RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 PPP1R15AO75807 674 aaPredicted RBP7.39□□□□□ -1.23
SNRNP40-205ENST00000486941 EDN3P14138 238 aa7.39□□□□□ -1.23
SNRNP40-205ENST00000486941 TAL1P17542 331 aaPredicted RBP7.39□□□□□ -1.23
SNRNP40-205ENST00000486941 ADMP35318 185 aa7.39□□□□□ -1.23
SNRNP40-205ENST00000486941 GRIA4P48058 902 aa7.39□□□□□ -1.23
SNRNP40-205ENST00000486941 AAMPQ13685 434 aa7.39□□□□□ -1.23
SNRNP40-205ENST00000486941 C12orf50Q8NA57 414 aaPredicted RBP7.39□□□□□ -1.23
SNRNP40-205ENST00000486941 C2CD4AQ8NCU7 369 aaPredicted RBP7.39□□□□□ -1.23
SNRNP40-205ENST00000486941 SOX17Q9H6I2 414 aaPredicted RBP7.39□□□□□ -1.23
SNRNP40-205ENST00000486941 HIF3AQ9Y2N7 669 aa7.39□□□□□ -1.23
SNRNP40-205ENST00000486941 GTF3C3Q9Y5Q9 886 aa7.39□□□□□ -1.23
SNRNP40-205ENST00000486941 FAM177BA6PVY3 158 aa7.38□□□□□ -1.23
SNRNP40-205ENST00000486941 ECEL1O95672 775 aa7.38□□□□□ -1.23
SNRNP40-205ENST00000486941 ABL1P00519 1130 aa7.38□□□□□ -1.23
SNRNP40-205ENST00000486941 ARL4DP49703 201 aa7.38□□□□□ -1.23
SNRNP40-205ENST00000486941 NUTM2GQ5VZR2 741 aa7.38□□□□□ -1.23
SNRNP40-205ENST00000486941 INTS5Q6P9B9 1019 aaKnown RBP7.38□□□□□ -1.23
SNRNP40-205ENST00000486941 AMOTL2Q9Y2J4 779 aa7.38□□□□□ -1.23
SNRNP40-205ENST00000486941 GSTM4Q03013 218 aa7.37□□□□□ -1.23
SNRNP40-205ENST00000486941 SF3B2Q13435 895 aaKnown RBP7.37□□□□□ -1.23
SNRNP40-205ENST00000486941 EXOSC6Q5RKV6 272 aaKnown RBP7.37□□□□□ -1.23
SNRNP40-205ENST00000486941 CCNJLQ8IV13 435 aa7.37□□□□□ -1.23
SNRNP40-205ENST00000486941 TTC16Q8NEE8 873 aa7.37□□□□□ -1.23
SNRNP40-205ENST00000486941 FBLIM1Q8WUP2 373 aa7.37□□□□□ -1.23
SNRNP40-205ENST00000486941 GATA6Q92908 595 aa7.37□□□□□ -1.23
SNRNP40-205ENST00000486941 FMNL2Q96PY5 1086 aa7.37□□□□□ -1.23
SNRNP40-205ENST00000486941 GOLGA2P5Q9HBQ8 144 aa7.37□□□□□ -1.23
SNRNP40-205ENST00000486941 TOP2AP11388 1531 aaKnown RBP7.37□□□□□ -1.23
SNRNP40-205ENST00000486941 A0A096LPE4 126 aa7.36□□□□□ -1.23
SNRNP40-205ENST00000486941 A0A1W2PPZ6 126 aa7.36□□□□□ -1.23
SNRNP40-205ENST00000486941 USP5P45974 858 aa7.36□□□□□ -1.23
SNRNP40-205ENST00000486941 EHHADHQ08426 723 aa7.36□□□□□ -1.23
SNRNP40-205ENST00000486941 COL19A1Q14993 1142 aa7.36□□□□□ -1.23
SNRNP40-205ENST00000486941 MSMPQ1L6U9 139 aa7.36□□□□□ -1.23
SNRNP40-205ENST00000486941 GALNT12Q8IXK2 581 aa7.36□□□□□ -1.23
SNRNP40-205ENST00000486941 FBXL6Q8N531 539 aa7.36□□□□□ -1.23
SNRNP40-205ENST00000486941 ICMTO60725 284 aa7.35□□□□□ -1.23
SNRNP40-205ENST00000486941 SERPINB4P48594 390 aa7.35□□□□□ -1.23
SNRNP40-205ENST00000486941 IRAK1P51617 712 aa7.35□□□□□ -1.23
SNRNP40-205ENST00000486941 SOX4Q06945 474 aaPredicted RBP7.35□□□□□ -1.23
SNRNP40-205ENST00000486941 TRIM56Q9BRZ2 755 aaKnown RBP7.35□□□□□ -1.23
SNRNP40-205ENST00000486941 PIM2Q9P1W9 311 aa7.35□□□□□ -1.23
SNRNP40-205ENST00000486941 ADGRE2Q9UHX3 823 aa7.35□□□□□ -1.23
SNRNP40-205ENST00000486941 URB2Q14146 1524 aaKnown RBP7.34□□□□□ -1.23
SNRNP40-205ENST00000486941 GAS2O43903 313 aaKnown RBP7.34□□□□□ -1.23
SNRNP40-205ENST00000486941 WNT11O96014 354 aa7.34□□□□□ -1.23
SNRNP40-205ENST00000486941 IGHA2P01877 340 aa7.34□□□□□ -1.23
SNRNP40-205ENST00000486941 ARHGAP4P98171 946 aa7.34□□□□□ -1.23
SNRNP40-205ENST00000486941 PCDH1Q08174 1060 aa7.34□□□□□ -1.23
SNRNP40-205ENST00000486941 EZH1Q92800 747 aaPredicted RBP7.34□□□□□ -1.23
SNRNP40-205ENST00000486941 CYP4F12Q9HCS2 524 aa7.34□□□□□ -1.23
SNRNP40-205ENST00000486941 PRDM2Q13029 1718 aa7.34□□□□□ -1.23
SNRNP40-205ENST00000486941 FAM95CA0A1B0GW59 222 aa7.33□□□□□ -1.24
SNRNP40-205ENST00000486941 MAOBP27338 520 aa7.33□□□□□ -1.24
SNRNP40-205ENST00000486941 GRIK1P39086 918 aa7.33□□□□□ -1.24
SNRNP40-205ENST00000486941 ORC1Q13415 861 aa7.33□□□□□ -1.24
SNRNP40-205ENST00000486941 NFKBIBQ15653 356 aa7.33□□□□□ -1.24
SNRNP40-205ENST00000486941 PRKAG2Q9UGJ0 569 aa7.33□□□□□ -1.24
SNRNP40-205ENST00000486941 ACTL7BQ9Y614 415 aa7.33□□□□□ -1.24
SNRNP40-205ENST00000486941 FAM170BA6NMN3 283 aa7.32□□□□□ -1.24
SNRNP40-205ENST00000486941 ADH5P11766 374 aa7.32□□□□□ -1.24
SNRNP40-205ENST00000486941 RXRBP28702 533 aa7.32□□□□□ -1.24
SNRNP40-205ENST00000486941 ABI1Q8IZP0 508 aa7.32□□□□□ -1.24
SNRNP40-205ENST00000486941 CLEC4MQ9H2X3 399 aaPredicted RBP7.32□□□□□ -1.24
SNRNP40-205ENST00000486941 LIN7BQ9HAP6 207 aa7.32□□□□□ -1.24
SNRNP40-205ENST00000486941 FOSL1P15407 271 aa7.31□□□□□ -1.24
SNRNP40-205ENST00000486941 KIAA0319Q5VV43 1072 aa7.31□□□□□ -1.24
SNRNP40-205ENST00000486941 FAM105AQ9NUU6 356 aa7.31□□□□□ -1.24
SNRNP40-205ENST00000486941 DYNC1LI2O43237 492 aaPredicted RBP7.3□□□□□ -1.24
SNRNP40-205ENST00000486941 NFICP08651 508 aa7.3□□□□□ -1.24
SNRNP40-205ENST00000486941 SEZ6L2Q6UXD5 910 aa7.3□□□□□ -1.24
SNRNP40-205ENST00000486941 ZAR1Q86SH2 424 aa7.3□□□□□ -1.24
SNRNP40-205ENST00000486941 CCDC39Q9UFE4 941 aa7.3□□□□□ -1.24
SNRNP40-205ENST00000486941 EGFL7Q9UHF1 273 aa7.3□□□□□ -1.24
SNRNP40-205ENST00000486941 LEMD3Q9Y2U8 911 aa7.3□□□□□ -1.24
SNRNP40-205ENST00000486941 CCDC88BA6NC98 1476 aa7.3□□□□□ -1.24
SNRNP40-205ENST00000486941 B3GALT4O96024 378 aa7.29□□□□□ -1.24
SNRNP40-205ENST00000486941 USP11P51784 963 aa7.29□□□□□ -1.24
SNRNP40-205ENST00000486941 FAM129BQ96TA1 746 aa7.29□□□□□ -1.24
SNRNP40-205ENST00000486941 SEMA6CQ9H3T2 930 aa7.29□□□□□ -1.24
SNRNP40-205ENST00000486941 GSX1Q9H4S2 264 aaPredicted RBP7.29□□□□□ -1.24
SNRNP40-205ENST00000486941 ZNF576Q9H609 170 aa7.29□□□□□ -1.24
SNRNP40-205ENST00000486941 ATG3Q9NT62 314 aa7.29□□□□□ -1.24
SNRNP40-205ENST00000486941 H3BRB1 525 aa7.28□□□□□ -1.24
SNRNP40-205ENST00000486941 PAX4O43316 350 aa7.28□□□□□ -1.24
SNRNP40-205ENST00000486941 PRNPP04156 253 aa7.28□□□□□ -1.24
SNRNP40-205ENST00000486941 ITPKAP23677 461 aa7.28□□□□□ -1.24
SNRNP40-205ENST00000486941 POU4F3Q15319 338 aa7.28□□□□□ -1.24
SNRNP40-205ENST00000486941 PAOXQ6QHF9 649 aa7.28□□□□□ -1.24
SNRNP40-205ENST00000486941 WDR89Q96FK6 387 aaPredicted RBP7.28□□□□□ -1.24
SNRNP40-205ENST00000486941 OSBPL1AQ9BXW6 950 aa7.28□□□□□ -1.24
SNRNP40-205ENST00000486941 TUT1Q9H6E5 874 aaKnown RBP7.28□□□□□ -1.24
SNRNP40-205ENST00000486941 ACSS3Q9H6R3 686 aa7.28□□□□□ -1.24
SNRNP40-205ENST00000486941 NPHS2Q9NP85 383 aa7.28□□□□□ -1.24
SNRNP40-205ENST00000486941 C1GALT1Q9NS00 363 aa7.28□□□□□ -1.24
SNRNP40-205ENST00000486941 IFT140Q96RY7 1462 aa7.28□□□□□ -1.24
SNRNP40-205ENST00000486941 GPR182O15218 404 aa7.27□□□□□ -1.25
SNRNP40-205ENST00000486941 FAAP100Q0VG06 881 aa7.27□□□□□ -1.25
SNRNP40-205ENST00000486941 CBLL1Q75N03 491 aa7.27□□□□□ -1.25
SNRNP40-205ENST00000486941 WFDC3Q8IUB2 231 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms