RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 UBE3CQ15386 1083 aa11.58□□□□□ -0.56
MCF2L-227ENST00000486806 C8orf34Q49A92 452 aa11.58□□□□□ -0.56
MCF2L-227ENST00000486806 SLC9C2Q5TAH2 1124 aa11.58□□□□□ -0.56
MCF2L-227ENST00000486806 AGBL3Q8NEM8 1001 aa11.58□□□□□ -0.56
MCF2L-227ENST00000486806 RAI14Q9P0K7 980 aa11.58□□□□□ -0.56
MCF2L-227ENST00000486806 GAKO14976 1311 aa11.58□□□□□ -0.56
MCF2L-227ENST00000486806 MAST3O60307 1309 aa11.58□□□□□ -0.56
MCF2L-227ENST00000486806 A0A0D9SFI3 127 aa11.57□□□□□ -0.56
MCF2L-227ENST00000486806 HIP1O00291 1037 aa11.57□□□□□ -0.56
MCF2L-227ENST00000486806 RPS12P25398 132 aaKnown RBP11.57□□□□□ -0.56
MCF2L-227ENST00000486806 TNIP1Q15025 636 aa11.57□□□□□ -0.56
MCF2L-227ENST00000486806 LRRFIP1Q32MZ4 808 aaKnown RBP11.57□□□□□ -0.56
MCF2L-227ENST00000486806 SLFNL1Q499Z3 407 aa11.57□□□□□ -0.56
MCF2L-227ENST00000486806 ZMYM1Q5SVZ6 1142 aa11.57□□□□□ -0.56
MCF2L-227ENST00000486806 ZSCAN25Q6NSZ9 544 aa11.57□□□□□ -0.56
MCF2L-227ENST00000486806 ADGRA1Q86SQ6 560 aa11.57□□□□□ -0.56
MCF2L-227ENST00000486806 DZIP1Q86YF9 867 aaKnown RBP11.57□□□□□ -0.56
MCF2L-227ENST00000486806 MAGEB6Q8N7X4 407 aa11.57□□□□□ -0.56
MCF2L-227ENST00000486806 IL25Q9H293 177 aa11.57□□□□□ -0.56
MCF2L-227ENST00000486806 ZBTB12Q9Y330 459 aaPredicted RBP11.57□□□□□ -0.56
MCF2L-227ENST00000486806 RAD50Q92878 1312 aa11.57□□□□□ -0.56
MCF2L-227ENST00000486806 ZNF532Q9HCE3 1301 aa11.57□□□□□ -0.56
MCF2L-227ENST00000486806 NMIQ13287 307 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-227ENST00000486806 DIXDC1Q155Q3 683 aa11.56□□□□□ -0.56
MCF2L-227ENST00000486806 NAA16Q6N069 864 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-227ENST00000486806 KIAA0825Q8IV33 1275 aa11.56□□□□□ -0.56
MCF2L-227ENST00000486806 GPC2Q8N158 579 aa11.56□□□□□ -0.56
MCF2L-227ENST00000486806 APPBP2Q92624 585 aa11.56□□□□□ -0.56
MCF2L-227ENST00000486806 OSBP2Q969R2 916 aa11.56□□□□□ -0.56
MCF2L-227ENST00000486806 FAM163AQ96GL9 167 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-227ENST00000486806 FAM227BQ96M60 508 aa11.56□□□□□ -0.56
MCF2L-227ENST00000486806 DIAPH3Q9NSV4 1193 aa11.56□□□□□ -0.56
MCF2L-227ENST00000486806 TTF2Q9UNY4 1162 aaKnown RBP11.56□□□□□ -0.56
MCF2L-227ENST00000486806 MROH7-TTC4A0A0A0MT08 1334 aa11.56□□□□□ -0.56
MCF2L-227ENST00000486806 F8W031 263 aaPredicted RBP11.55□□□□□ -0.56
MCF2L-227ENST00000486806 CYP7A1P22680 504 aa11.55□□□□□ -0.56
MCF2L-227ENST00000486806 ZNF280AP59817 542 aaPredicted RBP11.55□□□□□ -0.56
MCF2L-227ENST00000486806 GSTO1P78417 241 aa11.55□□□□□ -0.56
MCF2L-227ENST00000486806 HDLBPQ00341 1268 aaKnown RBP11.55□□□□□ -0.56
MCF2L-227ENST00000486806 DPF2Q92785 391 aa11.55□□□□□ -0.56
MCF2L-227ENST00000486806 MRIQ9BWK5 157 aa11.55□□□□□ -0.56
MCF2L-227ENST00000486806 PUS7LQ9H0K6 701 aaKnown RBP11.55□□□□□ -0.56
MCF2L-227ENST00000486806 HELLSQ9NRZ9 838 aa11.55□□□□□ -0.56
MCF2L-227ENST00000486806 SERPINA10Q9UK55 444 aa11.55□□□□□ -0.56
MCF2L-227ENST00000486806 DAGLAQ9Y4D2 1042 aa11.55□□□□□ -0.56
MCF2L-227ENST00000486806 MYO5AQ9Y4I1 1855 aaKnown RBP11.55□□□□□ -0.56
MCF2L-227ENST00000486806 ADAMTSL1Q8N6G6 1762 aa11.54□□□□□ -0.56
MCF2L-227ENST00000486806 M0R2C6 588 aa11.54□□□□□ -0.56
MCF2L-227ENST00000486806 SGSM2O43147 1006 aa11.54□□□□□ -0.56
MCF2L-227ENST00000486806 GMPSP49915 693 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-227ENST00000486806 MMP14P50281 582 aa11.54□□□□□ -0.56
MCF2L-227ENST00000486806 SCNN1DP51172 638 aa11.54□□□□□ -0.56
MCF2L-227ENST00000486806 CASC1Q6TDU7 716 aa11.54□□□□□ -0.56
MCF2L-227ENST00000486806 HHIPL2Q6UWX4 724 aa11.54□□□□□ -0.56
MCF2L-227ENST00000486806 CWC27Q6UX04 472 aaKnown RBP11.54□□□□□ -0.56
MCF2L-227ENST00000486806 ZNF589Q86UQ0 364 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-227ENST00000486806 L3MBTL3Q96JM7 780 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-227ENST00000486806 ZDHHC15Q96MV8 337 aa11.54□□□□□ -0.56
MCF2L-227ENST00000486806 SEC62Q99442 399 aaKnown RBP11.54□□□□□ -0.56
MCF2L-227ENST00000486806 RIOK1Q9BRS2 568 aaKnown RBP11.54□□□□□ -0.56
MCF2L-227ENST00000486806 ESYT1Q9BSJ8 1104 aa11.54□□□□□ -0.56
MCF2L-227ENST00000486806 CCDC88AQ3V6T2 1871 aa11.54□□□□□ -0.56
MCF2L-227ENST00000486806 MYH7P12883 1935 aa11.54□□□□□ -0.56
MCF2L-227ENST00000486806 AK9Q5TCS8 1911 aa11.54□□□□□ -0.56
MCF2L-227ENST00000486806 GPR75-ASB3A0A0A6YYF3 556 aa11.53□□□□□ -0.56
MCF2L-227ENST00000486806 SHTN1A0MZ66 631 aa11.53□□□□□ -0.56
MCF2L-227ENST00000486806 USP17L8P0C7I0 530 aa11.53□□□□□ -0.56
MCF2L-227ENST00000486806 CRKP46108 304 aa11.53□□□□□ -0.56
MCF2L-227ENST00000486806 MCMDC2Q4G0Z9 681 aa11.53□□□□□ -0.56
MCF2L-227ENST00000486806 SLF2Q8IX21 1173 aa11.53□□□□□ -0.56
MCF2L-227ENST00000486806 MIGA1Q8NAN2 632 aa11.53□□□□□ -0.56
MCF2L-227ENST00000486806 MTMR14Q8NCE2 650 aa11.53□□□□□ -0.56
MCF2L-227ENST00000486806 TEKT1Q969V4 418 aa11.53□□□□□ -0.56
MCF2L-227ENST00000486806 GJA3Q9Y6H8 435 aa11.53□□□□□ -0.56
MCF2L-227ENST00000486806 CCDC171Q6TFL3 1326 aa11.53□□□□□ -0.56
MCF2L-227ENST00000486806 DCAF8L1A6NGE4 600 aa11.52□□□□□ -0.57
MCF2L-227ENST00000486806 GLTPD2A6NH11 291 aa11.52□□□□□ -0.57
MCF2L-227ENST00000486806 FOXP2O15409 715 aa11.52□□□□□ -0.57
MCF2L-227ENST00000486806 GPAA1O43292 621 aa11.52□□□□□ -0.57
MCF2L-227ENST00000486806 DDNO94850 711 aaPredicted RBP11.52□□□□□ -0.57
MCF2L-227ENST00000486806 MBD4O95243 580 aa11.52□□□□□ -0.57
MCF2L-227ENST00000486806 LDHCP07864 332 aa11.52□□□□□ -0.57
MCF2L-227ENST00000486806 BTDP43251 543 aa11.52□□□□□ -0.57
MCF2L-227ENST00000486806 PPP4CP60510 307 aa11.52□□□□□ -0.57
MCF2L-227ENST00000486806 APOBEC3HQ6NTF7 200 aaKnown RBP11.52□□□□□ -0.57
MCF2L-227ENST00000486806 CCDC129Q6ZRS4 1044 aa11.52□□□□□ -0.57
MCF2L-227ENST00000486806 MICALL2Q8IY33 904 aa11.52□□□□□ -0.57
MCF2L-227ENST00000486806 LCORLQ8N3X6 602 aa11.52□□□□□ -0.57
MCF2L-227ENST00000486806 OGFOD1Q8N543 542 aa11.52□□□□□ -0.57
MCF2L-227ENST00000486806 RUFY2Q8WXA3 655 aa11.52□□□□□ -0.57
MCF2L-227ENST00000486806 ZBED3Q96IU2 234 aaPredicted RBP11.52□□□□□ -0.57
MCF2L-227ENST00000486806 GPRC5DQ9NZD1 345 aa11.52□□□□□ -0.57
MCF2L-227ENST00000486806 HDAC9Q9UKV0 1011 aa11.52□□□□□ -0.57
MCF2L-227ENST00000486806 MAGEB6P1A0A0J9YX57 407 aa11.51□□□□□ -0.57
MCF2L-227ENST00000486806 SPDYE2BA6NHP3 402 aa11.51□□□□□ -0.57
MCF2L-227ENST00000486806 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
MCF2L-227ENST00000486806 RHBDL3P58872 404 aa11.51□□□□□ -0.57
MCF2L-227ENST00000486806 DYNLL1P63167 89 aaKnown RBP11.51□□□□□ -0.57
MCF2L-227ENST00000486806 CFAP100Q494V2 611 aa11.51□□□□□ -0.57
MCF2L-227ENST00000486806 CERS3Q8IU89 383 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms