RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 NLRP3Q96P20 1036 aa24■■□□□ 1.43
HPS3-206ENST00000486530 KIF3AQ9Y496 699 aa24■■□□□ 1.43
HPS3-206ENST00000486530 UBR3Q6ZT12 1888 aa24■■□□□ 1.43
HPS3-206ENST00000486530 PLSCR1O15162 318 aa24■■□□□ 1.43
HPS3-206ENST00000486530 ALX1Q15699 326 aa24■■□□□ 1.43
HPS3-206ENST00000486530 NSUN7Q8NE18 718 aaKnown RBP24■■□□□ 1.43
HPS3-206ENST00000486530 GNL3LQ9NVN8 582 aaKnown RBP24■■□□□ 1.43
HPS3-206ENST00000486530 MYH13Q9UKX3 1938 aa23.99■■□□□ 1.43
HPS3-206ENST00000486530 APPP05067 770 aa23.99■■□□□ 1.43
HPS3-206ENST00000486530 KRT85P78386 507 aa23.99■■□□□ 1.43
HPS3-206ENST00000486530 CHST3Q7LGC8 479 aa23.99■■□□□ 1.43
HPS3-206ENST00000486530 FAM184AQ8NB25 1140 aa23.99■■□□□ 1.43
HPS3-206ENST00000486530 MINPP1Q9UNW1 487 aa23.99■■□□□ 1.43
HPS3-206ENST00000486530 MYH15Q9Y2K3 1946 aa23.99■■□□□ 1.43
HPS3-206ENST00000486530 TIAM2Q8IVF5 1701 aa23.98■■□□□ 1.43
HPS3-206ENST00000486530 PRC1O43663 620 aa23.98■■□□□ 1.43
HPS3-206ENST00000486530 PDIA3P30101 505 aaKnown RBP23.98■■□□□ 1.43
HPS3-206ENST00000486530 TRDNQ13061 729 aa23.98■■□□□ 1.43
HPS3-206ENST00000486530 LRSAM1Q6UWE0 723 aa23.98■■□□□ 1.43
HPS3-206ENST00000486530 CCDC24Q8N4L8 307 aa23.98■■□□□ 1.43
HPS3-206ENST00000486530 CELF1Q92879 486 aaKnown RBP23.98■■□□□ 1.43
HPS3-206ENST00000486530 NBPF3Q9H094 633 aa23.98■■□□□ 1.43
HPS3-206ENST00000486530 MBD4O95243 580 aa23.97■■□□□ 1.43
HPS3-206ENST00000486530 GYS1P13807 737 aa23.97■■□□□ 1.43
HPS3-206ENST00000486530 TNRC6CQ9HCJ0 1690 aaKnown RBP23.97■■□□□ 1.43
HPS3-206ENST00000486530 SYCE3A1L190 88 aa23.96■■□□□ 1.43
HPS3-206ENST00000486530 PTPDC1A2A3K4 754 aa23.96■■□□□ 1.43
HPS3-206ENST00000486530 PATL2C9JE40 543 aaKnown RBP23.96■■□□□ 1.43
HPS3-206ENST00000486530 GNAT2P19087 354 aa23.96■■□□□ 1.43
HPS3-206ENST00000486530 HMGB2P26583 209 aaKnown RBP23.96■■□□□ 1.43
HPS3-206ENST00000486530 CAVIN4Q5BKX8 364 aa23.96■■□□□ 1.43
HPS3-206ENST00000486530 FERMT3Q86UX7 667 aa23.96■■□□□ 1.43
HPS3-206ENST00000486530 PNPLA7Q6ZV29 1317 aa23.96■■□□□ 1.43
HPS3-206ENST00000486530 SALL1Q9NSC2 1324 aa23.96■■□□□ 1.43
HPS3-206ENST00000486530 CARMIL3Q8ND23 1372 aa23.96■■□□□ 1.43
HPS3-206ENST00000486530 CTDNEP1O95476 244 aa23.96■■□□□ 1.43
HPS3-206ENST00000486530 APBA3O96018 575 aa23.96■■□□□ 1.43
HPS3-206ENST00000486530 ANTXR2P58335 489 aa23.96■■□□□ 1.43
HPS3-206ENST00000486530 RPS8P62241 208 aaKnown RBP23.96■■□□□ 1.43
HPS3-206ENST00000486530 DDX11Q96FC9 970 aa23.96■■□□□ 1.43
HPS3-206ENST00000486530 LRP2BPQ9P2M1 347 aa23.96■■□□□ 1.43
HPS3-206ENST00000486530 NAP1L2Q9ULW6 460 aaPredicted RBP23.96■■□□□ 1.43
HPS3-206ENST00000486530 H3BQV1 296 aa23.95■■□□□ 1.42
HPS3-206ENST00000486530 CCT2P78371 535 aaKnown RBP23.95■■□□□ 1.42
HPS3-206ENST00000486530 IFFO2Q5TF58 517 aa23.95■■□□□ 1.42
HPS3-206ENST00000486530 TBC1D10CQ8IV04 446 aa23.95■■□□□ 1.42
HPS3-206ENST00000486530 ELP1O95163 1332 aa23.95■■□□□ 1.42
HPS3-206ENST00000486530 TM4SF1P30408 202 aa23.94■■□□□ 1.42
HPS3-206ENST00000486530 GYG1P46976 350 aa23.94■■□□□ 1.42
HPS3-206ENST00000486530 NASPP49321 788 aaPredicted RBP23.94■■□□□ 1.42
HPS3-206ENST00000486530 COL1A1P02452 1464 aaPredicted RBP23.94■■□□□ 1.42
HPS3-206ENST00000486530 NAA16Q6N069 864 aaPredicted RBP23.94■■□□□ 1.42
HPS3-206ENST00000486530 IFNL3Q8IZI9 196 aa23.94■■□□□ 1.42
HPS3-206ENST00000486530 ANKRD2Q9GZV1 360 aa23.94■■□□□ 1.42
HPS3-206ENST00000486530 NAPBQ9H115 298 aa23.94■■□□□ 1.42
HPS3-206ENST00000486530 ZSCAN16Q9H4T2 348 aaPredicted RBP23.94■■□□□ 1.42
HPS3-206ENST00000486530 CACNA1SQ13698 1873 aa23.93■■□□□ 1.42
HPS3-206ENST00000486530 VPS37DQ86XT2 251 aa23.93■■□□□ 1.42
HPS3-206ENST00000486530 SCAND2PQ9GZW5 306 aaPredicted RBP23.93■■□□□ 1.42
HPS3-206ENST00000486530 ARMT1Q9H993 441 aa23.93■■□□□ 1.42
HPS3-206ENST00000486530 NCOA5Q9HCD5 579 aaKnown RBP23.93■■□□□ 1.42
HPS3-206ENST00000486530 EPB41L4AQ9HCS5 686 aaPredicted RBP23.93■■□□□ 1.42
HPS3-206ENST00000486530 DENND2AQ9ULE3 1009 aa23.93■■□□□ 1.42
HPS3-206ENST00000486530 SEMA3EO15041 775 aa23.92■■□□□ 1.42
HPS3-206ENST00000486530 RESTQ13127 1097 aa23.92■■□□□ 1.42
HPS3-206ENST00000486530 CCDC183Q5T5S1 534 aa23.92■■□□□ 1.42
HPS3-206ENST00000486530 ILDR1Q86SU0 546 aaPredicted RBP23.92■■□□□ 1.42
HPS3-206ENST00000486530 GPHNQ9NQX3 736 aaPredicted RBP23.92■■□□□ 1.42
HPS3-206ENST00000486530 KLF18A0A0U1RQI7 1052 aa23.92■■□□□ 1.42
HPS3-206ENST00000486530 DHX16O60231 1041 aaKnown RBP23.92■■□□□ 1.42
HPS3-206ENST00000486530 NACAP1Q9BZK3 213 aa23.92■■□□□ 1.42
HPS3-206ENST00000486530 GOLGA8BA8MQT2 603 aa23.91■■□□□ 1.42
HPS3-206ENST00000486530 AKT1S1Q96B36 256 aa23.91■■□□□ 1.42
HPS3-206ENST00000486530 PDS5AQ29RF7 1337 aaKnown RBP23.9■■□□□ 1.42
HPS3-206ENST00000486530 GSG1L2A8MUP6 293 aa23.9■■□□□ 1.42
HPS3-206ENST00000486530 NPHP1O15259 732 aa23.9■■□□□ 1.42
HPS3-206ENST00000486530 ZNF827Q17R98 1081 aa23.9■■□□□ 1.42
HPS3-206ENST00000486530 KLHL34Q8N239 644 aa23.9■■□□□ 1.42
HPS3-206ENST00000486530 LCORLQ8N3X6 602 aa23.9■■□□□ 1.42
HPS3-206ENST00000486530 CNBD1Q8NA66 436 aa23.9■■□□□ 1.42
HPS3-206ENST00000486530 FAM84BQ96KN1 310 aaPredicted RBP23.9■■□□□ 1.42
HPS3-206ENST00000486530 ANGEL1Q9UNK9 670 aaKnown RBP23.9■■□□□ 1.42
HPS3-206ENST00000486530 IQSEC3Q9UPP2 1182 aaPredicted RBP23.9■■□□□ 1.42
HPS3-206ENST00000486530 LETM1O95202 739 aaPredicted RBP23.9■■□□□ 1.42
HPS3-206ENST00000486530 PRR5LQ6MZQ0 368 aa23.9■■□□□ 1.42
HPS3-206ENST00000486530 TTC6Q86TZ1 520 aa23.9■■□□□ 1.42
HPS3-206ENST00000486530 MAST2Q6P0Q8 1798 aa23.9■■□□□ 1.42
HPS3-206ENST00000486530 CYP7A1P22680 504 aa23.89■■□□□ 1.41
HPS3-206ENST00000486530 FAM173BQ6P4H8 233 aa23.89■■□□□ 1.41
HPS3-206ENST00000486530 FBXO33Q7Z6M2 555 aa23.89■■□□□ 1.41
HPS3-206ENST00000486530 ANP32BQ92688 251 aaKnown RBP23.89■■□□□ 1.41
HPS3-206ENST00000486530 TMEM87BQ96K49 555 aa23.89■■□□□ 1.41
HPS3-206ENST00000486530 RBSNQ9H1K0 784 aa23.89■■□□□ 1.41
HPS3-206ENST00000486530 CNNM2Q9H8M5 875 aa23.89■■□□□ 1.41
HPS3-206ENST00000486530 ABCF2Q9UG63 623 aa23.89■■□□□ 1.41
HPS3-206ENST00000486530 SLC4A4Q9Y6R1 1079 aa23.89■■□□□ 1.41
HPS3-206ENST00000486530 NEDD4P46934 1319 aa23.88■■□□□ 1.41
HPS3-206ENST00000486530 SH2B2O14492 632 aaPredicted RBP23.88■■□□□ 1.41
HPS3-206ENST00000486530 CYB5R4Q7L1T6 521 aa23.88■■□□□ 1.41
HPS3-206ENST00000486530 RAI14Q9P0K7 980 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms