RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 RPS12P25398 132 aaKnown RBP21.25■□□□□ 0.99
CHMP3-207ENST00000485465 ADD2P35612 726 aa21.25■□□□□ 0.99
CHMP3-207ENST00000485465 DZIP1Q86YF9 867 aaKnown RBP21.25■□□□□ 0.99
CHMP3-207ENST00000485465 KIAA0825Q8IV33 1275 aa21.25■□□□□ 0.99
CHMP3-207ENST00000485465 GPC2Q8N158 579 aa21.25■□□□□ 0.99
CHMP3-207ENST00000485465 MAGEB6Q8N7X4 407 aa21.25■□□□□ 0.99
CHMP3-207ENST00000485465 ZNF384Q8TF68 577 aa21.25■□□□□ 0.99
CHMP3-207ENST00000485465 TTF2Q9UNY4 1162 aaKnown RBP21.25■□□□□ 0.99
CHMP3-207ENST00000485465 DOCK2Q92608 1830 aa21.25■□□□□ 0.99
CHMP3-207ENST00000485465 ZFYP08048 801 aaPredicted RBP21.24■□□□□ 0.99
CHMP3-207ENST00000485465 TMED8Q6PL24 325 aaPredicted RBP21.24■□□□□ 0.99
CHMP3-207ENST00000485465 MAST3O60307 1309 aa21.24■□□□□ 0.99
CHMP3-207ENST00000485465 TCRBV5S4A2TA0A5A2 114 aa21.23■□□□□ 0.99
CHMP3-207ENST00000485465 HIP1O00291 1037 aa21.23■□□□□ 0.99
CHMP3-207ENST00000485465 CHGBP05060 677 aa21.23■□□□□ 0.99
CHMP3-207ENST00000485465 GMPSP49915 693 aaPredicted RBP21.23■□□□□ 0.99
CHMP3-207ENST00000485465 GSTO1P78417 241 aa21.23■□□□□ 0.99
CHMP3-207ENST00000485465 UBE3CQ15386 1083 aa21.23■□□□□ 0.99
CHMP3-207ENST00000485465 NAA16Q6N069 864 aaPredicted RBP21.23■□□□□ 0.99
CHMP3-207ENST00000485465 ZNF532Q9HCE3 1301 aa21.23■□□□□ 0.99
CHMP3-207ENST00000485465 MYO5AQ9Y4I1 1855 aaKnown RBP21.22■□□□□ 0.99
CHMP3-207ENST00000485465 CDC45O75419 566 aa21.22■□□□□ 0.99
CHMP3-207ENST00000485465 CYP7A1P22680 504 aa21.22■□□□□ 0.99
CHMP3-207ENST00000485465 CHMLP26374 656 aa21.22■□□□□ 0.99
CHMP3-207ENST00000485465 SLFNL1Q499Z3 407 aa21.22■□□□□ 0.99
CHMP3-207ENST00000485465 DPY19L2Q6NUT2 758 aa21.22■□□□□ 0.99
CHMP3-207ENST00000485465 DPF2Q92785 391 aa21.22■□□□□ 0.99
CHMP3-207ENST00000485465 MRIQ9BWK5 157 aa21.22■□□□□ 0.99
CHMP3-207ENST00000485465 DIAPH3Q9NSV4 1193 aa21.22■□□□□ 0.99
CHMP3-207ENST00000485465 UTRNP46939 3433 aa21.22■□□□□ 0.99
CHMP3-207ENST00000485465 DDNO94850 711 aaPredicted RBP21.21■□□□□ 0.99
CHMP3-207ENST00000485465 LDHCP07864 332 aa21.21■□□□□ 0.99
CHMP3-207ENST00000485465 USP17L8P0C7I0 530 aa21.21■□□□□ 0.99
CHMP3-207ENST00000485465 SCNN1DP51172 638 aa21.21■□□□□ 0.99
CHMP3-207ENST00000485465 HDLBPQ00341 1268 aaKnown RBP21.21■□□□□ 0.99
CHMP3-207ENST00000485465 DIXDC1Q155Q3 683 aa21.21■□□□□ 0.99
CHMP3-207ENST00000485465 SLF2Q8IX21 1173 aa21.21■□□□□ 0.99
CHMP3-207ENST00000485465 AK9Q5TCS8 1911 aa21.21■□□□□ 0.99
CHMP3-207ENST00000485465 MMP14P50281 582 aa21.2■□□□□ 0.98
CHMP3-207ENST00000485465 NMIQ13287 307 aaPredicted RBP21.2■□□□□ 0.98
CHMP3-207ENST00000485465 ZMYM1Q5SVZ6 1142 aa21.2■□□□□ 0.98
CHMP3-207ENST00000485465 APPBP2Q92624 585 aa21.2■□□□□ 0.98
CHMP3-207ENST00000485465 FAM163AQ96GL9 167 aaPredicted RBP21.2■□□□□ 0.98
CHMP3-207ENST00000485465 HDAC9Q9UKV0 1011 aa21.2■□□□□ 0.98
CHMP3-207ENST00000485465 MAST2Q6P0Q8 1798 aa21.2■□□□□ 0.98
CHMP3-207ENST00000485465 GLTPD2A6NH11 291 aa21.19■□□□□ 0.98
CHMP3-207ENST00000485465 CRKP46108 304 aa21.19■□□□□ 0.98
CHMP3-207ENST00000485465 HHIPL2Q6UWX4 724 aa21.19■□□□□ 0.98
CHMP3-207ENST00000485465 ADGRA1Q86SQ6 560 aa21.19■□□□□ 0.98
CHMP3-207ENST00000485465 OGFOD1Q8N543 542 aa21.19■□□□□ 0.98
CHMP3-207ENST00000485465 TEKT1Q969V4 418 aa21.19■□□□□ 0.98
CHMP3-207ENST00000485465 FAM227BQ96M60 508 aa21.19■□□□□ 0.98
CHMP3-207ENST00000485465 SERPINA10Q9UK55 444 aa21.19■□□□□ 0.98
CHMP3-207ENST00000485465 MROH7-TTC4A0A0A0MT08 1334 aa21.19■□□□□ 0.98
CHMP3-207ENST00000485465 ZNF280AP59817 542 aaPredicted RBP21.18■□□□□ 0.98
CHMP3-207ENST00000485465 CASC1Q6TDU7 716 aa21.18■□□□□ 0.98
CHMP3-207ENST00000485465 CWC27Q6UX04 472 aaKnown RBP21.18■□□□□ 0.98
CHMP3-207ENST00000485465 OSBP2Q969R2 916 aa21.18■□□□□ 0.98
CHMP3-207ENST00000485465 HELLSQ9NRZ9 838 aa21.18■□□□□ 0.98
CHMP3-207ENST00000485465 CNOT7Q9UIV1 285 aaKnown RBP21.18■□□□□ 0.98
CHMP3-207ENST00000485465 GAKO14976 1311 aa21.18■□□□□ 0.98
CHMP3-207ENST00000485465 MYH7P12883 1935 aa21.17■□□□□ 0.98
CHMP3-207ENST00000485465 A0A0D9SFI3 127 aa21.17■□□□□ 0.98
CHMP3-207ENST00000485465 MICALL2Q8IY33 904 aa21.17■□□□□ 0.98
CHMP3-207ENST00000485465 SEC62Q99442 399 aaKnown RBP21.17■□□□□ 0.98
CHMP3-207ENST00000485465 PUS7LQ9H0K6 701 aaKnown RBP21.17■□□□□ 0.98
CHMP3-207ENST00000485465 GPRC5DQ9NZD1 345 aa21.17■□□□□ 0.98
CHMP3-207ENST00000485465 DAGLAQ9Y4D2 1042 aa21.17■□□□□ 0.98
CHMP3-207ENST00000485465 GPR75-ASB3A0A0A6YYF3 556 aa21.16■□□□□ 0.98
CHMP3-207ENST00000485465 SHTN1A0MZ66 631 aa21.16■□□□□ 0.98
CHMP3-207ENST00000485465 CFAP100Q494V2 611 aa21.16■□□□□ 0.98
CHMP3-207ENST00000485465 MCMDC2Q4G0Z9 681 aa21.16■□□□□ 0.98
CHMP3-207ENST00000485465 MIGA1Q8NAN2 632 aa21.16■□□□□ 0.98
CHMP3-207ENST00000485465 RUFY2Q8WXA3 655 aa21.16■□□□□ 0.98
CHMP3-207ENST00000485465 L3MBTL3Q96JM7 780 aaPredicted RBP21.16■□□□□ 0.98
CHMP3-207ENST00000485465 ZDHHC15Q96MV8 337 aa21.16■□□□□ 0.98
CHMP3-207ENST00000485465 MAGEB6P1A0A0J9YX57 407 aa21.15■□□□□ 0.98
CHMP3-207ENST00000485465 H7C1D1 291 aa21.15■□□□□ 0.98
CHMP3-207ENST00000485465 M0R2C6 588 aa21.15■□□□□ 0.98
CHMP3-207ENST00000485465 RBM5P52756 815 aaKnown RBP eCLIP21.15■□□□□ 0.98
CHMP3-207ENST00000485465 MTMR14Q8NCE2 650 aa21.15■□□□□ 0.98
CHMP3-207ENST00000485465 NOL10Q9BSC4 688 aaKnown RBP21.15■□□□□ 0.98
CHMP3-207ENST00000485465 BAG3O95817 575 aa21.14■□□□□ 0.97
CHMP3-207ENST00000485465 LMOD1P29536 600 aaPredicted RBP21.14■□□□□ 0.97
CHMP3-207ENST00000485465 BTDP43251 543 aa21.14■□□□□ 0.97
CHMP3-207ENST00000485465 PPP4CP60510 307 aa21.14■□□□□ 0.97
CHMP3-207ENST00000485465 DLGAP5Q15398 846 aa21.14■□□□□ 0.97
CHMP3-207ENST00000485465 APOBEC3HQ6NTF7 200 aaKnown RBP21.14■□□□□ 0.97
CHMP3-207ENST00000485465 RIOK1Q9BRS2 568 aaKnown RBP21.14■□□□□ 0.97
CHMP3-207ENST00000485465 ESYT1Q9BSJ8 1104 aa21.14■□□□□ 0.97
CHMP3-207ENST00000485465 MYOZ2Q9NPC6 264 aa21.14■□□□□ 0.97
CHMP3-207ENST00000485465 AATFQ9NY61 560 aaKnown RBP eCLIP21.14■□□□□ 0.97
CHMP3-207ENST00000485465 PCDHAC2Q9Y5I4 1007 aa21.14■□□□□ 0.97
CHMP3-207ENST00000485465 RAD50Q92878 1312 aa21.13■□□□□ 0.97
CHMP3-207ENST00000485465 SGSM2O43147 1006 aa21.13■□□□□ 0.97
CHMP3-207ENST00000485465 MBD4O95243 580 aa21.13■□□□□ 0.97
CHMP3-207ENST00000485465 EPS15P42566 896 aa21.13■□□□□ 0.97
CHMP3-207ENST00000485465 DYNLL1P63167 89 aaKnown RBP21.13■□□□□ 0.97
CHMP3-207ENST00000485465 AIDAQ96BJ3 306 aa21.13■□□□□ 0.97
CHMP3-207ENST00000485465 IL25Q9H293 177 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms