q9NWQ8 432 aa16.19■□□□□ 0.18
COL4A6-207ENST00000487645 LRP2BPQ9P2M1 347 aa16.19■□□□□ 0.18
COL4A6-207ENST00000487645 SERPINA10Q9UK55 444 aa16.19■□□□□ 0.18
COL4A6-207ENST00000487645 F8W031 263 aaPredicted RBP16.18■□□□□ 0.18
COL4A6-207ENST00000487645 PRDX5P30044 214 aa16.18■□□□□ 0.18
COL4A6-207ENST00000487645 EPHX2P34913 555 aa16.18■□□□□ 0.18
COL4A6-207ENST00000487645 TSHZ3Q63HK5 1081 aa16.18■□□□□ 0.18
COL4A6-207ENST00000487645 USP50Q70EL3 339 aaPredicted RBP16.18■□□□□ 0.18
COL4A6-207ENST00000487645 PNMA8AQ86V59 439 aaPredicted RBP16.18■□□□□ 0.18
COL4A6-207ENST00000487645 SLF2Q8IX21 1173 aa16.18■□□□□ 0.18
COL4A6-207ENST00000487645 MTMR14Q8NCE2 650 aa16.18■□□□□ 0.18
COL4A6-207ENST00000487645 FAM163AQ96GL9 167 aaPredicted RBP16.18■□□□□ 0.18
COL4A6-207ENST00000487645 DNAJC2Q99543 621 aaKnown RBP16.18■□□□□ 0.18
COL4A6-207ENST00000487645 TAF1DQ9H5J8 278 aaPredicted RBP16.18■□□□□ 0.18
COL4A6-207ENST00000487645 MYOZ2Q9NPC6 264 aa16.18■□□□□ 0.18
COL4A6-207ENST00000487645 PIH1D3Q9NQM4 214 aaKnown RBP16.18■□□□□ 0.18
COL4A6-207ENST00000487645 NDUFB9Q9Y6M9 179 aa16.18■□□□□ 0.18
COL4A6-207ENST00000487645 AK9Q5TCS8 1911 aa16.17■□□□□ 0.18
COL4A6-207ENST00000487645 ECM29Q5VYK3 1845 aa16.17■□□□□ 0.18
COL4A6-207ENST00000487645 GOLIM4O00461 696 aa16.17■□□□□ 0.18
COL4A6-207ENST00000487645 GSTO1P78417 241 aa16.17■□□□□ 0.18
COL4A6-207ENST00000487645 MAP3K12Q12852 859 aa16.17■□□□□ 0.18
COL4A6-207ENST00000487645 HHIPL2Q6UWX4 724 aa16.17■□□□□ 0.18
COL4A6-207ENST00000487645 DZIP1Q86YF9 867 aaKnown RBP16.17■□□□□ 0.18
COL4A6-207ENST00000487645 ANTXR1Q9H6X2 564 aa16.17■□□□□ 0.18
COL4A6-207ENST00000487645 NMRK2Q9NPI5 230 aa16.17■□□□□ 0.18
COL4A6-207ENST00000487645 RAI14Q9P0K7 980 aa16.17■□□□□ 0.18
COL4A6-207ENST00000487645 SHTN1A0MZ66 631 aa16.16■□□□□ 0.18
COL4A6-207ENST00000487645 LDHCP07864 332 aa16.16■□□□□ 0.18
COL4A6-207ENST00000487645 MECOMQ03112 1051 aa16.16■□□□□ 0.18
COL4A6-207ENST00000487645 DLGAP5Q15398 846 aa16.16■□□□□ 0.18
COL4A6-207ENST00000487645 TICAM2Q86XR7 235 aa16.16■□□□□ 0.18
COL4A6-207ENST00000487645 ZNF784Q8NCA9 323 aaPredicted RBP16.16■□□□□ 0.18
COL4A6-207ENST00000487645 TEKT1Q969V4 418 aa16.16■□□□□ 0.18
COL4A6-207ENST00000487645 NSUN4Q96CB9 384 aaKnown RBP16.16■□□□□ 0.18
COL4A6-207ENST00000487645 ZDHHC15Q96MV8 337 aa16.16■□□□□ 0.18
COL4A6-207ENST00000487645 CRKP46108 304 aa16.15■□□□□ 0.18
COL4A6-207ENST00000487645 SAMD7Q7Z3H4 446 aa16.15■□□□□ 0.18
COL4A6-207ENST00000487645 EDC3Q96F86 508 aaKnown RBP16.15■□□□□ 0.18
COL4A6-207ENST00000487645 ZBED3Q96IU2 234 aaPredicted RBP16.15■□□□□ 0.18
COL4A6-207ENST00000487645 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL4A6-207ENST00000487645 MAST2Q6P0Q8 1798 aa16.14■□□□□ 0.17
COL4A6-207ENST00000487645 IDH1O75874 414 aaKnown RBP16.14■□□□□ 0.17
COL4A6-207ENST00000487645 HIRAP54198 1017 aaPredicted RBP16.14■□□□□ 0.17
COL4A6-207ENST00000487645 KIF4BQ2VIQ3 1234 aa16.14■□□□□ 0.17
COL4A6-207ENST00000487645 CFAP100Q494V2 611 aa16.14■□□□□ 0.17
COL4A6-207ENST00000487645 TBC1D10BQ4KMP7 808 aaPredicted RBP16.14■□□□□ 0.17
COL4A6-207ENST00000487645 RBM26Q5T8P6 1007 aaKnown RBP16.14■□□□□ 0.17
COL4A6-207ENST00000487645 NAA16Q6N069 864 aaPredicted RBP16.14■□□□□ 0.17
COL4A6-207ENST00000487645 ZSCAN25Q6NSZ9 544 aa16.14■□□□□ 0.17
COL4A6-207ENST00000487645 KBTBD3Q8NAB2 608 aa16.14■□□□□ 0.17
COL4A6-207ENST00000487645 ZC3H15Q8WU90 426 aaKnown RBP16.14■□□□□ 0.17
COL4A6-207ENST00000487645 EVI5LQ96CN4 794 aa16.14■□□□□ 0.17
COL4A6-207ENST00000487645 WNT10BO00744 389 aa16.13■□□□□ 0.17
COL4A6-207ENST00000487645 EGFRP00533 1210 aa16.13■□□□□ 0.17
COL4A6-207ENST00000487645 RBM5P52756 815 aaKnown RBP eCLIP16.13■□□□□ 0.17
COL4A6-207ENST00000487645 LRRFIP1Q32MZ4 808 aaKnown RBP16.13■□□□□ 0.17
COL4A6-207ENST00000487645 SLC9C2Q5TAH2 1124 aa16.13■□□□□ 0.17
COL4A6-207ENST00000487645 TRPM4Q8TD43 1214 aa16.13■□□□□ 0.17
COL4A6-207ENST00000487645 ZNF384Q8TF68 577 aa16.13■□□□□ 0.17
COL4A6-207ENST00000487645 PRMT6Q96LA8 375 aaPredicted RBP16.13■□□□□ 0.17
COL4A6-207ENST00000487645 PGAP2Q9UHJ9 254 aa16.13■□□□□ 0.17
COL4A6-207ENST00000487645 GAKO14976 1311 aa16.13■□□□□ 0.17
COL4A6-207ENST00000487645 SPDYE2BA6NHP3 402 aa16.12■□□□□ 0.17
COL4A6-207ENST00000487645 KIF3CO14782 793 aa16.12■□□□□ 0.17
COL4A6-207ENST00000487645 MYO1BO43795 1136 aa16.12■□□□□ 0.17
COL4A6-207ENST00000487645 MAP4K4O95819 1239 aaPredicted RBP16.12■□□□□ 0.17
COL4A6-207ENST00000487645 SPDYE6P0CI01 402 aa16.12■□□□□ 0.17
COL4A6-207ENST00000487645 DIXDC1Q155Q3 683 aa16.12■□□□□ 0.17
COL4A6-207ENST00000487645 TTC22Q5TAA0 569 aa16.12■□□□□ 0.17
COL4A6-207ENST00000487645 DAGLAQ9Y4D2 1042 aa16.12■□□□□ 0.17
COL4A6-207ENST00000487645 GTF3C3Q9Y5Q9 886 aa16.12■□□□□ 0.17
COL4A6-207ENST00000487645 ADAMTSL1Q8N6G6 1762 aa16.11■□□□□ 0.17
COL4A6-207ENST00000487645 GPR75-ASB3A0A0A6YYF3 556 aa16.11■□□□□ 0.17
COL4A6-207ENST00000487645 TRIM6-TRIM34B2RNG4 842 aa16.11■□□□□ 0.17
COL4A6-207ENST00000487645 ZFYP08048 801 aaPredicted RBP16.11■□□□□ 0.17
COL4A6-207ENST00000487645 CYP7A1P22680 504 aa16.11■□□□□ 0.17
COL4A6-207ENST00000487645 UBE3CQ15386 1083 aa16.11■□□□□ 0.17
COL4A6-207ENST00000487645 NBPF9Q3BBW0 867 aa16.11■□□□□ 0.17
COL4A6-207ENST00000487645 EAPPQ56P03 285 aaPredicted RBP16.11■□□□□ 0.17
COL4A6-207ENST00000487645 APOBEC3HQ6NTF7 200 aaKnown RBP16.11■□□□□ 0.17
COL4A6-207ENST00000487645 LDHDQ86WU2 507 aa16.11■□□□□ 0.17
COL4A6-207ENST00000487645 CNTROBQ8N137 903 aa16.11■□□□□ 0.17
COL4A6-207ENST00000487645 MAGEB6Q8N7X4 407 aa16.11■□□□□ 0.17
COL4A6-207ENST00000487645 MROH7-TTC4A0A0A0MT08 1334 aa16.11■□□□□ 0.17
COL4A6-207ENST00000487645 TCRBV5S4A2TA0A5A2 114 aa16.1■□□□□ 0.17
COL4A6-207ENST00000487645 BAG3O95817 575 aa16.1■□□□□ 0.17
COL4A6-207ENST00000487645 PDE6AP16499 860 aa16.1■□□□□ 0.17
COL4A6-207ENST00000487645 ADD2P35612 726 aa16.1■□□□□ 0.17
COL4A6-207ENST00000487645 PPP4CP60510 307 aa16.1■□□□□ 0.17
COL4A6-207ENST00000487645 CERS3Q8IU89 383 aa16.1■□□□□ 0.17
COL4A6-207ENST00000487645 NOL10Q9BSC4 688 aaKnown RBP16.1■□□□□ 0.17
COL4A6-207ENST00000487645 PCDHAC2Q9Y5I4 1007 aa16.1■□□□□ 0.17
COL4A6-207ENST00000487645 RNF113AO15541 343 aaKnown RBP16.09■□□□□ 0.17
COL4A6-207ENST00000487645 RILPL2Q969X0 211 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms