RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 GABPB2Q8TAK5 448 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 SLC5A4Q9NY91 659 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 KIF22Q14807 665 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 TCEANC2Q96MN5 208 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 KRT86O43790 486 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 GMNNO75496 209 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 GCP02774 474 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 TIGD1Q96MW7 591 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 NOX5Q96PH1 765 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 SAP30BPQ9UHR5 308 aaKnown RBP11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 SPTLC2O15270 562 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 DNM2P50570 870 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 INF2Q27J81 1249 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 NIM1KQ8IY84 436 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 HACE1Q8IYU2 909 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 GPCPD1Q9NPB8 672 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 MTUS1Q9ULD2 1270 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 PDE1AP54750 535 aa11.9□□□□□ -0.5
SRGAP3-207ENST00000485983 EXOC7Q9UPT5 735 aa11.9□□□□□ -0.5
SRGAP3-207ENST00000485983 H7C1D1 291 aa11.9□□□□□ -0.5
SRGAP3-207ENST00000485983 KRT5P13647 590 aa11.9□□□□□ -0.5
SRGAP3-207ENST00000485983 ALDH3A1P30838 453 aa11.9□□□□□ -0.5
SRGAP3-207ENST00000485983 IRX3P78415 501 aaPredicted RBP11.9□□□□□ -0.5
SRGAP3-207ENST00000485983 RASA3Q14644 834 aa11.9□□□□□ -0.5
SRGAP3-207ENST00000485983 KMT5BQ4FZB7 885 aa11.9□□□□□ -0.5
SRGAP3-207ENST00000485983 IQUBQ8NA54 791 aa11.9□□□□□ -0.5
SRGAP3-207ENST00000485983 PPIP5K1Q6PFW1 1433 aa11.9□□□□□ -0.5
SRGAP3-207ENST00000485983 SV2BQ7L1I2 683 aa11.9□□□□□ -0.5
SRGAP3-207ENST00000485983 SMCR8Q8TEV9 937 aaPredicted RBP11.9□□□□□ -0.5
SRGAP3-207ENST00000485983 TMX3Q96JJ7 454 aa11.9□□□□□ -0.5
SRGAP3-207ENST00000485983 HAUS2Q9NVX0 235 aa11.9□□□□□ -0.5
SRGAP3-207ENST00000485983 TTC41PQ6P2S7 1318 aa11.9□□□□□ -0.5
SRGAP3-207ENST00000485983 DAPK3O43293 454 aa11.9□□□□□ -0.51
SRGAP3-207ENST00000485983 EPB41P11171 864 aaKnown RBP11.9□□□□□ -0.51
SRGAP3-207ENST00000485983 SDSP20132 328 aa11.9□□□□□ -0.51
SRGAP3-207ENST00000485983 NMIQ13287 307 aaPredicted RBP11.9□□□□□ -0.51
SRGAP3-207ENST00000485983 HSP90AA4PQ58FG1 418 aa11.9□□□□□ -0.51
SRGAP3-207ENST00000485983 PROCA1Q8NCQ7 364 aaPredicted RBP11.9□□□□□ -0.51
SRGAP3-207ENST00000485983 PRPF31Q8WWY3 499 aaKnown RBP11.9□□□□□ -0.51
SRGAP3-207ENST00000485983 FAM204AQ9H8W3 233 aa11.9□□□□□ -0.51
SRGAP3-207ENST00000485983 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.9□□□□□ -0.51
SRGAP3-207ENST00000485983 SH3TC1Q8TE82 1336 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 EAPPQ56P03 285 aaPredicted RBP11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 DPY19L2Q6NUT2 758 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 PTPDC1A2A3K4 754 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 PRKG1Q13976 671 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 DCAF17Q5H9S7 520 aaPredicted RBP11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 CSRNP2Q9H175 543 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 PA2G4Q9UQ80 394 aaKnown RBP11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 MYCLP12524 364 aaPredicted RBP11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 PPP1R2P41236 205 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 HAUS3Q68CZ6 603 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 WDR66Q8TBY9 1149 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 FLT4P35916 1363 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 NCKAP5LQ9HCH0 1330 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 CRCPO75575 148 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 CFAP157Q5JU67 520 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 ANKRD44Q8N8A2 993 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 CCDC114Q96M63 670 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 MTRF1LQ9UGC7 380 aaKnown RBP11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 RAPGEF1Q13905 1077 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 EIF4A2Q14240 407 aaKnown RBP11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 PPP1R7Q15435 360 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 LETM2Q2VYF4 491 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 USP48Q86UV5 1035 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 ZNF526Q8TF50 670 aaPredicted RBP11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 ESYT1Q9BSJ8 1104 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 TBC1D2Q9BYX2 928 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 AGTPBP1Q9UPW5 1226 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 STK24Q9Y6E0 443 aa11.89□□□□□ -0.51
SRGAP3-207ENST00000485983 PTPN23Q9H3S7 1636 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 E7EVH7 732 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 FBLN1P23142 703 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 CCT6AP40227 531 aaKnown RBP11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 MBD4O95243 580 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 TPD52P55327 224 aaPredicted RBP11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 CBX1P83916 185 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 UBXN1Q04323 297 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 ZYXQ15942 572 aaKnown RBP11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 EP400NLQ6ZTU2 488 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 CCDC125Q86Z20 511 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 NSMCE1Q8WV22 266 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 RNF216Q9NWF9 866 aaPredicted RBP11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 CCDC171Q6TFL3 1326 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 CHMP2AO43633 222 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 TFCP2Q12800 502 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 LEO1Q8WVC0 666 aaPredicted RBP11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 PFDN4Q9NQP4 134 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 MKRN1Q9UHC7 482 aaKnown RBP11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 ARHGEF35A5YM69 484 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 ARID4AP29374 1257 aaPredicted RBP11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 PLCD1P51178 756 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 CALCOCO2Q13137 446 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 GEN1Q17RS7 908 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 GIMAP6Q6P9H5 292 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 CSADQ9Y600 493 aa11.88□□□□□ -0.51
SRGAP3-207ENST00000485983 OPA1O60313 960 aa11.87□□□□□ -0.51
SRGAP3-207ENST00000485983 STK10O94804 968 aaKnown RBP11.87□□□□□ -0.51
SRGAP3-207ENST00000485983 APBA3O96018 575 aa11.87□□□□□ -0.51
SRGAP3-207ENST00000485983 MTHFSDQ2M296 383 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms