RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 CRKP46108 304 aa21.82■■□□□ 1.08
SREBF1-213ENST00000485080 HHIPL2Q6UWX4 724 aa21.82■■□□□ 1.08
SREBF1-213ENST00000485080 USP48Q86UV5 1035 aa21.82■■□□□ 1.08
SREBF1-213ENST00000485080 SPATA5Q8NB90 893 aa21.82■■□□□ 1.08
SREBF1-213ENST00000485080 PRMT6Q96LA8 375 aaPredicted RBP21.82■■□□□ 1.08
SREBF1-213ENST00000485080 ZDHHC15Q96MV8 337 aa21.82■■□□□ 1.08
SREBF1-213ENST00000485080 LDHBP07195 334 aaKnown RBP21.81■■□□□ 1.08
SREBF1-213ENST00000485080 MCAMP43121 646 aa21.81■■□□□ 1.08
SREBF1-213ENST00000485080 AACSQ86V21 672 aa21.81■■□□□ 1.08
SREBF1-213ENST00000485080 APOBEC3FQ8IUX4 373 aaKnown RBP21.81■■□□□ 1.08
SREBF1-213ENST00000485080 TEKT1Q969V4 418 aa21.81■■□□□ 1.08
SREBF1-213ENST00000485080 CCDC8Q9H0W5 538 aaPredicted RBP21.81■■□□□ 1.08
SREBF1-213ENST00000485080 MYO1BO43795 1136 aa21.8■■□□□ 1.08
SREBF1-213ENST00000485080 PRDX5P30044 214 aa21.8■■□□□ 1.08
SREBF1-213ENST00000485080 TTC39AQ5SRH9 613 aa21.8■■□□□ 1.08
SREBF1-213ENST00000485080 CST9Q5W186 159 aa21.8■■□□□ 1.08
SREBF1-213ENST00000485080 SPTY2D1Q68D10 685 aaPredicted RBP21.8■■□□□ 1.08
SREBF1-213ENST00000485080 LRRCC1Q9C099 1032 aa21.8■■□□□ 1.08
SREBF1-213ENST00000485080 IL1RAPL2Q9NP60 686 aa21.8■■□□□ 1.08
SREBF1-213ENST00000485080 TLR7Q9NYK1 1049 aaKnown RBP21.8■■□□□ 1.08
SREBF1-213ENST00000485080 AKAP11Q9UKA4 1901 aa21.8■■□□□ 1.08
SREBF1-213ENST00000485080 ECM29Q5VYK3 1845 aa21.8■■□□□ 1.08
SREBF1-213ENST00000485080 HDAC1Q13547 482 aaPredicted RBP21.79■■□□□ 1.08
SREBF1-213ENST00000485080 DNAJC5GQ8N7S2 189 aa21.79■■□□□ 1.08
SREBF1-213ENST00000485080 PCDHAC2Q9Y5I4 1007 aa21.79■■□□□ 1.08
SREBF1-213ENST00000485080 ADM5C9JUS6 153 aa21.78■■□□□ 1.08
SREBF1-213ENST00000485080 RBM5P52756 815 aaKnown RBP eCLIP21.78■■□□□ 1.082e-7■■■□□ 15
SREBF1-213ENST00000485080 FMR1Q06787 632 aaKnown RBP eCLIP21.78■■□□□ 1.08
SREBF1-213ENST00000485080 SPDYE2Q495Y8 402 aa21.78■■□□□ 1.08
SREBF1-213ENST00000485080 FAM163AQ96GL9 167 aaPredicted RBP21.78■■□□□ 1.08
SREBF1-213ENST00000485080 PCNTO95613 3336 aa21.77■■□□□ 1.08
SREBF1-213ENST00000485080 APOBEC3HQ6NTF7 200 aaKnown RBP21.77■■□□□ 1.08
SREBF1-213ENST00000485080 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.77■■□□□ 1.08
SREBF1-213ENST00000485080 PPP2R3BQ9Y5P8 575 aa21.77■■□□□ 1.08
SREBF1-213ENST00000485080 APBB1O00213 710 aa21.76■■□□□ 1.07
SREBF1-213ENST00000485080 CELF2O95319 508 aaKnown RBP21.76■■□□□ 1.07
SREBF1-213ENST00000485080 IFIT2P09913 472 aaKnown RBP21.76■■□□□ 1.07
SREBF1-213ENST00000485080 FKBP1CQ5VVH2 108 aa21.76■■□□□ 1.07
SREBF1-213ENST00000485080 PI16Q6UXB8 463 aa21.76■■□□□ 1.07
SREBF1-213ENST00000485080 SLF2Q8IX21 1173 aa21.76■■□□□ 1.07
SREBF1-213ENST00000485080 GAKO14976 1311 aa21.76■■□□□ 1.07
SREBF1-213ENST00000485080 AOX1Q06278 1338 aa21.76■■□□□ 1.07
SREBF1-213ENST00000485080 ERICH6Q7L0X2 663 aa21.75■■□□□ 1.07
SREBF1-213ENST00000485080 EXOC6Q8TAG9 804 aa21.75■■□□□ 1.07
SREBF1-213ENST00000485080 CDCA5Q96FF9 252 aa21.75■■□□□ 1.07
SREBF1-213ENST00000485080 ZNF70Q9UC06 446 aaPredicted RBP21.75■■□□□ 1.07
SREBF1-213ENST00000485080 ABCF2Q9UG63 623 aa21.75■■□□□ 1.07
SREBF1-213ENST00000485080 RASSF10A6NK89 507 aa21.74■■□□□ 1.07
SREBF1-213ENST00000485080 HTRA3P83110 453 aa21.74■■□□□ 1.07
SREBF1-213ENST00000485080 DEFB129Q9H1M3 183 aa21.74■■□□□ 1.07
SREBF1-213ENST00000485080 DAGLAQ9Y4D2 1042 aa21.74■■□□□ 1.07
SREBF1-213ENST00000485080 CYP2E1P05181 493 aaPredicted RBP21.73■■□□□ 1.07
SREBF1-213ENST00000485080 TNFAIP1Q13829 316 aa21.73■■□□□ 1.07
SREBF1-213ENST00000485080 DIXDC1Q155Q3 683 aa21.73■■□□□ 1.07
SREBF1-213ENST00000485080 TMED8Q6PL24 325 aaPredicted RBP21.73■■□□□ 1.07
SREBF1-213ENST00000485080 DLK2Q6UY11 383 aa21.73■■□□□ 1.07
SREBF1-213ENST00000485080 DZIP1Q86YF9 867 aaKnown RBP21.73■■□□□ 1.07
SREBF1-213ENST00000485080 NSUN4Q96CB9 384 aaKnown RBP21.73■■□□□ 1.07
SREBF1-213ENST00000485080 GCC1Q96CN9 775 aa21.73■■□□□ 1.07
SREBF1-213ENST00000485080 HHIPL1Q96JK4 782 aa21.73■■□□□ 1.07
SREBF1-213ENST00000485080 TDRD3Q9H7E2 651 aaKnown RBP21.73■■□□□ 1.07
SREBF1-213ENST00000485080 TLL2Q9Y6L7 1015 aa21.73■■□□□ 1.07
SREBF1-213ENST00000485080 CLRN2A0PK11 232 aa21.72■■□□□ 1.07
SREBF1-213ENST00000485080 ZAP70P43403 619 aa21.72■■□□□ 1.07
SREBF1-213ENST00000485080 FKBP1BP68106 108 aa21.72■■□□□ 1.07
SREBF1-213ENST00000485080 MECOMQ03112 1051 aa21.72■■□□□ 1.07
SREBF1-213ENST00000485080 TBC1D9Q6ZT07 1266 aa21.72■■□□□ 1.07
SREBF1-213ENST00000485080 SAPCD2Q86UD0 394 aa21.72■■□□□ 1.07
SREBF1-213ENST00000485080 ZNF384Q8TF68 577 aa21.72■■□□□ 1.07
SREBF1-213ENST00000485080 KLRG1Q96E93 195 aa21.72■■□□□ 1.07
SREBF1-213ENST00000485080 SNRKQ9NRH2 765 aa21.72■■□□□ 1.07
SREBF1-213ENST00000485080 MYH2Q9UKX2 1941 aa21.71■■□□□ 1.07
SREBF1-213ENST00000485080 ATP5JP18859 108 aa21.71■■□□□ 1.07
SREBF1-213ENST00000485080 GSTO1P78417 241 aa21.71■■□□□ 1.07
SREBF1-213ENST00000485080 GBA2Q9HCG7 927 aaPredicted RBP21.71■■□□□ 1.07
SREBF1-213ENST00000485080 CNTNAP1P78357 1384 aa21.71■■□□□ 1.07
SREBF1-213ENST00000485080 MAP4K4O95819 1239 aaPredicted RBP21.7■■□□□ 1.06
SREBF1-213ENST00000485080 LDHCP07864 332 aa21.7■■□□□ 1.06
SREBF1-213ENST00000485080 FAM83AQ86UY5 434 aa21.7■■□□□ 1.06
SREBF1-213ENST00000485080 C2orf69Q8N8R5 385 aa21.7■■□□□ 1.06
SREBF1-213ENST00000485080 VEZTQ9HBM0 779 aa21.7■■□□□ 1.06
SREBF1-213ENST00000485080 LRP2BPQ9P2M1 347 aa21.7■■□□□ 1.06
SREBF1-213ENST00000485080 GPR75-ASB3A0A0A6YYF3 556 aa21.69■■□□□ 1.06
SREBF1-213ENST00000485080 SMARCA5O60264 1052 aaPredicted RBP21.69■■□□□ 1.06
SREBF1-213ENST00000485080 RASA3Q14644 834 aa21.69■■□□□ 1.06
SREBF1-213ENST00000485080 CDC42EP5Q6NZY7 148 aa21.69■■□□□ 1.06
SREBF1-213ENST00000485080 RWDD1Q9H446 243 aaPredicted RBP21.69■■□□□ 1.06
SREBF1-213ENST00000485080 TMOD2Q9NZR1 351 aa21.69■■□□□ 1.06
SREBF1-213ENST00000485080 ABT1Q9ULW3 272 aaKnown RBP21.69■■□□□ 1.06
SREBF1-213ENST00000485080 SCAF8Q9UPN6 1271 aaKnown RBP21.69■■□□□ 1.06
SREBF1-213ENST00000485080 MROH7-TTC4A0A0A0MT08 1334 aa21.69■■□□□ 1.06
SREBF1-213ENST00000485080 NF2P35240 595 aa21.68■■□□□ 1.06
SREBF1-213ENST00000485080 TNNI2P48788 182 aa21.68■■□□□ 1.06
SREBF1-213ENST00000485080 TTF1Q15361 905 aaPredicted RBP21.68■■□□□ 1.06
SREBF1-213ENST00000485080 DEFB115Q30KQ5 88 aa21.68■■□□□ 1.06
SREBF1-213ENST00000485080 ZNF408Q9H9D4 720 aa21.68■■□□□ 1.06
SREBF1-213ENST00000485080 PIH1D3Q9NQM4 214 aaKnown RBP21.68■■□□□ 1.06
SREBF1-213ENST00000485080 RAI14Q9P0K7 980 aa21.68■■□□□ 1.06
SREBF1-213ENST00000485080 SUPT20HL1Q3ZLR7 823 aa21.67■■□□□ 1.06
SREBF1-213ENST00000485080 SMC5Q8IY18 1101 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms