RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 SGSM2O43147 1006 aa16.62■□□□□ 0.25
EPHB4-206ENST00000487222 ARFGAP2Q8N6H7 521 aa16.62■□□□□ 0.25
EPHB4-206ENST00000487222 IPO4Q8TEX9 1081 aaKnown RBP16.62■□□□□ 0.25
EPHB4-206ENST00000487222 SIRT1Q96EB6 747 aa16.62■□□□□ 0.25
EPHB4-206ENST00000487222 ZFP91Q96JP5 570 aaPredicted RBP16.62■□□□□ 0.25
EPHB4-206ENST00000487222 AKR1B15C9JRZ8 316 aaPredicted RBP16.62■□□□□ 0.25
EPHB4-206ENST00000487222 SLC27A2O14975 620 aa16.62■□□□□ 0.25
EPHB4-206ENST00000487222 VAV2P52735 878 aa16.62■□□□□ 0.25
EPHB4-206ENST00000487222 EDC4Q6P2E9 1401 aaKnown RBP16.62■□□□□ 0.25
EPHB4-206ENST00000487222 HOXB7P09629 217 aa16.62■□□□□ 0.25
EPHB4-206ENST00000487222 RRP36Q96EU6 259 aaKnown RBP16.62■□□□□ 0.25
EPHB4-206ENST00000487222 CLSTN2Q9H4D0 955 aa16.62■□□□□ 0.25
EPHB4-206ENST00000487222 EBAG9O00559 213 aa16.62■□□□□ 0.25
EPHB4-206ENST00000487222 ATP2C2O75185 946 aa16.62■□□□□ 0.25
EPHB4-206ENST00000487222 IRS4O14654 1257 aaPredicted RBP16.61■□□□□ 0.25
EPHB4-206ENST00000487222 MCM7P33993 719 aa16.61■□□□□ 0.25
EPHB4-206ENST00000487222 CHMP4BP1P59074 171 aa16.61■□□□□ 0.25
EPHB4-206ENST00000487222 ZNF622Q969S3 477 aaKnown RBP eCLIP16.61■□□□□ 0.255e-7■■■■■ 27
EPHB4-206ENST00000487222 EIF4G3O43432 1585 aaKnown RBP16.61■□□□□ 0.25
EPHB4-206ENST00000487222 IL13P35225 146 aa16.61■□□□□ 0.25
EPHB4-206ENST00000487222 CAPZA3Q96KX2 299 aa16.61■□□□□ 0.25
EPHB4-206ENST00000487222 RBM28Q9NW13 759 aaKnown RBP16.61■□□□□ 0.25
EPHB4-206ENST00000487222 ARID5AQ03989 594 aa16.61■□□□□ 0.25
EPHB4-206ENST00000487222 NBPF11Q86T75 865 aa16.61■□□□□ 0.25
EPHB4-206ENST00000487222 FBF1Q8TES7 1133 aa16.61■□□□□ 0.25
EPHB4-206ENST00000487222 VPS18Q9P253 973 aa16.61■□□□□ 0.25
EPHB4-206ENST00000487222 RHOXF2BP0C7M4 288 aa16.61■□□□□ 0.25
EPHB4-206ENST00000487222 RXRAP19793 462 aa16.61■□□□□ 0.25
EPHB4-206ENST00000487222 MIGA1Q8NAN2 632 aa16.61■□□□□ 0.25
EPHB4-206ENST00000487222 RHOXF2Q9BQY4 288 aa16.61■□□□□ 0.25
EPHB4-206ENST00000487222 MCM9Q9NXL9 1143 aa16.61■□□□□ 0.25
EPHB4-206ENST00000487222 CHL1O00533 1208 aa16.6■□□□□ 0.25
EPHB4-206ENST00000487222 CCDC129Q6ZRS4 1044 aa16.6■□□□□ 0.25
EPHB4-206ENST00000487222 TMEM87BQ96K49 555 aa16.6■□□□□ 0.25
EPHB4-206ENST00000487222 RRAGDQ9NQL2 400 aaPredicted RBP16.6■□□□□ 0.25
EPHB4-206ENST00000487222 PLCG2P16885 1265 aa16.6■□□□□ 0.25
EPHB4-206ENST00000487222 PPP1R2P41236 205 aa16.6■□□□□ 0.25
EPHB4-206ENST00000487222 ANO1Q5XXA6 986 aa16.6■□□□□ 0.25
EPHB4-206ENST00000487222 SMARCC2Q8TAQ2 1214 aa16.6■□□□□ 0.25
EPHB4-206ENST00000487222 TRIM35Q9UPQ4 493 aa16.6■□□□□ 0.25
EPHB4-206ENST00000487222 SBNO1A3KN83 1393 aa16.6■□□□□ 0.25
EPHB4-206ENST00000487222 MAST1Q9Y2H9 1570 aa16.6■□□□□ 0.25
EPHB4-206ENST00000487222 KIF4AO95239 1232 aa16.6■□□□□ 0.25
EPHB4-206ENST00000487222 EVCP57679 992 aa16.6■□□□□ 0.25
EPHB4-206ENST00000487222 HS2ST1Q7LGA3 356 aa16.59■□□□□ 0.25
EPHB4-206ENST00000487222 HDXQ7Z353 690 aa16.59■□□□□ 0.25
EPHB4-206ENST00000487222 ZNF804AQ7Z570 1209 aa16.59■□□□□ 0.25
EPHB4-206ENST00000487222 HELBQ8NG08 1087 aaPredicted RBP16.59■□□□□ 0.25
EPHB4-206ENST00000487222 PPP1R14CQ8TAE6 165 aa16.59■□□□□ 0.25
EPHB4-206ENST00000487222 PCDH11XQ9BZA7 1347 aa16.59■□□□□ 0.25
EPHB4-206ENST00000487222 PCDH11YQ9BZA8 1340 aa16.59■□□□□ 0.25
EPHB4-206ENST00000487222 EYA2O00167 538 aa16.59■□□□□ 0.25
EPHB4-206ENST00000487222 TNNI2P48788 182 aa16.59■□□□□ 0.25
EPHB4-206ENST00000487222 NYXQ9GZU5 481 aa16.59■□□□□ 0.25
EPHB4-206ENST00000487222 TNNI3KQ59H18 835 aa16.59■□□□□ 0.25
EPHB4-206ENST00000487222 CCDC122Q5T0U0 273 aa16.59■□□□□ 0.25
EPHB4-206ENST00000487222 ANKS4BQ8N8V4 417 aa16.59■□□□□ 0.25
EPHB4-206ENST00000487222 FPGT-TNNI3KV9GXZ4 949 aa16.59■□□□□ 0.25
EPHB4-206ENST00000487222 PPP2R3AQ06190 1150 aa16.58■□□□□ 0.25
EPHB4-206ENST00000487222 TPTE2Q6XPS3 522 aa16.58■□□□□ 0.25
EPHB4-206ENST00000487222 GPATCH11Q8N954 259 aa16.58■□□□□ 0.25
EPHB4-206ENST00000487222 TTC14Q96N46 770 aa16.58■□□□□ 0.25
EPHB4-206ENST00000487222 TNNC1P63316 161 aa16.58■□□□□ 0.24
EPHB4-206ENST00000487222 IQCGQ9H095 443 aaKnown RBP16.58■□□□□ 0.24
EPHB4-206ENST00000487222 ATP7AQ04656 1500 aa16.58■□□□□ 0.24
EPHB4-206ENST00000487222 ATP2A1O14983 1001 aa16.58■□□□□ 0.24
EPHB4-206ENST00000487222 PHACTR2O75167 634 aa16.58■□□□□ 0.24
EPHB4-206ENST00000487222 TSGA10Q9BZW7 698 aa16.58■□□□□ 0.24
EPHB4-206ENST00000487222 KCNH3Q9ULD8 1083 aa16.58■□□□□ 0.24
EPHB4-206ENST00000487222 MRVI1Q9Y6F6 885 aa16.58■□□□□ 0.24
EPHB4-206ENST00000487222 SPDYE3A6NKU9 549 aa16.58■□□□□ 0.24
EPHB4-206ENST00000487222 TUBB2AQ13885 445 aa16.58■□□□□ 0.24
EPHB4-206ENST00000487222 TRIM14Q14142 442 aa16.58■□□□□ 0.24
EPHB4-206ENST00000487222 TUBB2BQ9BVA1 445 aa16.58■□□□□ 0.24
EPHB4-206ENST00000487222 VWA3AA6NCI4 1184 aa16.57■□□□□ 0.24
EPHB4-206ENST00000487222 DEXIO95424 95 aa16.57■□□□□ 0.24
EPHB4-206ENST00000487222 ZNF75DP51815 510 aa16.57■□□□□ 0.24
EPHB4-206ENST00000487222 LMBRD1Q9NUN5 540 aa16.57■□□□□ 0.24
EPHB4-206ENST00000487222 A0A1B0GUL7 405 aa16.57■□□□□ 0.24
EPHB4-206ENST00000487222 UBAP1LF5GYI3 381 aa16.57■□□□□ 0.24
EPHB4-206ENST00000487222 MBD4O95243 580 aa16.57■□□□□ 0.24
EPHB4-206ENST00000487222 IGSF22Q8N9C0 903 aa16.57■□□□□ 0.24
EPHB4-206ENST00000487222 LEO1Q8WVC0 666 aaPredicted RBP16.57■□□□□ 0.24
EPHB4-206ENST00000487222 WDHD1O75717 1129 aaPredicted RBP16.57■□□□□ 0.24
EPHB4-206ENST00000487222 GRIPAP1Q4V328 841 aa16.57■□□□□ 0.24
EPHB4-206ENST00000487222 TSNARE1Q96NA8 513 aa16.57■□□□□ 0.24
EPHB4-206ENST00000487222 SYNCQ9H7C4 482 aa16.57■□□□□ 0.24
EPHB4-206ENST00000487222 CBX8Q9HC52 389 aa16.57■□□□□ 0.24
EPHB4-206ENST00000487222 TERF1P54274 439 aa16.57■□□□□ 0.24
EPHB4-206ENST00000487222 TIMM10P62072 90 aa16.57■□□□□ 0.24
EPHB4-206ENST00000487222 FAM173BQ6P4H8 233 aa16.57■□□□□ 0.24
EPHB4-206ENST00000487222 CCDC121Q6ZUS5 278 aa16.57■□□□□ 0.24
EPHB4-206ENST00000487222 PLCD1P51178 756 aa16.56■□□□□ 0.24
EPHB4-206ENST00000487222 ZNF790Q6PG37 636 aa16.56■□□□□ 0.24
EPHB4-206ENST00000487222 OTUD6BQ8N6M0 293 aa16.56■□□□□ 0.24
EPHB4-206ENST00000487222 CEP63Q96MT8 703 aa16.56■□□□□ 0.24
EPHB4-206ENST00000487222 DBNDD2Q9BQY9 259 aa16.56■□□□□ 0.24
EPHB4-206ENST00000487222 METTL22Q9BUU2 404 aaPredicted RBP16.56■□□□□ 0.24
EPHB4-206ENST00000487222 FAM13AO94988 1023 aa16.56■□□□□ 0.24
EPHB4-206ENST00000487222 PICALMQ13492 652 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms