RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 HDLBPQ00341 1268 aaKnown RBP19.18■□□□□ 0.66
APOE-205ENST00000485628 MECOMQ03112 1051 aa19.18■□□□□ 0.66
APOE-205ENST00000485628 MAP3K12Q12852 859 aa19.18■□□□□ 0.66
APOE-205ENST00000485628 GPC2Q8N158 579 aa19.18■□□□□ 0.66
APOE-205ENST00000485628 RILPL2Q969X0 211 aa19.18■□□□□ 0.66
APOE-205ENST00000485628 LRP2BPQ9P2M1 347 aa19.18■□□□□ 0.66
APOE-205ENST00000485628 ABCF2Q9UG63 623 aa19.18■□□□□ 0.66
APOE-205ENST00000485628 RNF113AO15541 343 aaKnown RBP19.17■□□□□ 0.66
APOE-205ENST00000485628 ZFYP08048 801 aaPredicted RBP19.17■□□□□ 0.66
APOE-205ENST00000485628 ZMYM1Q5SVZ6 1142 aa19.17■□□□□ 0.66
APOE-205ENST00000485628 GAKO14976 1311 aa19.17■□□□□ 0.66
APOE-205ENST00000485628 MYH2Q9UKX2 1941 aa19.17■□□□□ 0.66
APOE-205ENST00000485628 IDH1O75874 414 aaKnown RBP19.16■□□□□ 0.66
APOE-205ENST00000485628 SLFNL1Q499Z3 407 aa19.16■□□□□ 0.66
APOE-205ENST00000485628 SLC9C2Q5TAH2 1124 aa19.16■□□□□ 0.66
APOE-205ENST00000485628 FSD1Q9BTV5 496 aa19.16■□□□□ 0.66
APOE-205ENST00000485628 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.16■□□□□ 0.66
APOE-205ENST00000485628 ZBTB12Q9Y330 459 aaPredicted RBP19.16■□□□□ 0.66
APOE-205ENST00000485628 ZNF280AP59817 542 aaPredicted RBP19.15■□□□□ 0.66
APOE-205ENST00000485628 HHIPL2Q6UWX4 724 aa19.15■□□□□ 0.66
APOE-205ENST00000485628 ADGRA1Q86SQ6 560 aa19.15■□□□□ 0.66
APOE-205ENST00000485628 ZBED3Q96IU2 234 aaPredicted RBP19.15■□□□□ 0.66
APOE-205ENST00000485628 L3MBTL3Q96JM7 780 aaPredicted RBP19.15■□□□□ 0.66
APOE-205ENST00000485628 HIP1O00291 1037 aa19.14■□□□□ 0.65
APOE-205ENST00000485628 LRRFIP1Q32MZ4 808 aaKnown RBP19.14■□□□□ 0.65
APOE-205ENST00000485628 ZSCAN25Q6NSZ9 544 aa19.14■□□□□ 0.65
APOE-205ENST00000485628 MAGEB6Q8N7X4 407 aa19.14■□□□□ 0.65
APOE-205ENST00000485628 MTMR14Q8NCE2 650 aa19.14■□□□□ 0.65
APOE-205ENST00000485628 OSBP2Q969R2 916 aa19.14■□□□□ 0.65
APOE-205ENST00000485628 IL25Q9H293 177 aa19.14■□□□□ 0.65
APOE-205ENST00000485628 SERPINA10Q9UK55 444 aa19.14■□□□□ 0.65
APOE-205ENST00000485628 TTF2Q9UNY4 1162 aaKnown RBP19.14■□□□□ 0.65
APOE-205ENST00000485628 MAST3O60307 1309 aa19.14■□□□□ 0.65
APOE-205ENST00000485628 ZNF532Q9HCE3 1301 aa19.14■□□□□ 0.65
APOE-205ENST00000485628 GPR75-ASB3A0A0A6YYF3 556 aa19.13■□□□□ 0.65
APOE-205ENST00000485628 GLTPD2A6NH11 291 aa19.13■□□□□ 0.65
APOE-205ENST00000485628 SCNN1DP51172 638 aa19.13■□□□□ 0.65
APOE-205ENST00000485628 PPP4CP60510 307 aa19.13■□□□□ 0.65
APOE-205ENST00000485628 C8orf34Q49A92 452 aa19.13■□□□□ 0.65
APOE-205ENST00000485628 KIAA0825Q8IV33 1275 aa19.13■□□□□ 0.65
APOE-205ENST00000485628 APPBP2Q92624 585 aa19.13■□□□□ 0.65
APOE-205ENST00000485628 FBXW7Q969H0 707 aa19.13■□□□□ 0.65
APOE-205ENST00000485628 FAM227BQ96M60 508 aa19.13■□□□□ 0.65
APOE-205ENST00000485628 HELLSQ9NRZ9 838 aa19.13■□□□□ 0.65
APOE-205ENST00000485628 RAI14Q9P0K7 980 aa19.13■□□□□ 0.65
APOE-205ENST00000485628 ADAMTSL1Q8N6G6 1762 aa19.12■□□□□ 0.65
APOE-205ENST00000485628 WDR90Q96KV7 1748 aa19.12■□□□□ 0.65
APOE-205ENST00000485628 MROH7-TTC4A0A0A0MT08 1334 aa19.12■□□□□ 0.65
APOE-205ENST00000485628 A0A0D9SFI3 127 aa19.12■□□□□ 0.65
APOE-205ENST00000485628 CDC45O75419 566 aa19.12■□□□□ 0.65
APOE-205ENST00000485628 DDNO94850 711 aaPredicted RBP19.12■□□□□ 0.65
APOE-205ENST00000485628 GMPSP49915 693 aaPredicted RBP19.12■□□□□ 0.65
APOE-205ENST00000485628 DIXDC1Q155Q3 683 aa19.12■□□□□ 0.65
APOE-205ENST00000485628 NAA16Q6N069 864 aaPredicted RBP19.12■□□□□ 0.65
APOE-205ENST00000485628 ZDHHC15Q96MV8 337 aa19.12■□□□□ 0.65
APOE-205ENST00000485628 RIOK1Q9BRS2 568 aaKnown RBP19.12■□□□□ 0.65
APOE-205ENST00000485628 PUS7LQ9H0K6 701 aaKnown RBP19.12■□□□□ 0.65
APOE-205ENST00000485628 DCAF8L1A6NGE4 600 aa19.11■□□□□ 0.65
APOE-205ENST00000485628 USP17L8P0C7I0 530 aa19.11■□□□□ 0.65
APOE-205ENST00000485628 CYP7A1P22680 504 aa19.11■□□□□ 0.65
APOE-205ENST00000485628 CRKP46108 304 aa19.11■□□□□ 0.65
APOE-205ENST00000485628 GSTO1P78417 241 aa19.11■□□□□ 0.65
APOE-205ENST00000485628 NMIQ13287 307 aaPredicted RBP19.11■□□□□ 0.65
APOE-205ENST00000485628 APOBEC3HQ6NTF7 200 aaKnown RBP19.11■□□□□ 0.65
APOE-205ENST00000485628 DZIP1Q86YF9 867 aaKnown RBP19.11■□□□□ 0.65
APOE-205ENST00000485628 GPRC5DQ9NZD1 345 aa19.11■□□□□ 0.65
APOE-205ENST00000485628 DAGLAQ9Y4D2 1042 aa19.11■□□□□ 0.65
APOE-205ENST00000485628 SHTN1A0MZ66 631 aa19.1■□□□□ 0.65
APOE-205ENST00000485628 SGSM2O43147 1006 aa19.1■□□□□ 0.65
APOE-205ENST00000485628 LDHCP07864 332 aa19.1■□□□□ 0.65
APOE-205ENST00000485628 RHBDL3P58872 404 aa19.1■□□□□ 0.65
APOE-205ENST00000485628 SLF2Q8IX21 1173 aa19.1■□□□□ 0.65
APOE-205ENST00000485628 SEC62Q99442 399 aaKnown RBP19.1■□□□□ 0.65
APOE-205ENST00000485628 CNOT7Q9UIV1 285 aaKnown RBP19.1■□□□□ 0.65
APOE-205ENST00000485628 RAD50Q92878 1312 aa19.09■□□□□ 0.65
APOE-205ENST00000485628 POTECB2RU33 542 aa19.09■□□□□ 0.65
APOE-205ENST00000485628 MCMDC2Q4G0Z9 681 aa19.09■□□□□ 0.65
APOE-205ENST00000485628 DPY19L2Q6NUT2 758 aa19.09■□□□□ 0.65
APOE-205ENST00000485628 TEKT1Q969V4 418 aa19.09■□□□□ 0.65
APOE-205ENST00000485628 ESYT1Q9BSJ8 1104 aa19.09■□□□□ 0.65
APOE-205ENST00000485628 PCDHAC2Q9Y5I4 1007 aa19.09■□□□□ 0.65
APOE-205ENST00000485628 GJA3Q9Y6H8 435 aa19.09■□□□□ 0.65
APOE-205ENST00000485628 CDK5RAP2Q96SN8 1893 aa19.08■□□□□ 0.65
APOE-205ENST00000485628 F8W031 263 aaPredicted RBP19.08■□□□□ 0.64
APOE-205ENST00000485628 M0R2C6 588 aa19.08■□□□□ 0.64
APOE-205ENST00000485628 FOXP2O15409 715 aa19.08■□□□□ 0.64
APOE-205ENST00000485628 CWC27Q6UX04 472 aaKnown RBP19.08■□□□□ 0.64
APOE-205ENST00000485628 ZNF589Q86UQ0 364 aaPredicted RBP19.08■□□□□ 0.64
APOE-205ENST00000485628 STRBPQ96SI9 672 aaKnown RBP19.08■□□□□ 0.64
APOE-205ENST00000485628 DIAPH3Q9NSV4 1193 aa19.08■□□□□ 0.64
APOE-205ENST00000485628 SCN4AP35499 1836 aa19.08■□□□□ 0.64
APOE-205ENST00000485628 SPDYE2BA6NHP3 402 aa19.07■□□□□ 0.64
APOE-205ENST00000485628 SPDYE6P0CI01 402 aa19.07■□□□□ 0.64
APOE-205ENST00000485628 CFAP100Q494V2 611 aa19.07■□□□□ 0.64
APOE-205ENST00000485628 MICALL2Q8IY33 904 aa19.07■□□□□ 0.64
APOE-205ENST00000485628 OGFOD1Q8N543 542 aa19.07■□□□□ 0.64
APOE-205ENST00000485628 PRMT6Q96LA8 375 aaPredicted RBP19.07■□□□□ 0.64
APOE-205ENST00000485628 HDAC9Q9UKV0 1011 aa19.07■□□□□ 0.64
APOE-205ENST00000485628 FOCADQ5VW36 1801 aa19.07■□□□□ 0.64
APOE-205ENST00000485628 ECM29Q5VYK3 1845 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms