RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 CYP2C8P10632 490 aa7.72□□□□□ -1.17
COL4A3-206ENST00000487633 EIF4G2P78344 907 aaKnown RBP eCLIP7.72□□□□□ -1.17
COL4A3-206ENST00000487633 KIF22Q14807 665 aa7.72□□□□□ -1.17
COL4A3-206ENST00000487633 GRIK5Q16478 980 aa7.72□□□□□ -1.17
COL4A3-206ENST00000487633 MTMR14Q8NCE2 650 aa7.72□□□□□ -1.17
COL4A3-206ENST00000487633 PLBD2Q8NHP8 589 aa7.72□□□□□ -1.17
COL4A3-206ENST00000487633 TSPYL4Q9UJ04 414 aa7.72□□□□□ -1.17
COL4A3-206ENST00000487633 FRMPD3Q5JV73 1810 aa7.71□□□□□ -1.17
COL4A3-206ENST00000487633 SPDYE5A6NIY4 337 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 UNCXA6NJT0 531 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 TCP10L2B9ZVM9 353 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 ADCY3O60266 1144 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 BCRP11274 1271 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 FLT3LGP49771 235 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 CACNB3P54284 484 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 PRMT2P55345 433 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 MAP3K9P80192 1104 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 MAP3K12Q12852 859 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 ARHGEF6Q15052 776 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 SUPT20HL1Q3ZLR7 823 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.71□□□□□ -1.18
COL4A3-206ENST00000487633 PNISRQ8TF01 805 aaKnown RBP7.71□□□□□ -1.18
COL4A3-206ENST00000487633 COA1Q9GZY4 146 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 SEMA6BQ9H3T3 888 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 GREM2Q9H772 168 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 TDRD3Q9H7E2 651 aaKnown RBP7.71□□□□□ -1.18
COL4A3-206ENST00000487633 CD209Q9NNX6 404 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 ZNF70Q9UC06 446 aaPredicted RBP7.71□□□□□ -1.18
COL4A3-206ENST00000487633 PPP2R3BQ9Y5P8 575 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 MYO3BQ8WXR4 1341 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 MAST2Q6P0Q8 1798 aa7.71□□□□□ -1.18
COL4A3-206ENST00000487633 GNRH1P01148 92 aa7.7□□□□□ -1.18
COL4A3-206ENST00000487633 UBXN2AP68543 259 aa7.7□□□□□ -1.18
COL4A3-206ENST00000487633 FAM109BQ6ICB4 259 aaPredicted RBP7.7□□□□□ -1.18
COL4A3-206ENST00000487633 ANKRD18AQ8IVF6 992 aa7.7□□□□□ -1.18
COL4A3-206ENST00000487633 ZBTB38Q8NAP3 1195 aaPredicted RBP7.7□□□□□ -1.18
COL4A3-206ENST00000487633 PHAXQ9H814 394 aaKnown RBP7.7□□□□□ -1.18
COL4A3-206ENST00000487633 XIRP2A4UGR9 3374 aa7.7□□□□□ -1.18
COL4A3-206ENST00000487633 PHIPQ8WWQ0 1821 aa7.69□□□□□ -1.18
COL4A3-206ENST00000487633 PDHXO00330 501 aa7.69□□□□□ -1.18
COL4A3-206ENST00000487633 PDE8AO60658 829 aa7.69□□□□□ -1.18
COL4A3-206ENST00000487633 SLURP2P0DP57 97 aa7.69□□□□□ -1.18
COL4A3-206ENST00000487633 PPP2R1AP30153 589 aa7.69□□□□□ -1.18
COL4A3-206ENST00000487633 INPP5BP32019 993 aa7.69□□□□□ -1.18
COL4A3-206ENST00000487633 LRRC26Q2I0M4 334 aa7.69□□□□□ -1.18
COL4A3-206ENST00000487633 SPDYE2Q495Y8 402 aa7.69□□□□□ -1.18
COL4A3-206ENST00000487633 C9orf50Q5SZB4 431 aa7.69□□□□□ -1.18
COL4A3-206ENST00000487633 GPAT2Q6NUI2 795 aa7.69□□□□□ -1.18
COL4A3-206ENST00000487633 NECAB2Q7Z6G3 386 aa7.69□□□□□ -1.18
COL4A3-206ENST00000487633 SLAIN1Q8ND83 568 aa7.69□□□□□ -1.18
COL4A3-206ENST00000487633 NECAB3Q96P71 396 aaPredicted RBP7.69□□□□□ -1.18
COL4A3-206ENST00000487633 MYD88Q99836 296 aa7.69□□□□□ -1.18
COL4A3-206ENST00000487633 TAF5LO75529 589 aa7.68□□□□□ -1.18
COL4A3-206ENST00000487633 CETPP11597 493 aa7.68□□□□□ -1.18
COL4A3-206ENST00000487633 TRIM28Q13263 835 aaKnown RBP7.68□□□□□ -1.18
COL4A3-206ENST00000487633 NFE2L2Q16236 605 aa7.68□□□□□ -1.18
COL4A3-206ENST00000487633 CCDC152Q4G0S7 254 aa7.68□□□□□ -1.18
COL4A3-206ENST00000487633 ZNF697Q5TEC3 545 aa7.68□□□□□ -1.18
COL4A3-206ENST00000487633 HELBQ8NG08 1087 aaPredicted RBP7.68□□□□□ -1.18
COL4A3-206ENST00000487633 TTLL11Q8NHH1 800 aa7.68□□□□□ -1.18
COL4A3-206ENST00000487633 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.68□□□□□ -1.18
COL4A3-206ENST00000487633 BSDC1Q9NW68 430 aaPredicted RBP7.68□□□□□ -1.18
COL4A3-206ENST00000487633 TAOK2Q9UL54 1235 aa7.68□□□□□ -1.18
COL4A3-206ENST00000487633 PCCAP05165 728 aaPredicted RBP7.67□□□□□ -1.18
COL4A3-206ENST00000487633 RBM5P52756 815 aaKnown RBP eCLIP7.67□□□□□ -1.18
COL4A3-206ENST00000487633 PPIL2Q13356 520 aa7.67□□□□□ -1.18
COL4A3-206ENST00000487633 SNAPC2Q13487 334 aa7.67□□□□□ -1.18
COL4A3-206ENST00000487633 SHHQ15465 462 aa7.67□□□□□ -1.18
COL4A3-206ENST00000487633 TJAP1Q5JTD0 557 aa7.67□□□□□ -1.18
COL4A3-206ENST00000487633 MIGA2Q7L4E1 593 aa7.67□□□□□ -1.18
COL4A3-206ENST00000487633 ANKRD23Q86SG2 305 aa7.67□□□□□ -1.18
COL4A3-206ENST00000487633 ERO1BQ86YB8 467 aa7.67□□□□□ -1.18
COL4A3-206ENST00000487633 WRNIP1Q96S55 665 aa7.67□□□□□ -1.18
COL4A3-206ENST00000487633 C11orf49Q9H6J7 331 aa7.67□□□□□ -1.18
COL4A3-206ENST00000487633 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.67□□□□□ -1.18
COL4A3-206ENST00000487633 NCOR1O75376 2440 aa7.67□□□□□ -1.18
COL4A3-206ENST00000487633 MYO9BQ13459 2157 aa7.66□□□□□ -1.18
COL4A3-206ENST00000487633 PEX10O60683 326 aa7.66□□□□□ -1.18
COL4A3-206ENST00000487633 COL6A1P12109 1028 aa7.66□□□□□ -1.18
COL4A3-206ENST00000487633 FOSL2P15408 326 aa7.66□□□□□ -1.18
COL4A3-206ENST00000487633 HOXD10P28358 340 aa7.66□□□□□ -1.18
COL4A3-206ENST00000487633 FCGRTP55899 365 aa7.66□□□□□ -1.18
COL4A3-206ENST00000487633 CTSWP56202 376 aa7.66□□□□□ -1.18
COL4A3-206ENST00000487633 SNX27Q96L92 541 aa7.66□□□□□ -1.18
COL4A3-206ENST00000487633 NBPF3Q9H094 633 aa7.66□□□□□ -1.18
COL4A3-206ENST00000487633 ZCCHC17Q9NP64 241 aaKnown RBP7.66□□□□□ -1.18
COL4A3-206ENST00000487633 CSADQ9Y600 493 aa7.66□□□□□ -1.18
COL4A3-206ENST00000487633 IGKV5-2P06315 115 aa7.65□□□□□ -1.18
COL4A3-206ENST00000487633 CHRNDQ07001 517 aa7.65□□□□□ -1.18
COL4A3-206ENST00000487633 RLFQ13129 1914 aa7.65□□□□□ -1.18
COL4A3-206ENST00000487633 GRIN2CQ14957 1233 aa7.65□□□□□ -1.18
COL4A3-206ENST00000487633 HDGFL1Q5TGJ6 251 aa7.65□□□□□ -1.18
COL4A3-206ENST00000487633 ALYREFQ86V81 257 aaKnown RBP7.65□□□□□ -1.18
COL4A3-206ENST00000487633 DZIP1LQ8IYY4 767 aaKnown RBP7.65□□□□□ -1.18
COL4A3-206ENST00000487633 PXYLP1Q8TE99 480 aa7.65□□□□□ -1.18
COL4A3-206ENST00000487633 NUDCQ9Y266 331 aa7.65□□□□□ -1.18
COL4A3-206ENST00000487633 LEMD3Q9Y2U8 911 aa7.65□□□□□ -1.18
COL4A3-206ENST00000487633 BDP1A6H8Y1 2624 aa7.65□□□□□ -1.19
COL4A3-206ENST00000487633 SYNGAP1Q96PV0 1343 aa7.64□□□□□ -1.19
COL4A3-206ENST00000487633 MYO1BO43795 1136 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms