RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 MROH5Q6ZUA9 1318 aa17.34■□□□□ 0.37
SMARCD3-211ENST00000485592 FAM84BQ96KN1 310 aaPredicted RBP17.34■□□□□ 0.37
SMARCD3-211ENST00000485592 PTPN18Q99952 460 aa17.34■□□□□ 0.37
SMARCD3-211ENST00000485592 POTEFA5A3E0 1075 aa17.33■□□□□ 0.36
SMARCD3-211ENST00000485592 ANP32CO43423 234 aa17.33■□□□□ 0.36
SMARCD3-211ENST00000485592 ARHGEF6Q15052 776 aa17.33■□□□□ 0.36
SMARCD3-211ENST00000485592 SUCLG2Q96I99 432 aa17.33■□□□□ 0.36
SMARCD3-211ENST00000485592 PUS3Q9BZE2 481 aaKnown RBP17.33■□□□□ 0.36
SMARCD3-211ENST00000485592 CSADQ9Y600 493 aa17.33■□□□□ 0.36
SMARCD3-211ENST00000485592 FRAT2O75474 233 aaPredicted RBP17.32■□□□□ 0.36
SMARCD3-211ENST00000485592 GTF2A2P52657 109 aa17.32■□□□□ 0.36
SMARCD3-211ENST00000485592 CAVIN4Q5BKX8 364 aa17.32■□□□□ 0.36
SMARCD3-211ENST00000485592 TBC1D22AQ8WUA7 517 aa17.32■□□□□ 0.36
SMARCD3-211ENST00000485592 ARMC5Q96C12 935 aa17.32■□□□□ 0.36
SMARCD3-211ENST00000485592 MS4A4AQ96JQ5 239 aa17.32■□□□□ 0.36
SMARCD3-211ENST00000485592 TEPSINQ96N21 525 aa17.32■□□□□ 0.36
SMARCD3-211ENST00000485592 TMEM39BQ9GZU3 492 aa17.32■□□□□ 0.36
SMARCD3-211ENST00000485592 ZFYVE28Q9HCC9 887 aa17.32■□□□□ 0.36
SMARCD3-211ENST00000485592 SPINK5Q9NQ38 1064 aaPredicted RBP17.32■□□□□ 0.36
SMARCD3-211ENST00000485592 CCL15-CCL14A0A0B4J2E2 113 aa17.31■□□□□ 0.36
SMARCD3-211ENST00000485592 WDHD1O75717 1129 aaPredicted RBP17.31■□□□□ 0.36
SMARCD3-211ENST00000485592 MAP3K9P80192 1104 aa17.31■□□□□ 0.36
SMARCD3-211ENST00000485592 CHAF1AQ13111 956 aaPredicted RBP17.31■□□□□ 0.36
SMARCD3-211ENST00000485592 VGLL4Q14135 290 aa17.31■□□□□ 0.36
SMARCD3-211ENST00000485592 TAF1CQ15572 869 aaPredicted RBP17.31■□□□□ 0.36
SMARCD3-211ENST00000485592 CCL15Q16663 113 aa17.31■□□□□ 0.36
SMARCD3-211ENST00000485592 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.31■□□□□ 0.36
SMARCD3-211ENST00000485592 TMOD2Q9NZR1 351 aa17.31■□□□□ 0.36
SMARCD3-211ENST00000485592 RIPOR2Q9Y4F9 1068 aa17.31■□□□□ 0.36
SMARCD3-211ENST00000485592 HDLBPQ00341 1268 aaKnown RBP17.3■□□□□ 0.36
SMARCD3-211ENST00000485592 METTL24Q5JXM2 366 aa17.3■□□□□ 0.36
SMARCD3-211ENST00000485592 CDAN1Q8IWY9 1227 aa17.3■□□□□ 0.36
SMARCD3-211ENST00000485592 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.3■□□□□ 0.36
SMARCD3-211ENST00000485592 BRI3BPQ8WY22 251 aa17.3■□□□□ 0.36
SMARCD3-211ENST00000485592 TEKT1Q969V4 418 aa17.3■□□□□ 0.36
SMARCD3-211ENST00000485592 OTUD5Q96G74 571 aa17.3■□□□□ 0.36
SMARCD3-211ENST00000485592 IQSEC3Q9UPP2 1182 aaPredicted RBP17.3■□□□□ 0.36
SMARCD3-211ENST00000485592 UTYO14607 1347 aa17.29■□□□□ 0.36
SMARCD3-211ENST00000485592 NBPF7P0C2Y1 421 aaPredicted RBP17.29■□□□□ 0.36
SMARCD3-211ENST00000485592 FBXO33Q7Z6M2 555 aa17.29■□□□□ 0.36
SMARCD3-211ENST00000485592 CNKSR2Q8WXI2 1034 aa17.29■□□□□ 0.36
SMARCD3-211ENST00000485592 HOOK2Q96ED9 719 aa17.29■□□□□ 0.36
SMARCD3-211ENST00000485592 KAZALD1Q96I82 304 aa17.29■□□□□ 0.36
SMARCD3-211ENST00000485592 TMEM106CQ9BVX2 250 aa17.29■□□□□ 0.36
SMARCD3-211ENST00000485592 BICC1Q9H694 974 aaKnown RBP17.29■□□□□ 0.36
SMARCD3-211ENST00000485592 MAST3O60307 1309 aa17.28■□□□□ 0.36
SMARCD3-211ENST00000485592 SLC9C1Q4G0N8 1177 aa17.28■□□□□ 0.36
SMARCD3-211ENST00000485592 NBPF11Q86T75 865 aa17.28■□□□□ 0.36
SMARCD3-211ENST00000485592 MYH13Q9UKX3 1938 aa17.27■□□□□ 0.36
SMARCD3-211ENST00000485592 HTTP42858 3142 aa17.27■□□□□ 0.36
SMARCD3-211ENST00000485592 SPDYE5A6NIY4 337 aa17.27■□□□□ 0.36
SMARCD3-211ENST00000485592 GRIK5Q16478 980 aa17.27■□□□□ 0.36
SMARCD3-211ENST00000485592 RABL6Q3YEC7 729 aaPredicted RBP17.27■□□□□ 0.36
SMARCD3-211ENST00000485592 LRRC24Q50LG9 513 aa17.27■□□□□ 0.36
SMARCD3-211ENST00000485592 FAM43AQ8N2R8 423 aa17.27■□□□□ 0.36
SMARCD3-211ENST00000485592 PDE8BO95263 885 aa17.26■□□□□ 0.35
SMARCD3-211ENST00000485592 CETPP11597 493 aa17.26■□□□□ 0.35
SMARCD3-211ENST00000485592 EN2P19622 333 aaPredicted RBP17.26■□□□□ 0.35
SMARCD3-211ENST00000485592 CACNB3P54284 484 aa17.26■□□□□ 0.35
SMARCD3-211ENST00000485592 KIF22Q14807 665 aa17.26■□□□□ 0.35
SMARCD3-211ENST00000485592 FAM83AQ86UY5 434 aa17.26■□□□□ 0.35
SMARCD3-211ENST00000485592 ERO1BQ86YB8 467 aa17.26■□□□□ 0.35
SMARCD3-211ENST00000485592 ZNF333Q96JL9 665 aa17.26■□□□□ 0.35
SMARCD3-211ENST00000485592 ZDHHC15Q96MV8 337 aa17.26■□□□□ 0.35
SMARCD3-211ENST00000485592 WRNIP1Q96S55 665 aa17.26■□□□□ 0.35
SMARCD3-211ENST00000485592 SUGT1Q9Y2Z0 365 aa17.26■□□□□ 0.35
SMARCD3-211ENST00000485592 PTCH2Q9Y6C5 1203 aa17.26■□□□□ 0.35
SMARCD3-211ENST00000485592 CAP1Q01518 475 aa17.25■□□□□ 0.35
SMARCD3-211ENST00000485592 DCAF15Q66K64 600 aa17.25■□□□□ 0.35
SMARCD3-211ENST00000485592 FAM9BQ8IZU0 186 aa17.25■□□□□ 0.35
SMARCD3-211ENST00000485592 MRIQ9BWK5 157 aa17.25■□□□□ 0.35
SMARCD3-211ENST00000485592 ZCCHC17Q9NP64 241 aaKnown RBP17.25■□□□□ 0.35
SMARCD3-211ENST00000485592 SNCAIPQ9Y6H5 919 aa17.25■□□□□ 0.35
SMARCD3-211ENST00000485592 RPAP1Q9BWH6 1393 aaPredicted RBP17.25■□□□□ 0.35
SMARCD3-211ENST00000485592 KIF16BQ96L93 1317 aa17.24■□□□□ 0.35
SMARCD3-211ENST00000485592 TLR2O60603 784 aa17.24■□□□□ 0.35
SMARCD3-211ENST00000485592 IFIT1P09914 478 aaKnown RBP17.24■□□□□ 0.35
SMARCD3-211ENST00000485592 BCAMP50895 628 aa17.24■□□□□ 0.35
SMARCD3-211ENST00000485592 SNAPC2Q13487 334 aa17.24■□□□□ 0.35
SMARCD3-211ENST00000485592 SLC4A8Q2Y0W8 1093 aa17.24■□□□□ 0.35
SMARCD3-211ENST00000485592 HABP4Q5JVS0 413 aaKnown RBP17.24■□□□□ 0.35
SMARCD3-211ENST00000485592 FKBP1CQ5VVH2 108 aa17.24■□□□□ 0.35
SMARCD3-211ENST00000485592 ANKRD44Q8N8A2 993 aa17.24■□□□□ 0.35
SMARCD3-211ENST00000485592 VGLL2Q8N8G2 317 aa17.24■□□□□ 0.35
SMARCD3-211ENST00000485592 PTPRCP08575 1304 aa17.23■□□□□ 0.35
SMARCD3-211ENST00000485592 PUM3Q15397 648 aaKnown RBP17.23■□□□□ 0.35
SMARCD3-211ENST00000485592 ZKSCAN4Q969J2 545 aaPredicted RBP17.23■□□□□ 0.35
SMARCD3-211ENST00000485592 BTBD19C9JJ37 291 aa17.22■□□□□ 0.35
SMARCD3-211ENST00000485592 IRF6O14896 467 aa17.22■□□□□ 0.35
SMARCD3-211ENST00000485592 PPIL2Q13356 520 aa17.22■□□□□ 0.35
SMARCD3-211ENST00000485592 APOBEC3HQ6NTF7 200 aaKnown RBP17.22■□□□□ 0.35
SMARCD3-211ENST00000485592 HHIPL2Q6UWX4 724 aa17.22■□□□□ 0.35
SMARCD3-211ENST00000485592 KLHDC4Q8TBB5 520 aa17.22■□□□□ 0.35
SMARCD3-211ENST00000485592 ZNF341Q9BYN7 854 aa17.22■□□□□ 0.35
SMARCD3-211ENST00000485592 KIAA0100Q14667 2235 aaKnown RBP17.22■□□□□ 0.35
SMARCD3-211ENST00000485592 ZSWIM8A7E2V4 1837 aa17.21■□□□□ 0.35
SMARCD3-211ENST00000485592 CENPFP49454 3210 aa17.21■□□□□ 0.35
SMARCD3-211ENST00000485592 GNRH1P01148 92 aa17.21■□□□□ 0.35
SMARCD3-211ENST00000485592 SLC5A1P13866 664 aa17.21■□□□□ 0.35
SMARCD3-211ENST00000485592 LACTBP83111 547 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms