RNA–Protein interactions for RNA: ENST00000486596.5

NECTIN3-208, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 5

Gene NECTIN3, Length 732 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-208ENST00000486596 FAM181BA6NEQ2 426 aa8.05□□□□□ -1.12
NECTIN3-208ENST00000486596 FOXN1O15353 648 aa8.05□□□□□ -1.12
NECTIN3-208ENST00000486596 KCNQ3O43525 872 aa8.05□□□□□ -1.12
NECTIN3-208ENST00000486596 SRGNP10124 158 aa8.05□□□□□ -1.12
NECTIN3-208ENST00000486596 TEFQ10587 303 aa8.05□□□□□ -1.12
NECTIN3-208ENST00000486596 CC2D1BQ5T0F9 858 aaKnown RBP8.05□□□□□ -1.12
NECTIN3-208ENST00000486596 Q6ZVU0 165 aa8.05□□□□□ -1.12
NECTIN3-208ENST00000486596 OCSTAMPQ9BR26 566 aa8.05□□□□□ -1.12
NECTIN3-208ENST00000486596 CNTNAP1P78357 1384 aa8.05□□□□□ -1.12
NECTIN3-208ENST00000486596 ZNF541Q9H0D2 1346 aa8.04□□□□□ -1.12
NECTIN3-208ENST00000486596 PRAMEF22A3QJZ6 481 aa8.04□□□□□ -1.12
NECTIN3-208ENST00000486596 GNAT3A8MTJ3 354 aa8.04□□□□□ -1.12
NECTIN3-208ENST00000486596 U2SURPO15042 1029 aaKnown RBP8.04□□□□□ -1.12
NECTIN3-208ENST00000486596 PPP1R26Q5T8A7 1209 aaPredicted RBP8.04□□□□□ -1.12
NECTIN3-208ENST00000486596 STYK1Q6J9G0 422 aa8.04□□□□□ -1.12
NECTIN3-208ENST00000486596 OLFM4Q6UX06 510 aa8.04□□□□□ -1.12
NECTIN3-208ENST00000486596 C7orf43Q8WVR3 580 aa8.04□□□□□ -1.12
NECTIN3-208ENST00000486596 CNKSR1Q969H4 720 aa8.04□□□□□ -1.12
NECTIN3-208ENST00000486596 SETDB2Q96T68 719 aa8.04□□□□□ -1.12
NECTIN3-208ENST00000486596 DNMT3LQ9UJW3 386 aa8.04□□□□□ -1.12
NECTIN3-208ENST00000486596 CEMIPQ8WUJ3 1361 aa8.04□□□□□ -1.12
NECTIN3-208ENST00000486596 ADAMTSL1Q8N6G6 1762 aa8.04□□□□□ -1.12
NECTIN3-208ENST00000486596 NPHP1O15259 732 aa8.03□□□□□ -1.12
NECTIN3-208ENST00000486596 PPFIA3O75145 1194 aa8.03□□□□□ -1.12
NECTIN3-208ENST00000486596 ST5P78524 1137 aa8.03□□□□□ -1.12
NECTIN3-208ENST00000486596 LDHDQ86WU2 507 aa8.03□□□□□ -1.12
NECTIN3-208ENST00000486596 GAS2L2Q8NHY3 880 aa8.03□□□□□ -1.12
NECTIN3-208ENST00000486596 MASTLQ96GX5 879 aa8.03□□□□□ -1.12
NECTIN3-208ENST00000486596 FMNL2Q96PY5 1086 aa8.03□□□□□ -1.12
NECTIN3-208ENST00000486596 TEX13AQ9BXU3 409 aaPredicted RBP8.03□□□□□ -1.12
NECTIN3-208ENST00000486596 TAF1DQ9H5J8 278 aaPredicted RBP8.03□□□□□ -1.12
NECTIN3-208ENST00000486596 PGPEP1Q9NXJ5 209 aa8.03□□□□□ -1.12
NECTIN3-208ENST00000486596 USP16Q9Y5T5 823 aa8.03□□□□□ -1.12
NECTIN3-208ENST00000486596 SNED1Q8TER0 1413 aa8.03□□□□□ -1.12
NECTIN3-208ENST00000486596 IQCA1LA6NCM1 817 aa8.02□□□□□ -1.13
NECTIN3-208ENST00000486596 BTBD11A6QL63 1104 aa8.02□□□□□ -1.13
NECTIN3-208ENST00000486596 CNGB1Q14028 1251 aaPredicted RBP8.02□□□□□ -1.13
NECTIN3-208ENST00000486596 NBPF20Q3BBV1 942 aa8.02□□□□□ -1.13
NECTIN3-208ENST00000486596 CCDC93Q567U6 631 aa8.02□□□□□ -1.13
NECTIN3-208ENST00000486596 EAPPQ56P03 285 aaPredicted RBP8.02□□□□□ -1.13
NECTIN3-208ENST00000486596 BANK1Q8NDB2 785 aa8.02□□□□□ -1.13
NECTIN3-208ENST00000486596 PHACTR3Q96KR7 559 aa8.02□□□□□ -1.13
NECTIN3-208ENST00000486596 SNRKQ9NRH2 765 aa8.02□□□□□ -1.13
NECTIN3-208ENST00000486596 ZNF277Q9NRM2 450 aaPredicted RBP8.02□□□□□ -1.13
NECTIN3-208ENST00000486596 PCDHB9Q9Y5E1 797 aa8.02□□□□□ -1.13
NECTIN3-208ENST00000486596 RNF123Q5XPI4 1314 aa8.02□□□□□ -1.13
NECTIN3-208ENST00000486596 COL4A5P29400 1685 aa8.02□□□□□ -1.13
NECTIN3-208ENST00000486596 SCN4AP35499 1836 aa8.01□□□□□ -1.13
NECTIN3-208ENST00000486596 TMEM88BA6NKF7 163 aa8.01□□□□□ -1.13
NECTIN3-208ENST00000486596 ZBBXA8MT70 800 aa8.01□□□□□ -1.13
NECTIN3-208ENST00000486596 SPINT1O43278 529 aa8.01□□□□□ -1.13
NECTIN3-208ENST00000486596 PRKAR2BP31323 418 aa8.01□□□□□ -1.13
NECTIN3-208ENST00000486596 FKBP4Q02790 459 aaKnown RBP eCLIP8.01□□□□□ -1.13
NECTIN3-208ENST00000486596 DHX9Q08211 1270 aaKnown RBP8.01□□□□□ -1.13
NECTIN3-208ENST00000486596 INTS6LQ5JSJ4 861 aaKnown RBP8.01□□□□□ -1.13
NECTIN3-208ENST00000486596 SOGA3Q5TF21 947 aa8.01□□□□□ -1.13
NECTIN3-208ENST00000486596 NBPF10Q6P3W6 841 aaKnown RBP8.01□□□□□ -1.13
NECTIN3-208ENST00000486596 SLC51AQ86UW1 340 aa8.01□□□□□ -1.13
NECTIN3-208ENST00000486596 NBPF5PQ86XG9 351 aaPredicted RBP8.01□□□□□ -1.13
NECTIN3-208ENST00000486596 NBPF15Q8N660 670 aa8.01□□□□□ -1.13
NECTIN3-208ENST00000486596 ABCC12Q96J65 1359 aa8□□□□□ -1.13
NECTIN3-208ENST00000486596 KLRG2A4D1S0 409 aaPredicted RBP8□□□□□ -1.13
NECTIN3-208ENST00000486596 TTLL8A6PVC2 850 aa8□□□□□ -1.13
NECTIN3-208ENST00000486596 FAM177BA6PVY3 158 aa8□□□□□ -1.13
NECTIN3-208ENST00000486596 NPR1P16066 1061 aa8□□□□□ -1.13
NECTIN3-208ENST00000486596 EPHX2P34913 555 aa8□□□□□ -1.13
NECTIN3-208ENST00000486596 CBLBQ13191 982 aa8□□□□□ -1.13
NECTIN3-208ENST00000486596 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8□□□□□ -1.13
NECTIN3-208ENST00000486596 NPM2Q86SE8 214 aaKnown RBP8□□□□□ -1.13
NECTIN3-208ENST00000486596 MTMR14Q8NCE2 650 aa8□□□□□ -1.13
NECTIN3-208ENST00000486596 PRDM10Q9NQV6 1147 aa8□□□□□ -1.13
NECTIN3-208ENST00000486596 HACL1Q9UJ83 578 aa8□□□□□ -1.13
NECTIN3-208ENST00000486596 NDUFB9Q9Y6M9 179 aa8□□□□□ -1.13
NECTIN3-208ENST00000486596 LTBP1Q14766 1721 aa8□□□□□ -1.13
NECTIN3-208ENST00000486596 NPC1L1Q9UHC9 1359 aa7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 RASSF10A6NK89 507 aa7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 FZD9O00144 591 aa7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 APBB1O00213 710 aa7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 FBXO45P0C2W1 286 aa7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 IARSP41252 1262 aaKnown RBP7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 CTCFP49711 727 aaPredicted RBP7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 LBX1P52954 281 aa7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 DCTN1Q14203 1278 aa7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 HLFQ16534 295 aa7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 MAP1SQ66K74 1059 aaPredicted RBP7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 CLEC4GQ6UXB4 293 aa7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 MCM10Q7L590 875 aa7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 AIDAQ96BJ3 306 aa7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 TMPRSS4Q9NRS4 437 aa7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 NIP7Q9Y221 180 aaKnown RBP eCLIP7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 THSD7BQ9C0I4 1608 aa7.99□□□□□ -1.13
NECTIN3-208ENST00000486596 SNRPA1P09661 255 aaKnown RBP7.98□□□□□ -1.13
NECTIN3-208ENST00000486596 HSPA8P11142 646 aaKnown RBP7.98□□□□□ -1.13
NECTIN3-208ENST00000486596 FMR1Q06787 632 aaKnown RBP eCLIP7.98□□□□□ -1.13
NECTIN3-208ENST00000486596 TPTE2Q6XPS3 522 aa7.98□□□□□ -1.13
NECTIN3-208ENST00000486596 CNTROBQ8N137 903 aa7.98□□□□□ -1.13
NECTIN3-208ENST00000486596 SYNE4Q8N205 404 aa7.98□□□□□ -1.13
NECTIN3-208ENST00000486596 ZNF652Q9Y2D9 606 aa7.98□□□□□ -1.13
NECTIN3-208ENST00000486596 LAMB4A4D0S4 1761 aa7.97□□□□□ -1.13
NECTIN3-208ENST00000486596 DEFB115Q30KQ5 88 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms