RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 TEPSINQ96N21 525 aa25.31■■□□□ 1.64
PHF1-208ENST00000486845 SPINK5Q9NQ38 1064 aaPredicted RBP25.31■■□□□ 1.64
PHF1-208ENST00000486845 MROH5Q6ZUA9 1318 aa25.31■■□□□ 1.64
PHF1-208ENST00000486845 TCP10L2B9ZVM9 353 aa25.3■■□□□ 1.64
PHF1-208ENST00000486845 CRKP46108 304 aa25.3■■□□□ 1.64
PHF1-208ENST00000486845 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.3■■□□□ 1.64
PHF1-208ENST00000486845 SUCLG2Q96I99 432 aa25.3■■□□□ 1.64
PHF1-208ENST00000486845 MS4A4AQ96JQ5 239 aa25.3■■□□□ 1.64
PHF1-208ENST00000486845 PUS3Q9BZE2 481 aaKnown RBP25.3■■□□□ 1.64
PHF1-208ENST00000486845 MAP3K9P80192 1104 aa25.29■■□□□ 1.64
PHF1-208ENST00000486845 VPS37DQ86XT2 251 aa25.29■■□□□ 1.64
PHF1-208ENST00000486845 TMEM39BQ9GZU3 492 aa25.29■■□□□ 1.64
PHF1-208ENST00000486845 RIPOR2Q9Y4F9 1068 aa25.29■■□□□ 1.64
PHF1-208ENST00000486845 CSADQ9Y600 493 aa25.29■■□□□ 1.64
PHF1-208ENST00000486845 KIAA0100Q14667 2235 aaKnown RBP25.29■■□□□ 1.64
PHF1-208ENST00000486845 GTF2A2P52657 109 aa25.28■■□□□ 1.64
PHF1-208ENST00000486845 VGLL4Q14135 290 aa25.28■■□□□ 1.64
PHF1-208ENST00000486845 ARHGEF6Q15052 776 aa25.28■■□□□ 1.64
PHF1-208ENST00000486845 CDAN1Q8IWY9 1227 aa25.28■■□□□ 1.64
PHF1-208ENST00000486845 TBC1D22AQ8WUA7 517 aa25.28■■□□□ 1.64
PHF1-208ENST00000486845 BRI3BPQ8WY22 251 aa25.28■■□□□ 1.64
PHF1-208ENST00000486845 CCL15-CCL14A0A0B4J2E2 113 aa25.27■■□□□ 1.64
PHF1-208ENST00000486845 HDLBPQ00341 1268 aaKnown RBP25.27■■□□□ 1.64
PHF1-208ENST00000486845 TAF1CQ15572 869 aaPredicted RBP25.27■■□□□ 1.64
PHF1-208ENST00000486845 CCL15Q16663 113 aa25.27■■□□□ 1.64
PHF1-208ENST00000486845 FBXO33Q7Z6M2 555 aa25.27■■□□□ 1.64
PHF1-208ENST00000486845 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.27■■□□□ 1.641e-7■■■□□ 17.9
PHF1-208ENST00000486845 KAZALD1Q96I82 304 aa25.27■■□□□ 1.64
PHF1-208ENST00000486845 ZFYVE28Q9HCC9 887 aa25.27■■□□□ 1.64
PHF1-208ENST00000486845 CNKSR2Q8WXI2 1034 aa25.26■■□□□ 1.63
PHF1-208ENST00000486845 UTYO14607 1347 aa25.26■■□□□ 1.63
PHF1-208ENST00000486845 ANP32CO43423 234 aa25.25■■□□□ 1.63
PHF1-208ENST00000486845 FRAT2O75474 233 aaPredicted RBP25.25■■□□□ 1.63
PHF1-208ENST00000486845 NBPF7P0C2Y1 421 aaPredicted RBP25.25■■□□□ 1.63
PHF1-208ENST00000486845 CHAF1AQ13111 956 aaPredicted RBP25.25■■□□□ 1.63
PHF1-208ENST00000486845 CAVIN4Q5BKX8 364 aa25.25■■□□□ 1.63
PHF1-208ENST00000486845 IQSEC3Q9UPP2 1182 aaPredicted RBP25.25■■□□□ 1.63
PHF1-208ENST00000486845 WDHD1O75717 1129 aaPredicted RBP25.24■■□□□ 1.63
PHF1-208ENST00000486845 GRIK5Q16478 980 aa25.24■■□□□ 1.63
PHF1-208ENST00000486845 RABL6Q3YEC7 729 aaPredicted RBP25.24■■□□□ 1.63
PHF1-208ENST00000486845 METTL24Q5JXM2 366 aa25.24■■□□□ 1.63
PHF1-208ENST00000486845 TEKT1Q969V4 418 aa25.24■■□□□ 1.63
PHF1-208ENST00000486845 OTUD5Q96G74 571 aa25.24■■□□□ 1.63
PHF1-208ENST00000486845 BICC1Q9H694 974 aaKnown RBP25.24■■□□□ 1.63
PHF1-208ENST00000486845 CAP1Q01518 475 aa25.23■■□□□ 1.63
PHF1-208ENST00000486845 TMEM106CQ9BVX2 250 aa25.23■■□□□ 1.63
PHF1-208ENST00000486845 TMOD2Q9NZR1 351 aa25.23■■□□□ 1.63
PHF1-208ENST00000486845 CENPFP49454 3210 aa25.22■■□□□ 1.63
PHF1-208ENST00000486845 SPDYE5A6NIY4 337 aa25.22■■□□□ 1.63
PHF1-208ENST00000486845 HOOK2Q96ED9 719 aa25.22■■□□□ 1.63
PHF1-208ENST00000486845 MKI67P46013 3256 aaKnown RBP25.21■■□□□ 1.63
PHF1-208ENST00000486845 PDE8BO95263 885 aa25.21■■□□□ 1.63
PHF1-208ENST00000486845 EN2P19622 333 aaPredicted RBP25.21■■□□□ 1.63
PHF1-208ENST00000486845 SLC9C1Q4G0N8 1177 aa25.21■■□□□ 1.63
PHF1-208ENST00000486845 LRRC24Q50LG9 513 aa25.21■■□□□ 1.63
PHF1-208ENST00000486845 NBPF11Q86T75 865 aa25.21■■□□□ 1.63
PHF1-208ENST00000486845 FAM43AQ8N2R8 423 aa25.21■■□□□ 1.63
PHF1-208ENST00000486845 ZNF333Q96JL9 665 aa25.21■■□□□ 1.63
PHF1-208ENST00000486845 ZDHHC15Q96MV8 337 aa25.21■■□□□ 1.63
PHF1-208ENST00000486845 MRIQ9BWK5 157 aa25.21■■□□□ 1.63
PHF1-208ENST00000486845 MAST3O60307 1309 aa25.2■■□□□ 1.62
PHF1-208ENST00000486845 CETPP11597 493 aa25.2■■□□□ 1.62
PHF1-208ENST00000486845 CACNB3P54284 484 aa25.2■■□□□ 1.62
PHF1-208ENST00000486845 FKBP1CQ5VVH2 108 aa25.2■■□□□ 1.62
PHF1-208ENST00000486845 FAM83AQ86UY5 434 aa25.2■■□□□ 1.62
PHF1-208ENST00000486845 ERO1BQ86YB8 467 aa25.2■■□□□ 1.62
PHF1-208ENST00000486845 ANKRD44Q8N8A2 993 aa25.2■■□□□ 1.62
PHF1-208ENST00000486845 VGLL2Q8N8G2 317 aa25.2■■□□□ 1.62
PHF1-208ENST00000486845 ZCCHC17Q9NP64 241 aaKnown RBP25.2■■□□□ 1.62
PHF1-208ENST00000486845 SUGT1Q9Y2Z0 365 aa25.2■■□□□ 1.62
PHF1-208ENST00000486845 PTCH2Q9Y6C5 1203 aa25.2■■□□□ 1.62
PHF1-208ENST00000486845 SNCAIPQ9Y6H5 919 aa25.2■■□□□ 1.62
PHF1-208ENST00000486845 HABP4Q5JVS0 413 aaKnown RBP25.19■■□□□ 1.62
PHF1-208ENST00000486845 WRNIP1Q96S55 665 aa25.19■■□□□ 1.62
PHF1-208ENST00000486845 KIF16BQ96L93 1317 aa25.18■■□□□ 1.62
PHF1-208ENST00000486845 TLR2O60603 784 aa25.17■■□□□ 1.62
PHF1-208ENST00000486845 BCAMP50895 628 aa25.17■■□□□ 1.62
PHF1-208ENST00000486845 SNAPC2Q13487 334 aa25.17■■□□□ 1.62
PHF1-208ENST00000486845 RPAP1Q9BWH6 1393 aaPredicted RBP25.17■■□□□ 1.62
PHF1-208ENST00000486845 IFIT1P09914 478 aaKnown RBP25.16■■□□□ 1.62
PHF1-208ENST00000486845 PPIL2Q13356 520 aa25.16■■□□□ 1.62
PHF1-208ENST00000486845 KIF22Q14807 665 aa25.16■■□□□ 1.62
PHF1-208ENST00000486845 PUM3Q15397 648 aaKnown RBP25.16■■□□□ 1.62
PHF1-208ENST00000486845 DCAF15Q66K64 600 aa25.16■■□□□ 1.62
PHF1-208ENST00000486845 APOBEC3HQ6NTF7 200 aaKnown RBP25.16■■□□□ 1.62
PHF1-208ENST00000486845 HHIPL2Q6UWX4 724 aa25.15■■□□□ 1.62
PHF1-208ENST00000486845 ZKSCAN4Q969J2 545 aaPredicted RBP25.15■■□□□ 1.62
PHF1-208ENST00000486845 PTPRCP08575 1304 aa25.14■■□□□ 1.62
PHF1-208ENST00000486845 BTBD19C9JJ37 291 aa25.14■■□□□ 1.62
PHF1-208ENST00000486845 IRF6O14896 467 aa25.14■■□□□ 1.62
PHF1-208ENST00000486845 SLC4A8Q2Y0W8 1093 aa25.14■■□□□ 1.62
PHF1-208ENST00000486845 FAM9BQ8IZU0 186 aa25.14■■□□□ 1.62
PHF1-208ENST00000486845 MRPL50Q8N5N7 158 aaKnown RBP25.14■■□□□ 1.62
PHF1-208ENST00000486845 GNRH1P01148 92 aa25.13■■□□□ 1.61
PHF1-208ENST00000486845 FGFR2P21802 821 aa25.13■■□□□ 1.61
PHF1-208ENST00000486845 LACTBP83111 547 aaPredicted RBP25.13■■□□□ 1.61
PHF1-208ENST00000486845 KLHDC4Q8TBB5 520 aa25.13■■□□□ 1.61
PHF1-208ENST00000486845 ZNF341Q9BYN7 854 aa25.13■■□□□ 1.61
PHF1-208ENST00000486845 BRCA2P51587 3418 aa25.13■■□□□ 1.61
PHF1-208ENST00000486845 PRMT2P55345 433 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms