RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 NOM1Q5C9Z4 860 aaKnown RBP28.05■■■□□ 2.08
SREBF1-214ENST00000486311 CLMNQ96JQ2 1002 aa28.05■■■□□ 2.08
SREBF1-214ENST00000486311 CFHR5Q9BXR6 569 aa28.05■■■□□ 2.08
SREBF1-214ENST00000486311 API5Q9BZZ5 524 aaKnown RBP28.05■■■□□ 2.08
SREBF1-214ENST00000486311 USP2O75604 605 aaPredicted RBP28.04■■■□□ 2.08
SREBF1-214ENST00000486311 ZBTB48P10074 688 aaPredicted RBP28.04■■■□□ 2.08
SREBF1-214ENST00000486311 IREB2P48200 963 aaKnown RBP28.04■■■□□ 2.08
SREBF1-214ENST00000486311 ZNF296Q8WUU4 475 aaPredicted RBP28.04■■■□□ 2.08
SREBF1-214ENST00000486311 WNK4Q96J92 1243 aa28.03■■■□□ 2.08
SREBF1-214ENST00000486311 ECM29Q5VYK3 1845 aa28.03■■■□□ 2.08
SREBF1-214ENST00000486311 MANSC4A6NHS7 340 aaPredicted RBP28.02■■■□□ 2.08
SREBF1-214ENST00000486311 INHBEP58166 350 aa28.02■■■□□ 2.08
SREBF1-214ENST00000486311 ATG9AQ7Z3C6 839 aa28.02■■■□□ 2.08
SREBF1-214ENST00000486311 LPIN2Q92539 896 aa28.02■■■□□ 2.08
SREBF1-214ENST00000486311 TEPSINQ96N21 525 aa28.02■■■□□ 2.08
SREBF1-214ENST00000486311 FBXO3Q9UK99 471 aa28.02■■■□□ 2.08
SREBF1-214ENST00000486311 GPR25O00155 361 aa28.01■■■□□ 2.07
SREBF1-214ENST00000486311 ALDH1A1P00352 501 aa28.01■■■□□ 2.07
SREBF1-214ENST00000486311 SLC5A1P13866 664 aa28.01■■■□□ 2.07
SREBF1-214ENST00000486311 TEKT1Q969V4 418 aa28.01■■■□□ 2.07
SREBF1-214ENST00000486311 MRIQ9BWK5 157 aa28.01■■■□□ 2.07
SREBF1-214ENST00000486311 SUGT1Q9Y2Z0 365 aa28.01■■■□□ 2.07
SREBF1-214ENST00000486311 RARSP54136 660 aaKnown RBP28■■■□□ 2.07
SREBF1-214ENST00000486311 ANKRD13AQ8IZ07 590 aa28■■■□□ 2.07
SREBF1-214ENST00000486311 ZBTB4Q9P1Z0 1013 aaPredicted RBP28■■■□□ 2.07
SREBF1-214ENST00000486311 HDAC5Q9UQL6 1122 aa28■■■□□ 2.07
SREBF1-214ENST00000486311 ARAP2Q8WZ64 1704 aa28■■■□□ 2.07
SREBF1-214ENST00000486311 TCP10L2B9ZVM9 353 aa27.99■■■□□ 2.07
SREBF1-214ENST00000486311 CIAO1O76071 339 aa27.99■■■□□ 2.07
SREBF1-214ENST00000486311 TNNI2P48788 182 aa27.99■■■□□ 2.07
SREBF1-214ENST00000486311 CDAN1Q8IWY9 1227 aa27.99■■■□□ 2.07
SREBF1-214ENST00000486311 IFNL1Q8IU54 200 aa27.98■■■□□ 2.07
SREBF1-214ENST00000486311 ZDHHC15Q96MV8 337 aa27.98■■■□□ 2.07
SREBF1-214ENST00000486311 TMEM39BQ9GZU3 492 aa27.98■■■□□ 2.07
SREBF1-214ENST00000486311 R3HDMLQ9H3Y0 253 aa27.98■■■□□ 2.07
SREBF1-214ENST00000486311 LRRFIP2Q9Y608 721 aaKnown RBP27.98■■■□□ 2.07
SREBF1-214ENST00000486311 MAST3O60307 1309 aa27.97■■■□□ 2.07
SREBF1-214ENST00000486311 PKN2Q16513 984 aaKnown RBP27.97■■■□□ 2.07
SREBF1-214ENST00000486311 ARHGAP45Q92619 1136 aa27.97■■■□□ 2.07
SREBF1-214ENST00000486311 SIL1Q9H173 461 aa27.97■■■□□ 2.07
SREBF1-214ENST00000486311 GJA5P36382 358 aa27.96■■■□□ 2.07
SREBF1-214ENST00000486311 APOBEC3HQ6NTF7 200 aaKnown RBP27.95■■■□□ 2.06
SREBF1-214ENST00000486311 WDR66Q8TBY9 1149 aa27.95■■■□□ 2.06
SREBF1-214ENST00000486311 MEIS3Q99687 375 aa27.95■■■□□ 2.06
SREBF1-214ENST00000486311 CEP126Q9P2H0 1117 aa27.95■■■□□ 2.06
SREBF1-214ENST00000486311 IGF2BP3O00425 579 aaKnown RBP eCLIP27.94■■■□□ 2.06
SREBF1-214ENST00000486311 FKTNO75072 461 aa27.94■■■□□ 2.06
SREBF1-214ENST00000486311 ATP2B3Q16720 1220 aa27.94■■■□□ 2.06
SREBF1-214ENST00000486311 INTS3Q68E01 1043 aaKnown RBP27.94■■■□□ 2.06
SREBF1-214ENST00000486311 HHIPL2Q6UWX4 724 aa27.94■■■□□ 2.06
SREBF1-214ENST00000486311 IL15P40933 162 aaPredicted RBP27.93■■■□□ 2.06
SREBF1-214ENST00000486311 CACNB3P54284 484 aa27.93■■■□□ 2.06
SREBF1-214ENST00000486311 FKBP1CQ5VVH2 108 aa27.93■■■□□ 2.06
SREBF1-214ENST00000486311 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.93■■■□□ 2.06
SREBF1-214ENST00000486311 ELP3Q9H9T3 547 aa27.93■■■□□ 2.06
SREBF1-214ENST00000486311 COPRSQ9NQ92 184 aa27.93■■■□□ 2.06
SREBF1-214ENST00000486311 TMOD2Q9NZR1 351 aa27.93■■■□□ 2.06
SREBF1-214ENST00000486311 HPS5Q9UPZ3 1129 aa27.93■■■□□ 2.06
SREBF1-214ENST00000486311 TESPA1A2RU30 521 aaPredicted RBP27.92■■■□□ 2.06
SREBF1-214ENST00000486311 FAM83AQ86UY5 434 aa27.92■■■□□ 2.06
SREBF1-214ENST00000486311 MAP3K9P80192 1104 aa27.91■■■□□ 2.06
SREBF1-214ENST00000486311 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.91■■■□□ 2.06
SREBF1-214ENST00000486311 OPTNQ96CV9 577 aa27.91■■■□□ 2.06
SREBF1-214ENST00000486311 PA2G4Q9UQ80 394 aaKnown RBP27.91■■■□□ 2.06
SREBF1-214ENST00000486311 OTUD7BQ6GQQ9 843 aa27.9■■■□□ 2.06
SREBF1-214ENST00000486311 GNL3LQ9NVN8 582 aaKnown RBP27.9■■■□□ 2.06
SREBF1-214ENST00000486311 TNRC18O15417 2968 aaPredicted RBP27.9■■■□□ 2.06
SREBF1-214ENST00000486311 GNAI3P08754 354 aa27.89■■■□□ 2.06
SREBF1-214ENST00000486311 VGLL4Q14135 290 aa27.89■■■□□ 2.06
SREBF1-214ENST00000486311 ZBTB22O15209 634 aa27.88■■■□□ 2.05
SREBF1-214ENST00000486311 SOX10P56693 466 aa27.88■■■□□ 2.05
SREBF1-214ENST00000486311 FBXO46Q6PJ61 603 aaPredicted RBP27.88■■■□□ 2.05
SREBF1-214ENST00000486311 MS4A4AQ96JQ5 239 aa27.88■■■□□ 2.05
SREBF1-214ENST00000486311 PTPN18Q99952 460 aa27.88■■■□□ 2.05
SREBF1-214ENST00000486311 CSADQ9Y600 493 aa27.88■■■□□ 2.05
SREBF1-214ENST00000486311 SEMA3EO15041 775 aa27.87■■■□□ 2.05
SREBF1-214ENST00000486311 HOOK2Q96ED9 719 aa27.87■■■□□ 2.05
SREBF1-214ENST00000486311 SALL1Q9NSC2 1324 aa27.87■■■□□ 2.05
SREBF1-214ENST00000486311 IPO8O15397 1037 aaKnown RBP27.86■■■□□ 2.05
SREBF1-214ENST00000486311 PHKA1P46020 1223 aa27.86■■■□□ 2.05
SREBF1-214ENST00000486311 MTX1Q13505 466 aa27.86■■■□□ 2.05
SREBF1-214ENST00000486311 CNKSR2Q8WXI2 1034 aa27.86■■■□□ 2.05
SREBF1-214ENST00000486311 DENND2AQ9ULE3 1009 aa27.86■■■□□ 2.05
SREBF1-214ENST00000486311 DAGLAQ9Y4D2 1042 aa27.86■■■□□ 2.05
SREBF1-214ENST00000486311 RPAP1Q9BWH6 1393 aaPredicted RBP27.86■■■□□ 2.05
SREBF1-214ENST00000486311 PRDX5P30044 214 aa27.85■■■□□ 2.05
SREBF1-214ENST00000486311 CRHR2Q13324 411 aa27.85■■■□□ 2.05
SREBF1-214ENST00000486311 LAMB1P07942 1786 aa27.84■■■□□ 2.05
SREBF1-214ENST00000486311 SRGAP3O43295 1099 aa27.84■■■□□ 2.05
SREBF1-214ENST00000486311 LDHBP07195 334 aaKnown RBP27.84■■■□□ 2.05
SREBF1-214ENST00000486311 TRIM27P14373 513 aa27.84■■■□□ 2.05
SREBF1-214ENST00000486311 DIXDC1Q155Q3 683 aa27.84■■■□□ 2.05
SREBF1-214ENST00000486311 OTOFQ9HC10 1997 aa27.83■■■□□ 2.05
SREBF1-214ENST00000486311 SPDYE5A6NIY4 337 aa27.83■■■□□ 2.05
SREBF1-214ENST00000486311 SLC34A2O95436 690 aa27.83■■■□□ 2.05
SREBF1-214ENST00000486311 ADORA1P30542 326 aa27.83■■■□□ 2.05
SREBF1-214ENST00000486311 GTF2A2P52657 109 aa27.83■■■□□ 2.05
SREBF1-214ENST00000486311 CCDC102BQ68D86 513 aa27.83■■■□□ 2.05
SREBF1-214ENST00000486311 CDC42EP5Q6NZY7 148 aa27.83■■■□□ 2.05
SREBF1-214ENST00000486311 ATF7IPQ6VMQ6 1270 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms