RNA–Protein interactions for RNA: ENST00000485952.1

SPTLC3-206, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-206ENST00000485952 ZNF423Q2M1K9 1284 aa6.98□□□□□ -1.29
SPTLC3-206ENST00000485952 ZNF385CQ66K41 422 aaPredicted RBP6.98□□□□□ -1.29
SPTLC3-206ENST00000485952 MAP4K3Q8IVH8 894 aa6.98□□□□□ -1.29
SPTLC3-206ENST00000485952 DCAF11Q8TEB1 546 aa6.98□□□□□ -1.29
SPTLC3-206ENST00000485952 SLC7A3Q8WY07 619 aa6.98□□□□□ -1.29
SPTLC3-206ENST00000485952 RSRP1Q9BUV0 290 aa6.98□□□□□ -1.29
SPTLC3-206ENST00000485952 TANGO6Q9C0B7 1094 aa6.98□□□□□ -1.29
SPTLC3-206ENST00000485952 SOX17Q9H6I2 414 aaPredicted RBP6.98□□□□□ -1.29
SPTLC3-206ENST00000485952 PRKAG2Q9UGJ0 569 aa6.98□□□□□ -1.29
SPTLC3-206ENST00000485952 LMNB1P20700 586 aa6.97□□□□□ -1.29
SPTLC3-206ENST00000485952 C19orf57Q0VDD7 668 aa6.97□□□□□ -1.29
SPTLC3-206ENST00000485952 MAP3K11Q16584 847 aa6.97□□□□□ -1.29
SPTLC3-206ENST00000485952 TTBK2Q6IQ55 1244 aa6.97□□□□□ -1.29
SPTLC3-206ENST00000485952 TXNDC11Q6PKC3 985 aa6.97□□□□□ -1.29
SPTLC3-206ENST00000485952 OSGEPQ9NPF4 335 aa6.97□□□□□ -1.29
SPTLC3-206ENST00000485952 COPRSQ9NQ92 184 aa6.97□□□□□ -1.29
SPTLC3-206ENST00000485952 CUX2O14529 1486 aa6.97□□□□□ -1.29
SPTLC3-206ENST00000485952 SOX1O00570 391 aaPredicted RBP6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 FSCN2O14926 492 aa6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 NID1P14543 1247 aa6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 NME2P22392 152 aa6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 GBP2P32456 591 aaPredicted RBP6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 LIG3P49916 1009 aa6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 GSTM4Q03013 218 aa6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 AP3B2Q13367 1082 aa6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 GNL2Q13823 731 aaKnown RBP6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 LCE2AQ5TA79 106 aaPredicted RBP6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 PCNX4Q63HM2 1172 aa6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 DIEXFQ68CQ4 756 aaKnown RBP6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 DMRTC2Q8IXT2 367 aaPredicted RBP6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 DTWD1Q8N5C7 304 aa6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 KLHL23Q8NBE8 558 aa6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 TMEM74Q96NL1 305 aa6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 TRIM56Q9BRZ2 755 aaKnown RBP6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 EMILIN2Q9BXX0 1053 aa6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 KBTBD4Q9NVX7 518 aa6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 INPP5FQ9Y2H2 1132 aa6.96□□□□□ -1.3
SPTLC3-206ENST00000485952 SPDYE3A6NKU9 549 aa6.95□□□□□ -1.3
SPTLC3-206ENST00000485952 WIPF1O43516 503 aa6.95□□□□□ -1.3
SPTLC3-206ENST00000485952 CYP11A1P05108 521 aa6.95□□□□□ -1.3
SPTLC3-206ENST00000485952 RPS26P62854 115 aaKnown RBP6.95□□□□□ -1.3
SPTLC3-206ENST00000485952 HNRNPUQ00839 825 aaKnown RBP eCLIP6.95□□□□□ -1.3
SPTLC3-206ENST00000485952 LRRC14Q15048 493 aa6.95□□□□□ -1.3
SPTLC3-206ENST00000485952 TRAPPC3LQ5T215 181 aa6.95□□□□□ -1.3
SPTLC3-206ENST00000485952 SULF2Q8IWU5 870 aa6.95□□□□□ -1.3
SPTLC3-206ENST00000485952 PAGE1O75459 146 aa6.94□□□□□ -1.3
SPTLC3-206ENST00000485952 GJA8P48165 433 aa6.94□□□□□ -1.3
SPTLC3-206ENST00000485952 RAC1P63000 192 aa6.94□□□□□ -1.3
SPTLC3-206ENST00000485952 PHC3Q8NDX5 983 aa6.94□□□□□ -1.3
SPTLC3-206ENST00000485952 CORO1BQ9BR76 489 aa6.94□□□□□ -1.3
SPTLC3-206ENST00000485952 CBX8Q9HC52 389 aa6.94□□□□□ -1.3
SPTLC3-206ENST00000485952 MKL2Q9ULH7 1088 aa6.94□□□□□ -1.3
SPTLC3-206ENST00000485952 CYP8B1Q9UNU6 501 aa6.94□□□□□ -1.3
SPTLC3-206ENST00000485952 SCRIBQ14160 1630 aa6.94□□□□□ -1.3
SPTLC3-206ENST00000485952 MINDY4BA8MYZ0 360 aa6.93□□□□□ -1.3
SPTLC3-206ENST00000485952 F6X3S4 739 aa6.93□□□□□ -1.3
SPTLC3-206ENST00000485952 GNB5O14775 395 aa6.93□□□□□ -1.3
SPTLC3-206ENST00000485952 ATP2B1P20020 1258 aa6.93□□□□□ -1.3
SPTLC3-206ENST00000485952 ARNTP27540 789 aa6.93□□□□□ -1.3
SPTLC3-206ENST00000485952 DNAJA1P31689 397 aaKnown RBP6.93□□□□□ -1.3
SPTLC3-206ENST00000485952 ARID5AQ03989 594 aa6.93□□□□□ -1.3
SPTLC3-206ENST00000485952 COL9A3Q14050 684 aaPredicted RBP6.93□□□□□ -1.3
SPTLC3-206ENST00000485952 SUZ12Q15022 739 aaKnown RBP6.93□□□□□ -1.3
SPTLC3-206ENST00000485952 SETDB1Q15047 1291 aa6.93□□□□□ -1.3
SPTLC3-206ENST00000485952 AGMOQ6ZNB7 445 aa6.93□□□□□ -1.3
SPTLC3-206ENST00000485952 PODNQ7Z5L7 613 aa6.93□□□□□ -1.3
SPTLC3-206ENST00000485952 ARMC5Q96C12 935 aa6.93□□□□□ -1.3
SPTLC3-206ENST00000485952 CARD10Q9BWT7 1032 aa6.93□□□□□ -1.3
SPTLC3-206ENST00000485952 ARHGEF15O94989 841 aa6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 GSTP1P09211 210 aaKnown RBP6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 HOXB4P17483 251 aaPredicted RBP6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 BMP6P22004 513 aa6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 EIF4A3P38919 411 aaKnown RBP6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 RBL2Q08999 1139 aa6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 PAK2Q13177 524 aa6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 POU4F3Q15319 338 aa6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 HP1BP3Q5SSJ5 553 aaPredicted RBP6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 LLGL2Q6P1M3 1020 aa6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 ZSCAN1Q8NBB4 408 aa6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 DHX38Q92620 1227 aaKnown RBP6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 KLHDC7BQ96G42 594 aa6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 SPON2Q9BUD6 331 aa6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 MIR1-1HGQ9H1L0 117 aa6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 TLR6Q9Y2C9 796 aa6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 ZCCHC6Q5VYS8 1495 aaKnown RBP6.92□□□□□ -1.3
SPTLC3-206ENST00000485952 ATF4P18848 351 aaPredicted RBP6.91□□□□□ -1.3
SPTLC3-206ENST00000485952 CD68P34810 354 aaPredicted RBP6.91□□□□□ -1.3
SPTLC3-206ENST00000485952 SNRPNP63162 240 aaKnown RBP6.91□□□□□ -1.3
SPTLC3-206ENST00000485952 LMNB2Q03252 620 aa6.91□□□□□ -1.3
SPTLC3-206ENST00000485952 CAMK2GQ13555 558 aaPredicted RBP6.91□□□□□ -1.3
SPTLC3-206ENST00000485952 SNAP47Q5SQN1 464 aa6.91□□□□□ -1.3
SPTLC3-206ENST00000485952 HGSNATQ68CP4 663 aa6.91□□□□□ -1.3
SPTLC3-206ENST00000485952 SCARA3Q6AZY7 606 aa6.91□□□□□ -1.3
SPTLC3-206ENST00000485952 LINC00114Q6XXX2 140 aa6.91□□□□□ -1.3
SPTLC3-206ENST00000485952 DPH6Q7L8W6 267 aa6.91□□□□□ -1.3
SPTLC3-206ENST00000485952 KIAA0825Q8IV33 1275 aa6.91□□□□□ -1.3
SPTLC3-206ENST00000485952 RASGRP4Q8TDF6 673 aa6.91□□□□□ -1.3
SPTLC3-206ENST00000485952 RHOVQ96L33 236 aa6.91□□□□□ -1.3
SPTLC3-206ENST00000485952 PLVAPQ9BX97 442 aa6.91□□□□□ -1.3
SPTLC3-206ENST00000485952 NOP53Q9NZM5 478 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms