RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 SUGT1Q9Y2Z0 365 aa22.88■■□□□ 1.25
PRPF40A-209ENST00000486100 PAPPA2Q9BXP8 1791 aa22.88■■□□□ 1.25
PRPF40A-209ENST00000486100 PRKG1Q13976 671 aa22.87■■□□□ 1.25
PRPF40A-209ENST00000486100 SPDYE2Q495Y8 402 aa22.87■■□□□ 1.25
PRPF40A-209ENST00000486100 REM2Q8IYK8 340 aaPredicted RBP22.87■■□□□ 1.25
PRPF40A-209ENST00000486100 WDR66Q8TBY9 1149 aa22.87■■□□□ 1.25
PRPF40A-209ENST00000486100 CSRNP1Q96S65 589 aa22.87■■□□□ 1.25
PRPF40A-209ENST00000486100 TDRD3Q9H7E2 651 aaKnown RBP22.87■■□□□ 1.25
PRPF40A-209ENST00000486100 TNFAIP1Q13829 316 aa22.86■■□□□ 1.25
PRPF40A-209ENST00000486100 RASA3Q14644 834 aa22.86■■□□□ 1.25
PRPF40A-209ENST00000486100 SUPT20HL1Q3ZLR7 823 aa22.86■■□□□ 1.25
PRPF40A-209ENST00000486100 LDLRAD1Q5T700 205 aa22.86■■□□□ 1.25
PRPF40A-209ENST00000486100 GNL3LQ9NVN8 582 aaKnown RBP22.86■■□□□ 1.25
PRPF40A-209ENST00000486100 TEKT1Q969V4 418 aa22.85■■□□□ 1.25
PRPF40A-209ENST00000486100 ANGEL1Q9UNK9 670 aaKnown RBP22.85■■□□□ 1.25
PRPF40A-209ENST00000486100 PPP1R12BO60237 982 aaPredicted RBP22.84■■□□□ 1.25
PRPF40A-209ENST00000486100 MAP3K11Q16584 847 aa22.84■■□□□ 1.25
PRPF40A-209ENST00000486100 MAST3O60307 1309 aa22.83■■□□□ 1.25
PRPF40A-209ENST00000486100 ZBTB22O15209 634 aa22.83■■□□□ 1.25
PRPF40A-209ENST00000486100 TIMM10P62072 90 aa22.83■■□□□ 1.25
PRPF40A-209ENST00000486100 NBPF12Q5TAG4 269 aaPredicted RBP22.83■■□□□ 1.25
PRPF40A-209ENST00000486100 FTSJ3Q8IY81 847 aaKnown RBP22.83■■□□□ 1.25
PRPF40A-209ENST00000486100 ZDHHC15Q96MV8 337 aa22.83■■□□□ 1.25
PRPF40A-209ENST00000486100 SAGE1Q9NXZ1 904 aa22.83■■□□□ 1.25
PRPF40A-209ENST00000486100 AKAP2Q9Y2D5 859 aa22.83■■□□□ 1.25
PRPF40A-209ENST00000486100 PNMA6EA0A0J9YXQ4 647 aa22.82■■□□□ 1.24
PRPF40A-209ENST00000486100 SEMA3EO15041 775 aa22.82■■□□□ 1.24
PRPF40A-209ENST00000486100 PHKA1P46020 1223 aa22.82■■□□□ 1.24
PRPF40A-209ENST00000486100 TFCP2Q12800 502 aa22.82■■□□□ 1.24
PRPF40A-209ENST00000486100 HHIPL2Q6UWX4 724 aa22.82■■□□□ 1.24
PRPF40A-209ENST00000486100 RNF186Q9NXI6 227 aa22.82■■□□□ 1.24
PRPF40A-209ENST00000486100 DENND2AQ9ULE3 1009 aa22.82■■□□□ 1.24
PRPF40A-209ENST00000486100 FZD1Q9UP38 647 aa22.82■■□□□ 1.24
PRPF40A-209ENST00000486100 UNCXA6NJT0 531 aa22.81■■□□□ 1.24
PRPF40A-209ENST00000486100 ADORA1P30542 326 aa22.81■■□□□ 1.24
PRPF40A-209ENST00000486100 TNNI2P48788 182 aa22.81■■□□□ 1.24
PRPF40A-209ENST00000486100 CCDC102BQ68D86 513 aa22.81■■□□□ 1.24
PRPF40A-209ENST00000486100 TCP10L2B9ZVM9 353 aa22.8■■□□□ 1.24
PRPF40A-209ENST00000486100 TRPA1O75762 1119 aa22.8■■□□□ 1.24
PRPF40A-209ENST00000486100 G3BP1Q13283 466 aaKnown RBP eCLIP22.8■■□□□ 1.246e-8■□□□□ 11.3
PRPF40A-209ENST00000486100 APOBEC3HQ6NTF7 200 aaKnown RBP22.8■■□□□ 1.24
PRPF40A-209ENST00000486100 SLC10A4Q96EP9 437 aa22.8■■□□□ 1.24
PRPF40A-209ENST00000486100 A0A1B0GUL7 405 aa22.79■■□□□ 1.24
PRPF40A-209ENST00000486100 ZBTB7BO15156 539 aaPredicted RBP22.79■■□□□ 1.24
PRPF40A-209ENST00000486100 USP2O75604 605 aaPredicted RBP22.79■■□□□ 1.24
PRPF40A-209ENST00000486100 RLBP1P12271 317 aa22.79■■□□□ 1.24
PRPF40A-209ENST00000486100 ATP8B2P98198 1209 aa22.79■■□□□ 1.24
PRPF40A-209ENST00000486100 TEPSINQ96N21 525 aa22.79■■□□□ 1.24
PRPF40A-209ENST00000486100 SALL1Q9NSC2 1324 aa22.79■■□□□ 1.24
PRPF40A-209ENST00000486100 SSC5DA1L4H1 1573 aa22.78■■□□□ 1.24
PRPF40A-209ENST00000486100 CAPN15O75808 1086 aa22.78■■□□□ 1.24
PRPF40A-209ENST00000486100 IREB2P48200 963 aaKnown RBP22.78■■□□□ 1.24
PRPF40A-209ENST00000486100 TM4SF4P48230 202 aa22.78■■□□□ 1.24
PRPF40A-209ENST00000486100 ITPRIPQ8IWB1 547 aa22.78■■□□□ 1.24
PRPF40A-209ENST00000486100 XAGE2Q96GT9 111 aa22.78■■□□□ 1.24
PRPF40A-209ENST00000486100 LDHBP07195 334 aaKnown RBP22.77■■□□□ 1.24
PRPF40A-209ENST00000486100 PRDX5P30044 214 aa22.77■■□□□ 1.24
PRPF40A-209ENST00000486100 MKRN3Q13064 507 aaKnown RBP22.77■■□□□ 1.24
PRPF40A-209ENST00000486100 POLA2Q14181 598 aa22.77■■□□□ 1.24
PRPF40A-209ENST00000486100 FKBP1CQ5VVH2 108 aa22.77■■□□□ 1.24
PRPF40A-209ENST00000486100 SPRYD7Q5W111 196 aa22.77■■□□□ 1.24
PRPF40A-209ENST00000486100 NEUROD6Q96NK8 337 aa22.77■■□□□ 1.24
PRPF40A-209ENST00000486100 TMEM39BQ9GZU3 492 aa22.77■■□□□ 1.24
PRPF40A-209ENST00000486100 TMOD2Q9NZR1 351 aa22.77■■□□□ 1.24
PRPF40A-209ENST00000486100 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.77■■□□□ 1.24
PRPF40A-209ENST00000486100 CACNB3P54284 484 aa22.76■■□□□ 1.23
PRPF40A-209ENST00000486100 MVPQ14764 893 aaKnown RBP22.76■■□□□ 1.23
PRPF40A-209ENST00000486100 SSH3Q8TE77 659 aa22.76■■□□□ 1.23
PRPF40A-209ENST00000486100 ARAP2Q8WZ64 1704 aa22.75■■□□□ 1.23
PRPF40A-209ENST00000486100 FAM83AQ86UY5 434 aa22.75■■□□□ 1.23
PRPF40A-209ENST00000486100 ANKRD13AQ8IZ07 590 aa22.75■■□□□ 1.23
PRPF40A-209ENST00000486100 ZGPATQ8N5A5 531 aaKnown RBP22.75■■□□□ 1.23
PRPF40A-209ENST00000486100 CLMNQ96JQ2 1002 aa22.75■■□□□ 1.23
PRPF40A-209ENST00000486100 ECM29Q5VYK3 1845 aa22.75■■□□□ 1.23
PRPF40A-209ENST00000486100 SREBF2Q12772 1141 aa22.74■■□□□ 1.23
PRPF40A-209ENST00000486100 RASGRF1Q13972 1273 aa22.74■■□□□ 1.23
PRPF40A-209ENST00000486100 DIXDC1Q155Q3 683 aa22.74■■□□□ 1.23
PRPF40A-209ENST00000486100 CDAN1Q8IWY9 1227 aa22.74■■□□□ 1.23
PRPF40A-209ENST00000486100 C1orf115Q9H7X2 142 aa22.74■■□□□ 1.23
PRPF40A-209ENST00000486100 DAGLAQ9Y4D2 1042 aa22.74■■□□□ 1.23
PRPF40A-209ENST00000486100 PDS5AQ29RF7 1337 aaKnown RBP22.74■■□□□ 1.23
PRPF40A-209ENST00000486100 ZBTB48P10074 688 aaPredicted RBP22.73■■□□□ 1.23
PRPF40A-209ENST00000486100 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.73■■□□□ 1.23
PRPF40A-209ENST00000486100 MS4A1P11836 297 aa22.72■■□□□ 1.23
PRPF40A-209ENST00000486100 INHBEP58166 350 aa22.72■■□□□ 1.23
PRPF40A-209ENST00000486100 GORABQ5T7V8 394 aa22.72■■□□□ 1.23
PRPF40A-209ENST00000486100 PANK1Q8TE04 598 aa22.72■■□□□ 1.23
PRPF40A-209ENST00000486100 WNK4Q96J92 1243 aa22.72■■□□□ 1.23
PRPF40A-209ENST00000486100 MANSC4A6NHS7 340 aaPredicted RBP22.71■■□□□ 1.23
PRPF40A-209ENST00000486100 SURF6O75683 361 aaKnown RBP22.71■■□□□ 1.23
PRPF40A-209ENST00000486100 SPTY2D1Q68D10 685 aaPredicted RBP22.71■■□□□ 1.23
PRPF40A-209ENST00000486100 CDC42EP5Q6NZY7 148 aa22.71■■□□□ 1.23
PRPF40A-209ENST00000486100 ABHD8Q96I13 439 aa22.71■■□□□ 1.23
PRPF40A-209ENST00000486100 GPR108Q9NPR9 543 aa22.71■■□□□ 1.23
PRPF40A-209ENST00000486100 MAP3K9P80192 1104 aa22.7■■□□□ 1.22
PRPF40A-209ENST00000486100 HOOK2Q96ED9 719 aa22.7■■□□□ 1.22
PRPF40A-209ENST00000486100 ABCF2Q9UG63 623 aa22.7■■□□□ 1.22
PRPF40A-209ENST00000486100 NOP58Q9Y2X3 529 aaKnown RBP22.7■■□□□ 1.22
PRPF40A-209ENST00000486100 OS9Q13438 667 aaPredicted RBP22.69■■□□□ 1.22
PRPF40A-209ENST00000486100 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms