RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 RABL6Q3YEC7 729 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-227ENST00000485102 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-227ENST00000485102 TDRD3Q9H7E2 651 aaKnown RBP16.45■□□□□ 0.22
HDAC6-227ENST00000485102 JAG2Q9Y219 1238 aa16.45■□□□□ 0.22
HDAC6-227ENST00000485102 MAP3K9P80192 1104 aa16.44■□□□□ 0.22
HDAC6-227ENST00000485102 TBC1D22AQ8WUA7 517 aa16.44■□□□□ 0.22
HDAC6-227ENST00000485102 GCC1Q96CN9 775 aa16.44■□□□□ 0.22
HDAC6-227ENST00000485102 OPTNQ96CV9 577 aa16.44■□□□□ 0.22
HDAC6-227ENST00000485102 PUS3Q9BZE2 481 aaKnown RBP16.44■□□□□ 0.22
HDAC6-227ENST00000485102 EFCC1Q9HA90 598 aa16.44■□□□□ 0.22
HDAC6-227ENST00000485102 BRCA2P51587 3418 aa16.44■□□□□ 0.22
HDAC6-227ENST00000485102 RBBP6Q7Z6E9 1792 aaKnown RBP16.43■□□□□ 0.22
HDAC6-227ENST00000485102 NBPF7P0C2Y1 421 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-227ENST00000485102 CRKP46108 304 aa16.43■□□□□ 0.22
HDAC6-227ENST00000485102 TNNI2P48788 182 aa16.43■□□□□ 0.22
HDAC6-227ENST00000485102 FKBP1CQ5VVH2 108 aa16.43■□□□□ 0.22
HDAC6-227ENST00000485102 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.43■□□□□ 0.22
HDAC6-227ENST00000485102 CD99L2Q8TCZ2 262 aa16.43■□□□□ 0.22
HDAC6-227ENST00000485102 SUCLG2Q96I99 432 aa16.43■□□□□ 0.22
HDAC6-227ENST00000485102 SALL2Q9Y467 1007 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-227ENST00000485102 ARAP2Q8WZ64 1704 aa16.42■□□□□ 0.22
HDAC6-227ENST00000485102 OTOFQ9HC10 1997 aa16.42■□□□□ 0.22
HDAC6-227ENST00000485102 GTF2A2P52657 109 aa16.42■□□□□ 0.22
HDAC6-227ENST00000485102 ARHGEF6Q15052 776 aa16.42■□□□□ 0.22
HDAC6-227ENST00000485102 ELP3Q9H9T3 547 aa16.42■□□□□ 0.22
HDAC6-227ENST00000485102 SUGT1Q9Y2Z0 365 aa16.42■□□□□ 0.22
HDAC6-227ENST00000485102 POTEFA5A3E0 1075 aa16.41■□□□□ 0.22
HDAC6-227ENST00000485102 PDE8BO95263 885 aa16.41■□□□□ 0.22
HDAC6-227ENST00000485102 SLC4A10Q6U841 1118 aa16.41■□□□□ 0.22
HDAC6-227ENST00000485102 VGLL2Q8N8G2 317 aa16.41■□□□□ 0.22
HDAC6-227ENST00000485102 BRI3BPQ8WY22 251 aa16.41■□□□□ 0.22
HDAC6-227ENST00000485102 TMEM39BQ9GZU3 492 aa16.41■□□□□ 0.22
HDAC6-227ENST00000485102 ZCCHC17Q9NP64 241 aaKnown RBP16.41■□□□□ 0.22
HDAC6-227ENST00000485102 KIF16BQ96L93 1317 aa16.41■□□□□ 0.22
HDAC6-227ENST00000485102 TCP10L2B9ZVM9 353 aa16.4■□□□□ 0.22
HDAC6-227ENST00000485102 ANP32CO43423 234 aa16.4■□□□□ 0.22
HDAC6-227ENST00000485102 CAP1Q01518 475 aa16.4■□□□□ 0.22
HDAC6-227ENST00000485102 VGLL4Q14135 290 aa16.4■□□□□ 0.22
HDAC6-227ENST00000485102 CAVIN4Q5BKX8 364 aa16.4■□□□□ 0.22
HDAC6-227ENST00000485102 FAM83AQ86UY5 434 aa16.4■□□□□ 0.22
HDAC6-227ENST00000485102 CDAN1Q8IWY9 1227 aa16.4■□□□□ 0.22
HDAC6-227ENST00000485102 ZDHHC15Q96MV8 337 aa16.4■□□□□ 0.22
HDAC6-227ENST00000485102 ZFYVE28Q9HCC9 887 aa16.4■□□□□ 0.22
HDAC6-227ENST00000485102 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-227ENST00000485102 CSADQ9Y600 493 aa16.4■□□□□ 0.22
HDAC6-227ENST00000485102 CCL15-CCL14A0A0B4J2E2 113 aa16.39■□□□□ 0.21
HDAC6-227ENST00000485102 SPDYE5A6NIY4 337 aa16.39■□□□□ 0.21
HDAC6-227ENST00000485102 GRIK5Q16478 980 aa16.39■□□□□ 0.21
HDAC6-227ENST00000485102 CCL15Q16663 113 aa16.39■□□□□ 0.21
HDAC6-227ENST00000485102 VPS37DQ86XT2 251 aa16.39■□□□□ 0.21
HDAC6-227ENST00000485102 ANKRD44Q8N8A2 993 aa16.39■□□□□ 0.21
HDAC6-227ENST00000485102 TEKT1Q969V4 418 aa16.39■□□□□ 0.21
HDAC6-227ENST00000485102 HOOK2Q96ED9 719 aa16.39■□□□□ 0.21
HDAC6-227ENST00000485102 BICC1Q9H694 974 aaKnown RBP16.39■□□□□ 0.21
HDAC6-227ENST00000485102 ZNF521Q96K83 1311 aa16.39■□□□□ 0.21
HDAC6-227ENST00000485102 TAF1CQ15572 869 aaPredicted RBP16.38■□□□□ 0.21
HDAC6-227ENST00000485102 LRRC24Q50LG9 513 aa16.38■□□□□ 0.21
HDAC6-227ENST00000485102 HHIPL2Q6UWX4 724 aa16.38■□□□□ 0.21
HDAC6-227ENST00000485102 ERO1BQ86YB8 467 aa16.38■□□□□ 0.21
HDAC6-227ENST00000485102 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
HDAC6-227ENST00000485102 ZNF333Q96JL9 665 aa16.38■□□□□ 0.21
HDAC6-227ENST00000485102 FGFR2P21802 821 aa16.37■□□□□ 0.21
HDAC6-227ENST00000485102 METTL24Q5JXM2 366 aa16.37■□□□□ 0.21
HDAC6-227ENST00000485102 APOBEC3HQ6NTF7 200 aaKnown RBP16.37■□□□□ 0.21
HDAC6-227ENST00000485102 NBPF11Q86T75 865 aa16.37■□□□□ 0.21
HDAC6-227ENST00000485102 FAM43AQ8N2R8 423 aa16.37■□□□□ 0.21
HDAC6-227ENST00000485102 MAST3O60307 1309 aa16.37■□□□□ 0.21
HDAC6-227ENST00000485102 PTPRCP08575 1304 aa16.37■□□□□ 0.21
HDAC6-227ENST00000485102 TLR2O60603 784 aa16.36■□□□□ 0.21
HDAC6-227ENST00000485102 WDHD1O75717 1129 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-227ENST00000485102 GNRH1P01148 92 aa16.36■□□□□ 0.21
HDAC6-227ENST00000485102 CETPP11597 493 aa16.36■□□□□ 0.21
HDAC6-227ENST00000485102 MRPL50Q8N5N7 158 aaKnown RBP16.36■□□□□ 0.21
HDAC6-227ENST00000485102 TMEM106CQ9BVX2 250 aa16.36■□□□□ 0.21
HDAC6-227ENST00000485102 SNCAIPQ9Y6H5 919 aa16.36■□□□□ 0.21
HDAC6-227ENST00000485102 RPAP1Q9BWH6 1393 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-227ENST00000485102 FRAT2O75474 233 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-227ENST00000485102 EN2P19622 333 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-227ENST00000485102 BCAMP50895 628 aa16.35■□□□□ 0.21
HDAC6-227ENST00000485102 CHAF1AQ13111 956 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-227ENST00000485102 OTUD5Q96G74 571 aa16.35■□□□□ 0.21
HDAC6-227ENST00000485102 USP44Q9H0E7 712 aa16.35■□□□□ 0.21
HDAC6-227ENST00000485102 TMOD2Q9NZR1 351 aa16.35■□□□□ 0.21
HDAC6-227ENST00000485102 IQSEC3Q9UPP2 1182 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-227ENST00000485102 CEP290O15078 2479 aa16.35■□□□□ 0.21
HDAC6-227ENST00000485102 IRF6O14896 467 aa16.34■□□□□ 0.21
HDAC6-227ENST00000485102 ZBTB22O15209 634 aa16.34■□□□□ 0.21
HDAC6-227ENST00000485102 IFIT1P09914 478 aaKnown RBP16.34■□□□□ 0.21
HDAC6-227ENST00000485102 PRMT2P55345 433 aa16.34■□□□□ 0.21
HDAC6-227ENST00000485102 PPIL2Q13356 520 aa16.34■□□□□ 0.21
HDAC6-227ENST00000485102 SNAPC2Q13487 334 aa16.34■□□□□ 0.21
HDAC6-227ENST00000485102 PUM3Q15397 648 aaKnown RBP16.34■□□□□ 0.21
HDAC6-227ENST00000485102 HABP4Q5JVS0 413 aaKnown RBP16.34■□□□□ 0.21
HDAC6-227ENST00000485102 DCAF15Q66K64 600 aa16.34■□□□□ 0.21
HDAC6-227ENST00000485102 BTBD19C9JJ37 291 aa16.33■□□□□ 0.2
HDAC6-227ENST00000485102 CACNB3P54284 484 aa16.33■□□□□ 0.2
HDAC6-227ENST00000485102 LACTBP83111 547 aaPredicted RBP16.33■□□□□ 0.2
HDAC6-227ENST00000485102 PPATQ06203 517 aa16.33■□□□□ 0.2
HDAC6-227ENST00000485102 SLC9C1Q4G0N8 1177 aa16.33■□□□□ 0.2
HDAC6-227ENST00000485102 WDR66Q8TBY9 1149 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 201.6 ms