RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 SHTN1A0MZ66 631 aa15.01□□□□□ -0.01
TRA2B-213ENST00000485530 ZBTB22O15209 634 aa15.01□□□□□ -0.01
TRA2B-213ENST00000485530 GMPSP49915 693 aaPredicted RBP15.01□□□□□ -0.01
TRA2B-213ENST00000485530 HIRAP54198 1017 aaPredicted RBP15.01□□□□□ -0.01
TRA2B-213ENST00000485530 RASGRF1Q13972 1273 aa15.01□□□□□ -0.01
TRA2B-213ENST00000485530 STRIP1Q5VSL9 837 aa15.01□□□□□ -0.01
TRA2B-213ENST00000485530 PRPF38BQ5VTL8 546 aaKnown RBP15.01□□□□□ -0.01
TRA2B-213ENST00000485530 VPS37DQ86XT2 251 aa15.01□□□□□ -0.01
TRA2B-213ENST00000485530 HMG20BQ9P0W2 317 aa15.01□□□□□ -0.01
TRA2B-213ENST00000485530 COL1A1P02452 1464 aaPredicted RBP15.01□□□□□ -0.01
TRA2B-213ENST00000485530 SALL3Q9BXA9 1300 aa15□□□□□ -0.01
TRA2B-213ENST00000485530 IFIT2P09913 472 aaKnown RBP15□□□□□ -0.01
TRA2B-213ENST00000485530 ARID4AP29374 1257 aaPredicted RBP15□□□□□ -0.01
TRA2B-213ENST00000485530 MCAMP43121 646 aa15□□□□□ -0.01
TRA2B-213ENST00000485530 TNIP1Q15025 636 aa15□□□□□ -0.01
TRA2B-213ENST00000485530 GORABQ5T7V8 394 aa15□□□□□ -0.01
TRA2B-213ENST00000485530 CHD1LQ86WJ1 897 aa15□□□□□ -0.01
TRA2B-213ENST00000485530 TRPM4Q8TD43 1214 aa15□□□□□ -0.01
TRA2B-213ENST00000485530 ZC3H15Q8WU90 426 aaKnown RBP15□□□□□ -0.01
TRA2B-213ENST00000485530 ZNF512BQ96KM6 892 aaPredicted RBP15□□□□□ -0.01
TRA2B-213ENST00000485530 LNPKQ9C0E8 428 aa15□□□□□ -0.01
TRA2B-213ENST00000485530 SNRKQ9NRH2 765 aa15□□□□□ -0.01
TRA2B-213ENST00000485530 NDUFB9Q9Y6M9 179 aa15□□□□□ -0.01
TRA2B-213ENST00000485530 PDE4AP27815 886 aa14.99□□□□□ -0.01
TRA2B-213ENST00000485530 CHAF1AQ13111 956 aaPredicted RBP14.99□□□□□ -0.01
TRA2B-213ENST00000485530 ERICH6BQ5W0A0 696 aa14.99□□□□□ -0.01
TRA2B-213ENST00000485530 TSHZ3Q63HK5 1081 aa14.99□□□□□ -0.01
TRA2B-213ENST00000485530 RSBN1LQ6PCB5 846 aaPredicted RBP14.99□□□□□ -0.01
TRA2B-213ENST00000485530 SAGE1Q9NXZ1 904 aa14.99□□□□□ -0.01
TRA2B-213ENST00000485530 HUNKP57058 714 aa14.98□□□□□ -0.01
TRA2B-213ENST00000485530 CCDC158Q5M9N0 1113 aa14.98□□□□□ -0.01
TRA2B-213ENST00000485530 TBC1D9Q6ZT07 1266 aa14.98□□□□□ -0.01
TRA2B-213ENST00000485530 CDC37L1Q7L3B6 337 aa14.98□□□□□ -0.01
TRA2B-213ENST00000485530 SKAP1Q86WV1 359 aa14.98□□□□□ -0.01
TRA2B-213ENST00000485530 FBXW7Q969H0 707 aa14.98□□□□□ -0.01
TRA2B-213ENST00000485530 GNL3LQ9NVN8 582 aaKnown RBP14.98□□□□□ -0.01
TRA2B-213ENST00000485530 PPP4R2Q9NY27 417 aa14.98□□□□□ -0.01
TRA2B-213ENST00000485530 FAM155AB1AL88 458 aaPredicted RBP14.97□□□□□ -0.01
TRA2B-213ENST00000485530 FRAT2O75474 233 aaPredicted RBP14.97□□□□□ -0.01
TRA2B-213ENST00000485530 ATP5JP18859 108 aa14.97□□□□□ -0.01
TRA2B-213ENST00000485530 ZAP70P43403 619 aa14.97□□□□□ -0.01
TRA2B-213ENST00000485530 TTC39AQ5SRH9 613 aa14.97□□□□□ -0.01
TRA2B-213ENST00000485530 SPATA5Q8NB90 893 aa14.97□□□□□ -0.01
TRA2B-213ENST00000485530 CCDC136Q96JN2 1154 aa14.97□□□□□ -0.01
TRA2B-213ENST00000485530 DENND2AQ9ULE3 1009 aa14.97□□□□□ -0.01
TRA2B-213ENST00000485530 SEMA3EO15041 775 aa14.96□□□□□ -0.01
TRA2B-213ENST00000485530 EGFRP00533 1210 aa14.96□□□□□ -0.01
TRA2B-213ENST00000485530 CYP2E1P05181 493 aaPredicted RBP14.96□□□□□ -0.01
TRA2B-213ENST00000485530 UQCRFS1P1P0C7P4 283 aa14.96□□□□□ -0.01
TRA2B-213ENST00000485530 MFSD14BQ5SR56 506 aa14.96□□□□□ -0.01
TRA2B-213ENST00000485530 DLK2Q6UY11 383 aa14.96□□□□□ -0.01
TRA2B-213ENST00000485530 ARAP2Q8WZ64 1704 aa14.96□□□□□ -0.01
TRA2B-213ENST00000485530 DPF2Q92785 391 aa14.96□□□□□ -0.01
TRA2B-213ENST00000485530 EDC3Q96F86 508 aaKnown RBP14.96□□□□□ -0.01
TRA2B-213ENST00000485530 ANTXR1Q9H6X2 564 aa14.96□□□□□ -0.01
TRA2B-213ENST00000485530 STAP2Q9UGK3 403 aa14.96□□□□□ -0.01
TRA2B-213ENST00000485530 CNOT7Q9UIV1 285 aaKnown RBP14.96□□□□□ -0.01
TRA2B-213ENST00000485530 ZNF646O15015 1829 aaPredicted RBP14.96□□□□□ -0.01
TRA2B-213ENST00000485530 FKBP1AP62942 108 aaKnown RBP14.95□□□□□ -0.02
TRA2B-213ENST00000485530 RGMBQ6NW40 437 aa14.95□□□□□ -0.02
TRA2B-213ENST00000485530 USP48Q86UV5 1035 aa14.95□□□□□ -0.02
TRA2B-213ENST00000485530 KIAA0825Q8IV33 1275 aa14.95□□□□□ -0.02
TRA2B-213ENST00000485530 PLEKHM2Q8IWE5 1019 aa14.95□□□□□ -0.02
TRA2B-213ENST00000485530 AGBL3Q8NEM8 1001 aa14.95□□□□□ -0.02
TRA2B-213ENST00000485530 PI4K2BQ8TCG2 481 aa14.95□□□□□ -0.02
TRA2B-213ENST00000485530 ZNF384Q8TF68 577 aa14.95□□□□□ -0.02
TRA2B-213ENST00000485530 BOLA2Q9H3K6 86 aa14.95□□□□□ -0.02
TRA2B-213ENST00000485530 ECHDC1Q9NTX5 307 aa14.95□□□□□ -0.02
TRA2B-213ENST00000485530 PCDHAC2Q9Y5I4 1007 aa14.95□□□□□ -0.02
TRA2B-213ENST00000485530 PDS5AQ29RF7 1337 aaKnown RBP14.94□□□□□ -0.02
TRA2B-213ENST00000485530 F8W031 263 aaPredicted RBP14.94□□□□□ -0.02
TRA2B-213ENST00000485530 RPS12P25398 132 aaKnown RBP14.94□□□□□ -0.02
TRA2B-213ENST00000485530 PRDX5P30044 214 aa14.94□□□□□ -0.02
TRA2B-213ENST00000485530 PDE1AP54750 535 aa14.94□□□□□ -0.02
TRA2B-213ENST00000485530 ZNF280AP59817 542 aaPredicted RBP14.94□□□□□ -0.02
TRA2B-213ENST00000485530 CENPQQ7L2Z9 268 aaPredicted RBP14.94□□□□□ -0.02
TRA2B-213ENST00000485530 WDR66Q8TBY9 1149 aa14.94□□□□□ -0.02
TRA2B-213ENST00000485530 PIH1D3Q9NQM4 214 aaKnown RBP14.94□□□□□ -0.02
TRA2B-213ENST00000485530 SALL1Q9NSC2 1324 aa14.93□□□□□ -0.02
TRA2B-213ENST00000485530 USP17L8P0C7I0 530 aa14.93□□□□□ -0.02
TRA2B-213ENST00000485530 MX1P20591 662 aa14.93□□□□□ -0.02
TRA2B-213ENST00000485530 KIF23Q02241 960 aaPredicted RBP14.93□□□□□ -0.02
TRA2B-213ENST00000485530 SAMD7Q7Z3H4 446 aa14.93□□□□□ -0.02
TRA2B-213ENST00000485530 MICALL2Q8IY33 904 aa14.93□□□□□ -0.02
TRA2B-213ENST00000485530 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.93□□□□□ -0.02
TRA2B-213ENST00000485530 HAUS7Q99871 368 aa14.93□□□□□ -0.02
TRA2B-213ENST00000485530 RNF186Q9NXI6 227 aa14.93□□□□□ -0.02
TRA2B-213ENST00000485530 AOX1Q06278 1338 aa14.92□□□□□ -0.02
TRA2B-213ENST00000485530 TRPA1O75762 1119 aa14.92□□□□□ -0.02
TRA2B-213ENST00000485530 CTU1Q7Z7A3 348 aaKnown RBP14.92□□□□□ -0.02
TRA2B-213ENST00000485530 TBC1D22AQ8WUA7 517 aa14.92□□□□□ -0.02
TRA2B-213ENST00000485530 GBA2Q9HCG7 927 aaPredicted RBP14.92□□□□□ -0.02
TRA2B-213ENST00000485530 AKAP11Q9UKA4 1901 aa14.92□□□□□ -0.02
TRA2B-213ENST00000485530 H7C1D1 291 aa14.91□□□□□ -0.02
TRA2B-213ENST00000485530 MAP4K4O95819 1239 aaPredicted RBP14.91□□□□□ -0.02
TRA2B-213ENST00000485530 CHGBP05060 677 aa14.91□□□□□ -0.02
TRA2B-213ENST00000485530 RBM26Q5T8P6 1007 aaKnown RBP14.91□□□□□ -0.02
TRA2B-213ENST00000485530 KRT26Q7Z3Y9 468 aa14.91□□□□□ -0.02
TRA2B-213ENST00000485530 CCDC102AQ96A19 550 aa14.91□□□□□ -0.02
TRA2B-213ENST00000485530 ZBED3Q96IU2 234 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms