RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 CTU1Q7Z7A3 348 aaKnown RBP32.13■■■□□ 2.73
HLA-F-227ENST00000485513 CLMNQ96JQ2 1002 aa32.13■■■□□ 2.73
HLA-F-227ENST00000485513 IREB2P48200 963 aaKnown RBP32.12■■■□□ 2.73
HLA-F-227ENST00000485513 HDLBPQ00341 1268 aaKnown RBP32.11■■■□□ 2.73
HLA-F-227ENST00000485513 USP2O75604 605 aaPredicted RBP32.1■■■□□ 2.73
HLA-F-227ENST00000485513 ZBTB48P10074 688 aaPredicted RBP32.1■■■□□ 2.73
HLA-F-227ENST00000485513 SLC5A1P13866 664 aa32.1■■■□□ 2.73
HLA-F-227ENST00000485513 RGS19P49795 217 aa32.1■■■□□ 2.73
HLA-F-227ENST00000485513 ZNF296Q8WUU4 475 aaPredicted RBP32.1■■■□□ 2.73
HLA-F-227ENST00000485513 LPIN2Q92539 896 aa32.1■■■□□ 2.73
HLA-F-227ENST00000485513 WNK4Q96J92 1243 aa32.1■■■□□ 2.73
HLA-F-227ENST00000485513 MANSC4A6NHS7 340 aaPredicted RBP32.09■■■□□ 2.73
HLA-F-227ENST00000485513 TCP10L2B9ZVM9 353 aa32.09■■■□□ 2.73
HLA-F-227ENST00000485513 RARSP54136 660 aaKnown RBP32.09■■■□□ 2.73
HLA-F-227ENST00000485513 ATG9AQ7Z3C6 839 aa32.09■■■□□ 2.73
HLA-F-227ENST00000485513 TEKT1Q969V4 418 aa32.09■■■□□ 2.73
HLA-F-227ENST00000485513 HDAC5Q9UQL6 1122 aa32.09■■■□□ 2.73
HLA-F-227ENST00000485513 TNNI2P48788 182 aa32.08■■■□□ 2.73
HLA-F-227ENST00000485513 INHBEP58166 350 aa32.08■■■□□ 2.73
HLA-F-227ENST00000485513 NOM1Q5C9Z4 860 aaKnown RBP32.08■■■□□ 2.73
HLA-F-227ENST00000485513 SIL1Q9H173 461 aa32.08■■■□□ 2.73
HLA-F-227ENST00000485513 FBXO3Q9UK99 471 aa32.08■■■□□ 2.73
HLA-F-227ENST00000485513 GPR25O00155 361 aa32.07■■■□□ 2.72
HLA-F-227ENST00000485513 ANKRD13AQ8IZ07 590 aa32.07■■■□□ 2.72
HLA-F-227ENST00000485513 CFHR5Q9BXR6 569 aa32.07■■■□□ 2.72
HLA-F-227ENST00000485513 SUGT1Q9Y2Z0 365 aa32.07■■■□□ 2.72
HLA-F-227ENST00000485513 LRRFIP2Q9Y608 721 aaKnown RBP32.07■■■□□ 2.72
HLA-F-227ENST00000485513 MYH13Q9UKX3 1938 aa32.06■■■□□ 2.72
HLA-F-227ENST00000485513 CIAO1O76071 339 aa32.06■■■□□ 2.72
HLA-F-227ENST00000485513 ALDH1A1P00352 501 aa32.06■■■□□ 2.72
HLA-F-227ENST00000485513 TEPSINQ96N21 525 aa32.06■■■□□ 2.72
HLA-F-227ENST00000485513 MAST3O60307 1309 aa32.05■■■□□ 2.72
HLA-F-227ENST00000485513 MLLT1Q03111 559 aaPredicted RBP32.05■■■□□ 2.72
HLA-F-227ENST00000485513 MRIQ9BWK5 157 aa32.05■■■□□ 2.72
HLA-F-227ENST00000485513 TMEM39BQ9GZU3 492 aa32.05■■■□□ 2.72
HLA-F-227ENST00000485513 CEP126Q9P2H0 1117 aa32.05■■■□□ 2.72
HLA-F-227ENST00000485513 LAMB1P07942 1786 aa32.04■■■□□ 2.72
HLA-F-227ENST00000485513 IFNL1Q8IU54 200 aa32.04■■■□□ 2.72
HLA-F-227ENST00000485513 CDAN1Q8IWY9 1227 aa32.04■■■□□ 2.72
HLA-F-227ENST00000485513 ZDHHC15Q96MV8 337 aa32.04■■■□□ 2.72
HLA-F-227ENST00000485513 OTOFQ9HC10 1997 aa32.04■■■□□ 2.72
HLA-F-227ENST00000485513 ATP2B3Q16720 1220 aa32.03■■■□□ 2.72
HLA-F-227ENST00000485513 WDR66Q8TBY9 1149 aa32.03■■■□□ 2.72
HLA-F-227ENST00000485513 ARHGAP45Q92619 1136 aa32.03■■■□□ 2.72
HLA-F-227ENST00000485513 MEIS3Q99687 375 aa32.03■■■□□ 2.72
HLA-F-227ENST00000485513 R3HDMLQ9H3Y0 253 aa32.03■■■□□ 2.72
HLA-F-227ENST00000485513 PKN2Q16513 984 aaKnown RBP32.02■■■□□ 2.72
HLA-F-227ENST00000485513 TMOD2Q9NZR1 351 aa32.02■■■□□ 2.72
HLA-F-227ENST00000485513 GJA5P36382 358 aa32.01■■■□□ 2.71
HLA-F-227ENST00000485513 CACNB3P54284 484 aa32.01■■■□□ 2.71
HLA-F-227ENST00000485513 FKTNO75072 461 aa32■■■□□ 2.71
HLA-F-227ENST00000485513 IL15P40933 162 aaPredicted RBP32■■■□□ 2.71
HLA-F-227ENST00000485513 INTS3Q68E01 1043 aaKnown RBP32■■■□□ 2.71
HLA-F-227ENST00000485513 APOBEC3HQ6NTF7 200 aaKnown RBP32■■■□□ 2.71
HLA-F-227ENST00000485513 ELP3Q9H9T3 547 aa32■■■□□ 2.71
HLA-F-227ENST00000485513 PA2G4Q9UQ80 394 aaKnown RBP32■■■□□ 2.71
HLA-F-227ENST00000485513 IGF2BP3O00425 579 aaKnown RBP eCLIP31.99■■■□□ 2.71
HLA-F-227ENST00000485513 HHIPL2Q6UWX4 724 aa31.99■■■□□ 2.71
HLA-F-227ENST00000485513 OPTNQ96CV9 577 aa31.98■■■□□ 2.71
HLA-F-227ENST00000485513 COPRSQ9NQ92 184 aa31.98■■■□□ 2.71
HLA-F-227ENST00000485513 GNL3LQ9NVN8 582 aaKnown RBP31.98■■■□□ 2.71
HLA-F-227ENST00000485513 GNAI3P08754 354 aa31.97■■■□□ 2.71
HLA-F-227ENST00000485513 FKBP1CQ5VVH2 108 aa31.97■■■□□ 2.71
HLA-F-227ENST00000485513 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.97■■■□□ 2.71
HLA-F-227ENST00000485513 FAM83AQ86UY5 434 aa31.97■■■□□ 2.71
HLA-F-227ENST00000485513 HPS5Q9UPZ3 1129 aa31.97■■■□□ 2.71
HLA-F-227ENST00000485513 MAP3K9P80192 1104 aa31.96■■■□□ 2.71
HLA-F-227ENST00000485513 OTUD7BQ6GQQ9 843 aa31.96■■■□□ 2.71
HLA-F-227ENST00000485513 IPO8O15397 1037 aaKnown RBP31.95■■■□□ 2.71
HLA-F-227ENST00000485513 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.95■■■□□ 2.71
HLA-F-227ENST00000485513 VGLL4Q14135 290 aa31.94■■■□□ 2.7
HLA-F-227ENST00000485513 CSADQ9Y600 493 aa31.94■■■□□ 2.7
HLA-F-227ENST00000485513 TESPA1A2RU30 521 aaPredicted RBP31.93■■■□□ 2.7
HLA-F-227ENST00000485513 PHKA1P46020 1223 aa31.93■■■□□ 2.7
HLA-F-227ENST00000485513 SOX10P56693 466 aa31.93■■■□□ 2.7
HLA-F-227ENST00000485513 HOOK2Q96ED9 719 aa31.93■■■□□ 2.7
HLA-F-227ENST00000485513 SEMA3EO15041 775 aa31.92■■■□□ 2.7
HLA-F-227ENST00000485513 PRDX5P30044 214 aa31.92■■■□□ 2.7
HLA-F-227ENST00000485513 CNKSR2Q8WXI2 1034 aa31.92■■■□□ 2.7
HLA-F-227ENST00000485513 DENND2AQ9ULE3 1009 aa31.92■■■□□ 2.7
HLA-F-227ENST00000485513 SRGAP3O43295 1099 aa31.91■■■□□ 2.7
HLA-F-227ENST00000485513 LDHBP07195 334 aaKnown RBP31.91■■■□□ 2.7
HLA-F-227ENST00000485513 TRIM27P14373 513 aa31.91■■■□□ 2.7
HLA-F-227ENST00000485513 FBXO46Q6PJ61 603 aaPredicted RBP31.91■■■□□ 2.7
HLA-F-227ENST00000485513 PTPN18Q99952 460 aa31.91■■■□□ 2.7
HLA-F-227ENST00000485513 DAGLAQ9Y4D2 1042 aa31.91■■■□□ 2.7
HLA-F-227ENST00000485513 ADORA1P30542 326 aa31.9■■■□□ 2.7
HLA-F-227ENST00000485513 DIXDC1Q155Q3 683 aa31.9■■■□□ 2.7
HLA-F-227ENST00000485513 ATF7IPQ6VMQ6 1270 aa31.9■■■□□ 2.7
HLA-F-227ENST00000485513 FRAT1Q92837 279 aaPredicted RBP31.9■■■□□ 2.7
HLA-F-227ENST00000485513 MS4A4AQ96JQ5 239 aa31.9■■■□□ 2.7
HLA-F-227ENST00000485513 SALL1Q9NSC2 1324 aa31.9■■■□□ 2.7
HLA-F-227ENST00000485513 RPAP1Q9BWH6 1393 aaPredicted RBP31.9■■■□□ 2.7
HLA-F-227ENST00000485513 BCAR3O75815 825 aa31.89■■■□□ 2.7
HLA-F-227ENST00000485513 CRHR2Q13324 411 aa31.89■■■□□ 2.7
HLA-F-227ENST00000485513 MTX1Q13505 466 aa31.89■■■□□ 2.7
HLA-F-227ENST00000485513 CCDC102BQ68D86 513 aa31.88■■■□□ 2.69
HLA-F-227ENST00000485513 OTUD5Q96G74 571 aa31.88■■■□□ 2.69
HLA-F-227ENST00000485513 WRNIP1Q96S55 665 aa31.88■■■□□ 2.69
HLA-F-227ENST00000485513 TNNQ9UQP3 1299 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms