RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 RHPN1Q8TCX5 695 aa24.35■■□□□ 1.49
LIMK1-206ENST00000486361 TDRD3Q9H7E2 651 aaKnown RBP24.35■■□□□ 1.49
LIMK1-206ENST00000486361 VEZTQ9HBM0 779 aa24.35■■□□□ 1.49
LIMK1-206ENST00000486361 HMG20BQ9P0W2 317 aa24.35■■□□□ 1.49
LIMK1-206ENST00000486361 DBNLQ9UJU6 430 aaKnown RBP24.35■■□□□ 1.49
LIMK1-206ENST00000486361 HSP90AB4PQ58FF6 505 aa24.34■■□□□ 1.49
LIMK1-206ENST00000486361 TTC39AQ5SRH9 613 aa24.34■■□□□ 1.49
LIMK1-206ENST00000486361 TEKT1Q969V4 418 aa24.34■■□□□ 1.49
LIMK1-206ENST00000486361 ABCF2Q9UG63 623 aa24.34■■□□□ 1.49
LIMK1-206ENST00000486361 SUGT1Q9Y2Z0 365 aa24.34■■□□□ 1.49
LIMK1-206ENST00000486361 MYO1BO43795 1136 aa24.33■■□□□ 1.49
LIMK1-206ENST00000486361 LDHBP07195 334 aaKnown RBP24.33■■□□□ 1.49
LIMK1-206ENST00000486361 ARID4AP29374 1257 aaPredicted RBP24.33■■□□□ 1.49
LIMK1-206ENST00000486361 DIXDC1Q155Q3 683 aa24.33■■□□□ 1.49
LIMK1-206ENST00000486361 DEFB115Q30KQ5 88 aa24.33■■□□□ 1.49
LIMK1-206ENST00000486361 AACSQ86V21 672 aa24.33■■□□□ 1.49
LIMK1-206ENST00000486361 SNRKQ9NRH2 765 aa24.33■■□□□ 1.49
LIMK1-206ENST00000486361 ZNF70Q9UC06 446 aaPredicted RBP24.33■■□□□ 1.49
LIMK1-206ENST00000486361 SUPT16HQ9Y5B9 1047 aaKnown RBP24.33■■□□□ 1.49
LIMK1-206ENST00000486361 PCDHB15Q9Y5E8 787 aa24.33■■□□□ 1.49
LIMK1-206ENST00000486361 TLL2Q9Y6L7 1015 aa24.33■■□□□ 1.49
LIMK1-206ENST00000486361 TRPM7Q96QT4 1865 aa24.32■■□□□ 1.48
LIMK1-206ENST00000486361 MYH13Q9UKX3 1938 aa24.32■■□□□ 1.48
LIMK1-206ENST00000486361 CEP350Q5VT06 3117 aa24.32■■□□□ 1.48
LIMK1-206ENST00000486361 MCAMP43121 646 aa24.32■■□□□ 1.48
LIMK1-206ENST00000486361 HDLBPQ00341 1268 aaKnown RBP24.32■■□□□ 1.48
LIMK1-206ENST00000486361 CCDC158Q5M9N0 1113 aa24.32■■□□□ 1.48
LIMK1-206ENST00000486361 TBC1D9Q6ZT07 1266 aa24.32■■□□□ 1.48
LIMK1-206ENST00000486361 PAXIP1Q6ZW49 1069 aaPredicted RBP24.32■■□□□ 1.48
LIMK1-206ENST00000486361 APOBEC3FQ8IUX4 373 aaKnown RBP24.32■■□□□ 1.48
LIMK1-206ENST00000486361 SPATA5Q8NB90 893 aa24.32■■□□□ 1.48
LIMK1-206ENST00000486361 GBA2Q9HCG7 927 aaPredicted RBP24.32■■□□□ 1.48
LIMK1-206ENST00000486361 SALL1Q9NSC2 1324 aa24.32■■□□□ 1.48
LIMK1-206ENST00000486361 CNTNAP1P78357 1384 aa24.31■■□□□ 1.48
LIMK1-206ENST00000486361 RASSF10A6NK89 507 aa24.31■■□□□ 1.48
LIMK1-206ENST00000486361 ZBTB22O15209 634 aa24.31■■□□□ 1.48
LIMK1-206ENST00000486361 UQCRFS1P1P0C7P4 283 aa24.31■■□□□ 1.48
LIMK1-206ENST00000486361 SAPCD2Q86UD0 394 aa24.31■■□□□ 1.48
LIMK1-206ENST00000486361 VEGFBP49765 207 aa24.3■■□□□ 1.48
LIMK1-206ENST00000486361 GRM1Q13255 1194 aa24.3■■□□□ 1.48
LIMK1-206ENST00000486361 SPDYE2Q495Y8 402 aa24.3■■□□□ 1.48
LIMK1-206ENST00000486361 APOBEC3HQ6NTF7 200 aaKnown RBP24.3■■□□□ 1.48
LIMK1-206ENST00000486361 HHIPL2Q6UWX4 724 aa24.3■■□□□ 1.48
LIMK1-206ENST00000486361 KIF1BPQ96EK5 621 aa24.3■■□□□ 1.48
LIMK1-206ENST00000486361 MRIQ9BWK5 157 aa24.3■■□□□ 1.48
LIMK1-206ENST00000486361 DEFB129Q9H1M3 183 aa24.3■■□□□ 1.48
LIMK1-206ENST00000486361 MAST3O60307 1309 aa24.3■■□□□ 1.48
LIMK1-206ENST00000486361 RAB11FIP3O75154 756 aa24.29■■□□□ 1.48
LIMK1-206ENST00000486361 CACNB3P54284 484 aa24.29■■□□□ 1.48
LIMK1-206ENST00000486361 MOB2Q70IA6 237 aa24.29■■□□□ 1.48
LIMK1-206ENST00000486361 C2orf69Q8N8R5 385 aa24.29■■□□□ 1.48
LIMK1-206ENST00000486361 ZDHHC15Q96MV8 337 aa24.29■■□□□ 1.48
LIMK1-206ENST00000486361 PDS5AQ29RF7 1337 aaKnown RBP24.29■■□□□ 1.48
LIMK1-206ENST00000486361 TCP10L2B9ZVM9 353 aa24.28■■□□□ 1.48
LIMK1-206ENST00000486361 CYP4F22Q6NT55 531 aa24.28■■□□□ 1.48
LIMK1-206ENST00000486361 ZGPATQ8N5A5 531 aaKnown RBP24.28■■□□□ 1.48
LIMK1-206ENST00000486361 SMARCA5O60264 1052 aaPredicted RBP24.27■■□□□ 1.48
LIMK1-206ENST00000486361 HUNKP57058 714 aa24.27■■□□□ 1.48
LIMK1-206ENST00000486361 PRKG1Q13976 671 aa24.27■■□□□ 1.48
LIMK1-206ENST00000486361 ERICH6Q7L0X2 663 aa24.27■■□□□ 1.48
LIMK1-206ENST00000486361 CLASRPQ8N2M8 674 aaKnown RBP24.27■■□□□ 1.48
LIMK1-206ENST00000486361 DAGLAQ9Y4D2 1042 aa24.27■■□□□ 1.48
LIMK1-206ENST00000486361 RASA3Q14644 834 aa24.26■■□□□ 1.47
LIMK1-206ENST00000486361 SPTY2D1Q68D10 685 aaPredicted RBP24.26■■□□□ 1.47
LIMK1-206ENST00000486361 DZIP1Q86YF9 867 aaKnown RBP24.26■■□□□ 1.47
LIMK1-206ENST00000486361 FZD1Q9UP38 647 aa24.26■■□□□ 1.47
LIMK1-206ENST00000486361 NDUFB9Q9Y6M9 179 aa24.26■■□□□ 1.47
LIMK1-206ENST00000486361 ZAP70P43403 619 aa24.25■■□□□ 1.47
LIMK1-206ENST00000486361 TTLL12Q14166 644 aaPredicted RBP24.25■■□□□ 1.47
LIMK1-206ENST00000486361 JMYQ8N9B5 988 aa24.25■■□□□ 1.47
LIMK1-206ENST00000486361 CAPNS2Q96L46 248 aa24.25■■□□□ 1.47
LIMK1-206ENST00000486361 DCTPP1Q9H773 170 aa24.25■■□□□ 1.47
LIMK1-206ENST00000486361 RAI14Q9P0K7 980 aa24.25■■□□□ 1.47
LIMK1-206ENST00000486361 WDR33Q9C0J8 1336 aaKnown RBP24.25■■□□□ 1.47
LIMK1-206ENST00000486361 CYP2E1P05181 493 aaPredicted RBP24.24■■□□□ 1.47
LIMK1-206ENST00000486361 IFIT2P09913 472 aaKnown RBP24.24■■□□□ 1.47
LIMK1-206ENST00000486361 MECOMQ03112 1051 aa24.24■■□□□ 1.47
LIMK1-206ENST00000486361 NBPF12Q5TAG4 269 aaPredicted RBP24.24■■□□□ 1.47
LIMK1-206ENST00000486361 ZNF384Q8TF68 577 aa24.24■■□□□ 1.47
LIMK1-206ENST00000486361 ZNF512BQ96KM6 892 aaPredicted RBP24.24■■□□□ 1.47
LIMK1-206ENST00000486361 UBE2Q2LH0YL09 131 aa24.23■■□□□ 1.47
LIMK1-206ENST00000486361 CDC42EP5Q6NZY7 148 aa24.23■■□□□ 1.47
LIMK1-206ENST00000486361 CDAN1Q8IWY9 1227 aa24.23■■□□□ 1.47
LIMK1-206ENST00000486361 EXOC6Q8TAG9 804 aa24.23■■□□□ 1.47
LIMK1-206ENST00000486361 LRRCC1Q9C099 1032 aa24.23■■□□□ 1.47
LIMK1-206ENST00000486361 TMEM39BQ9GZU3 492 aa24.23■■□□□ 1.47
LIMK1-206ENST00000486361 LRP2BPQ9P2M1 347 aa24.23■■□□□ 1.47
LIMK1-206ENST00000486361 ECM29Q5VYK3 1845 aa24.22■■□□□ 1.47
LIMK1-206ENST00000486361 NF2P35240 595 aa24.22■■□□□ 1.47
LIMK1-206ENST00000486361 PIH1D3Q9NQM4 214 aaKnown RBP24.22■■□□□ 1.47
LIMK1-206ENST00000486361 USP40Q9NVE5 1235 aa24.22■■□□□ 1.47
LIMK1-206ENST00000486361 AOC2O75106 756 aa24.21■■□□□ 1.47
LIMK1-206ENST00000486361 TNFAIP1Q13829 316 aa24.21■■□□□ 1.47
LIMK1-206ENST00000486361 NSUN4Q96CB9 384 aaKnown RBP24.21■■□□□ 1.47
LIMK1-206ENST00000486361 TMOD2Q9NZR1 351 aa24.21■■□□□ 1.47
LIMK1-206ENST00000486361 PPP2R3BQ9Y5P8 575 aa24.21■■□□□ 1.47
LIMK1-206ENST00000486361 TNNI2P48788 182 aa24.2■■□□□ 1.46
LIMK1-206ENST00000486361 IRX6P78412 446 aaPredicted RBP24.2■■□□□ 1.46
LIMK1-206ENST00000486361 RGMBQ6NW40 437 aa24.2■■□□□ 1.46
LIMK1-206ENST00000486361 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms