RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 CCDC158Q5M9N0 1113 aa15.4■□□□□ 0.06
PTCD1-205ENST00000485746 TTC39AQ5SRH9 613 aa15.4■□□□□ 0.06
PTCD1-205ENST00000485746 RPAP2Q8IXW5 612 aaPredicted RBP15.4■□□□□ 0.06
PTCD1-205ENST00000485746 AIDAQ96BJ3 306 aa15.4■□□□□ 0.06
PTCD1-205ENST00000485746 BCL11AQ9H165 835 aa15.4■□□□□ 0.06
PTCD1-205ENST00000485746 TDRD3Q9H7E2 651 aaKnown RBP15.4■□□□□ 0.06
PTCD1-205ENST00000485746 ZBTB40Q9NUA8 1239 aa15.4■□□□□ 0.06
PTCD1-205ENST00000485746 TMOD2Q9NZR1 351 aa15.4■□□□□ 0.06
PTCD1-205ENST00000485746 ZNF70Q9UC06 446 aaPredicted RBP15.4■□□□□ 0.06
PTCD1-205ENST00000485746 NOP58Q9Y2X3 529 aaKnown RBP15.4■□□□□ 0.06
PTCD1-205ENST00000485746 PSME4Q14997 1843 aa15.4■□□□□ 0.06
PTCD1-205ENST00000485746 TNFAIP1Q13829 316 aa15.39■□□□□ 0.05
PTCD1-205ENST00000485746 TNNI3KQ59H18 835 aa15.39■□□□□ 0.05
PTCD1-205ENST00000485746 SPTY2D1Q68D10 685 aaPredicted RBP15.39■□□□□ 0.05
PTCD1-205ENST00000485746 ERC1Q8IUD2 1116 aa15.39■□□□□ 0.05
PTCD1-205ENST00000485746 HHIPL1Q96JK4 782 aa15.39■□□□□ 0.05
PTCD1-205ENST00000485746 DEFB129Q9H1M3 183 aa15.39■□□□□ 0.05
PTCD1-205ENST00000485746 GPR108Q9NPR9 543 aa15.39■□□□□ 0.05
PTCD1-205ENST00000485746 ABCF2Q9UG63 623 aa15.39■□□□□ 0.05
PTCD1-205ENST00000485746 EXOC6BQ9Y2D4 811 aa15.39■□□□□ 0.05
PTCD1-205ENST00000485746 FPGT-TNNI3KV9GXZ4 949 aa15.39■□□□□ 0.05
PTCD1-205ENST00000485746 TCP10L2B9ZVM9 353 aa15.38■□□□□ 0.05
PTCD1-205ENST00000485746 APBB1O00213 710 aa15.38■□□□□ 0.05
PTCD1-205ENST00000485746 UQCRFS1P1P0C7P4 283 aa15.38■□□□□ 0.05
PTCD1-205ENST00000485746 HSPA1AP0DMV8 641 aaKnown RBP15.38■□□□□ 0.05
PTCD1-205ENST00000485746 HSPA1BP0DMV9 641 aaKnown RBP15.38■□□□□ 0.05
PTCD1-205ENST00000485746 TNNI2P48788 182 aa15.38■□□□□ 0.05
PTCD1-205ENST00000485746 ZNF157P51786 506 aaPredicted RBP15.38■□□□□ 0.05
PTCD1-205ENST00000485746 FKBP1BP68106 108 aa15.38■□□□□ 0.05
PTCD1-205ENST00000485746 PRKG1Q13976 671 aa15.38■□□□□ 0.05
PTCD1-205ENST00000485746 RGMBQ6NW40 437 aa15.38■□□□□ 0.05
PTCD1-205ENST00000485746 ARMC9Q7Z3E5 817 aa15.38■□□□□ 0.05
PTCD1-205ENST00000485746 BEGAINQ9BUH8 593 aa15.38■□□□□ 0.05
PTCD1-205ENST00000485746 MRIQ9BWK5 157 aa15.38■□□□□ 0.05
PTCD1-205ENST00000485746 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.38■□□□□ 0.05
PTCD1-205ENST00000485746 PPP2R3BQ9Y5P8 575 aa15.38■□□□□ 0.05
PTCD1-205ENST00000485746 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.38■□□□□ 0.05
PTCD1-205ENST00000485746 RASGRF1Q13972 1273 aa15.37■□□□□ 0.05
PTCD1-205ENST00000485746 SUPT20HL1Q3ZLR7 823 aa15.37■□□□□ 0.05
PTCD1-205ENST00000485746 SPDYE2Q495Y8 402 aa15.37■□□□□ 0.05
PTCD1-205ENST00000485746 ERICH6Q7L0X2 663 aa15.37■□□□□ 0.05
PTCD1-205ENST00000485746 DZIP1Q86YF9 867 aaKnown RBP15.37■□□□□ 0.05
PTCD1-205ENST00000485746 SLF2Q8IX21 1173 aa15.37■□□□□ 0.05
PTCD1-205ENST00000485746 CCDC102AQ96A19 550 aa15.37■□□□□ 0.05
PTCD1-205ENST00000485746 UBE2Q2LH0YL09 131 aa15.36■□□□□ 0.05
PTCD1-205ENST00000485746 AOC2O75106 756 aa15.36■□□□□ 0.05
PTCD1-205ENST00000485746 PRDX5P30044 214 aa15.36■□□□□ 0.05
PTCD1-205ENST00000485746 RRP1P56182 461 aaKnown RBP15.36■□□□□ 0.05
PTCD1-205ENST00000485746 MAP2K1Q02750 393 aaPredicted RBP15.36■□□□□ 0.05
PTCD1-205ENST00000485746 RASA3Q14644 834 aa15.36■□□□□ 0.05
PTCD1-205ENST00000485746 HHIPL2Q6UWX4 724 aa15.36■□□□□ 0.05
PTCD1-205ENST00000485746 SPATA5Q8NB90 893 aa15.36■□□□□ 0.05
PTCD1-205ENST00000485746 ZDHHC15Q96MV8 337 aa15.36■□□□□ 0.05
PTCD1-205ENST00000485746 CCDC8Q9H0W5 538 aaPredicted RBP15.36■□□□□ 0.05
PTCD1-205ENST00000485746 PPP1R12BO60237 982 aaPredicted RBP15.35■□□□□ 0.05
PTCD1-205ENST00000485746 DIXDC1Q155Q3 683 aa15.35■□□□□ 0.05
PTCD1-205ENST00000485746 MOB2Q70IA6 237 aa15.35■□□□□ 0.05
PTCD1-205ENST00000485746 AACSQ86V21 672 aa15.35■□□□□ 0.05
PTCD1-205ENST00000485746 DBNDD2Q9BQY9 259 aa15.35■□□□□ 0.05
PTCD1-205ENST00000485746 HMG20BQ9P0W2 317 aa15.35■□□□□ 0.05
PTCD1-205ENST00000485746 AOX1Q06278 1338 aa15.35■□□□□ 0.05
PTCD1-205ENST00000485746 SALL1Q9NSC2 1324 aa15.35■□□□□ 0.05
PTCD1-205ENST00000485746 CEP350Q5VT06 3117 aa15.34■□□□□ 0.05
PTCD1-205ENST00000485746 RAB11FIP3O75154 756 aa15.34■□□□□ 0.05
PTCD1-205ENST00000485746 ARID4AP29374 1257 aaPredicted RBP15.34■□□□□ 0.05
PTCD1-205ENST00000485746 MAP2K2P36507 400 aa15.34■□□□□ 0.05
PTCD1-205ENST00000485746 APOBEC3HQ6NTF7 200 aaKnown RBP15.34■□□□□ 0.05
PTCD1-205ENST00000485746 KIF1BPQ96EK5 621 aa15.34■□□□□ 0.05
PTCD1-205ENST00000485746 RAI14Q9P0K7 980 aa15.34■□□□□ 0.05
PTCD1-205ENST00000485746 LRP2BPQ9P2M1 347 aa15.34■□□□□ 0.05
PTCD1-205ENST00000485746 ANGEL1Q9UNK9 670 aaKnown RBP15.34■□□□□ 0.05
PTCD1-205ENST00000485746 PDS5AQ29RF7 1337 aaKnown RBP15.34■□□□□ 0.05
PTCD1-205ENST00000485746 TRPM7Q96QT4 1865 aa15.33■□□□□ 0.05
PTCD1-205ENST00000485746 CACNB3P54284 484 aa15.33■□□□□ 0.04
PTCD1-205ENST00000485746 GSTO1P78417 241 aa15.33■□□□□ 0.04
PTCD1-205ENST00000485746 NOGQ13253 232 aa15.33■□□□□ 0.04
PTCD1-205ENST00000485746 NBPF12Q5TAG4 269 aaPredicted RBP15.33■□□□□ 0.04
PTCD1-205ENST00000485746 CLASRPQ8N2M8 674 aaKnown RBP15.33■□□□□ 0.04
PTCD1-205ENST00000485746 RHPN1Q8TCX5 695 aa15.33■□□□□ 0.04
PTCD1-205ENST00000485746 IL1RAPL2Q9NP60 686 aa15.33■□□□□ 0.04
PTCD1-205ENST00000485746 SNRKQ9NRH2 765 aa15.33■□□□□ 0.04
PTCD1-205ENST00000485746 USP40Q9NVE5 1235 aa15.33■□□□□ 0.04
PTCD1-205ENST00000485746 DAGLAQ9Y4D2 1042 aa15.33■□□□□ 0.04
PTCD1-205ENST00000485746 COL1A1P02452 1464 aaPredicted RBP15.33■□□□□ 0.04
PTCD1-205ENST00000485746 ZNF646O15015 1829 aaPredicted RBP15.32■□□□□ 0.04
PTCD1-205ENST00000485746 ZBTB22O15209 634 aa15.32■□□□□ 0.04
PTCD1-205ENST00000485746 LDHCP07864 332 aa15.32■□□□□ 0.04
PTCD1-205ENST00000485746 IFIT2P09913 472 aaKnown RBP15.32■□□□□ 0.04
PTCD1-205ENST00000485746 MCAMP43121 646 aa15.32■□□□□ 0.04
PTCD1-205ENST00000485746 PI16Q6UXB8 463 aa15.32■□□□□ 0.04
PTCD1-205ENST00000485746 TBC1D9Q6ZT07 1266 aa15.32■□□□□ 0.04
PTCD1-205ENST00000485746 SIRT2Q8IXJ6 389 aa15.32■□□□□ 0.04
PTCD1-205ENST00000485746 EAF2Q96CJ1 260 aaPredicted RBP15.32■□□□□ 0.04
PTCD1-205ENST00000485746 TMEM39BQ9GZU3 492 aa15.32■□□□□ 0.04
PTCD1-205ENST00000485746 IREB2P48200 963 aaKnown RBP15.31■□□□□ 0.04
PTCD1-205ENST00000485746 SLC10A4Q96EP9 437 aa15.31■□□□□ 0.04
PTCD1-205ENST00000485746 NOL10Q9BSC4 688 aaKnown RBP15.31■□□□□ 0.04
PTCD1-205ENST00000485746 WBP1LQ9NX94 342 aa15.31■□□□□ 0.04
PTCD1-205ENST00000485746 TLR7Q9NYK1 1049 aaKnown RBP15.31■□□□□ 0.04
PTCD1-205ENST00000485746 DBNLQ9UJU6 430 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms