RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 GUCY2CP25092 1073 aa10.75□□□□□ -0.69
USP16-206ENST00000485067 SYNE4Q8N205 404 aa10.75□□□□□ -0.69
USP16-206ENST00000485067 ZNF594Q96JF6 807 aaPredicted RBP10.75□□□□□ -0.69
USP16-206ENST00000485067 PDLIM2Q96JY6 352 aa10.75□□□□□ -0.69
USP16-206ENST00000485067 UBA5Q9GZZ9 404 aa10.75□□□□□ -0.69
USP16-206ENST00000485067 TSPY26PQ9H489 355 aa10.75□□□□□ -0.69
USP16-206ENST00000485067 TMOD3Q9NYL9 352 aa10.75□□□□□ -0.69
USP16-206ENST00000485067 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
USP16-206ENST00000485067 CHMP3Q9Y3E7 222 aa10.75□□□□□ -0.69
USP16-206ENST00000485067 ITGB4P16144 1822 aa10.75□□□□□ -0.69
USP16-206ENST00000485067 LARGE1O95461 756 aa10.74□□□□□ -0.69
USP16-206ENST00000485067 NAT1P18440 290 aa10.74□□□□□ -0.69
USP16-206ENST00000485067 ABCD1P33897 745 aa10.74□□□□□ -0.69
USP16-206ENST00000485067 IL15P40933 162 aaPredicted RBP10.74□□□□□ -0.69
USP16-206ENST00000485067 RBM5P52756 815 aaKnown RBP eCLIP10.74□□□□□ -0.69
USP16-206ENST00000485067 ME3Q16798 604 aa10.74□□□□□ -0.69
USP16-206ENST00000485067 KRI1Q8N9T8 703 aaKnown RBP10.74□□□□□ -0.69
USP16-206ENST00000485067 FAM184AQ8NB25 1140 aa10.74□□□□□ -0.69
USP16-206ENST00000485067 CCDC85AQ96PX6 553 aaPredicted RBP10.74□□□□□ -0.69
USP16-206ENST00000485067 NOL10Q9BSC4 688 aaKnown RBP10.74□□□□□ -0.69
USP16-206ENST00000485067 SUFUQ9UMX1 484 aa10.74□□□□□ -0.69
USP16-206ENST00000485067 SMAPO00193 183 aa10.74□□□□□ -0.69
USP16-206ENST00000485067 CIAO1O76071 339 aa10.74□□□□□ -0.69
USP16-206ENST00000485067 NAP1L1P55209 391 aaKnown RBP10.74□□□□□ -0.69
USP16-206ENST00000485067 MCMDC2Q4G0Z9 681 aa10.74□□□□□ -0.69
USP16-206ENST00000485067 CCDC183Q5T5S1 534 aa10.74□□□□□ -0.69
USP16-206ENST00000485067 ZSCAN30Q86W11 494 aa10.74□□□□□ -0.69
USP16-206ENST00000485067 ERCC4Q92889 916 aaPredicted RBP10.74□□□□□ -0.69
USP16-206ENST00000485067 ARPC5LQ9BPX5 153 aa10.74□□□□□ -0.69
USP16-206ENST00000485067 MAF1Q9H063 256 aa10.74□□□□□ -0.69
USP16-206ENST00000485067 SH3TC1Q8TE82 1336 aa10.74□□□□□ -0.69
USP16-206ENST00000485067 ZC3H4Q9UPT8 1303 aaKnown RBP10.74□□□□□ -0.69
USP16-206ENST00000485067 PALLDQ8WX93 1383 aa10.74□□□□□ -0.69
USP16-206ENST00000485067 UQCRHLA0A096LP55 91 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 SPDYE2BA6NHP3 402 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 PES1O00541 588 aaKnown RBP10.73□□□□□ -0.69
USP16-206ENST00000485067 UQCRHP07919 91 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 SPDYE6P0CI01 402 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 CDC37Q16543 378 aaPredicted RBP10.73□□□□□ -0.69
USP16-206ENST00000485067 SPDYE2Q495Y8 402 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 SLFNL1Q499Z3 407 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 MICAL1Q8TDZ2 1067 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 SNRNP27Q8WVK2 155 aaKnown RBP10.73□□□□□ -0.69
USP16-206ENST00000485067 SYTL4Q96C24 671 aaPredicted RBP10.73□□□□□ -0.69
USP16-206ENST00000485067 TEX13AQ9BXU3 409 aaPredicted RBP10.73□□□□□ -0.69
USP16-206ENST00000485067 TMX4Q9H1E5 349 aaPredicted RBP10.73□□□□□ -0.69
USP16-206ENST00000485067 TPCN1Q9ULQ1 816 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 MTMR6Q9Y217 621 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 CNPY2Q9Y2B0 182 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 TAF6LQ9Y6J9 622 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 CARNS1A5YM72 827 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 GADD45BO75293 160 aaPredicted RBP10.73□□□□□ -0.69
USP16-206ENST00000485067 MCCD1P59942 119 aaPredicted RBP10.73□□□□□ -0.69
USP16-206ENST00000485067 CBX1P83916 185 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 E2F4Q16254 413 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 ZNF589Q86UQ0 364 aaPredicted RBP10.73□□□□□ -0.69
USP16-206ENST00000485067 KBTBD3Q8NAB2 608 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 DBNDD2Q9BQY9 259 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 ARHGEF10LQ9HCE6 1279 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 DISP2A7MBM2 1401 aa10.73□□□□□ -0.69
USP16-206ENST00000485067 LRRC24Q50LG9 513 aa10.72□□□□□ -0.69
USP16-206ENST00000485067 ATG9AQ7Z3C6 839 aa10.72□□□□□ -0.69
USP16-206ENST00000485067 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.72□□□□□ -0.69
USP16-206ENST00000485067 PUS3Q9BZE2 481 aaKnown RBP10.72□□□□□ -0.69
USP16-206ENST00000485067 HELLSQ9NRZ9 838 aa10.72□□□□□ -0.69
USP16-206ENST00000485067 ZNF609O15014 1411 aa10.72□□□□□ -0.69
USP16-206ENST00000485067 EYA2O00167 538 aa10.72□□□□□ -0.69
USP16-206ENST00000485067 ST3GAL1Q11201 340 aa10.72□□□□□ -0.69
USP16-206ENST00000485067 MCM6Q14566 821 aa10.72□□□□□ -0.69
USP16-206ENST00000485067 HLFQ16534 295 aa10.72□□□□□ -0.69
USP16-206ENST00000485067 LARP1BQ659C4 914 aaKnown RBP10.72□□□□□ -0.69
USP16-206ENST00000485067 CLEC4GQ6UXB4 293 aa10.72□□□□□ -0.69
USP16-206ENST00000485067 FNBP4Q8N3X1 1017 aaPredicted RBP10.72□□□□□ -0.69
USP16-206ENST00000485067 GDPD2Q9HCC8 539 aa10.72□□□□□ -0.69
USP16-206ENST00000485067 MAGEC2Q9UBF1 373 aaPredicted RBP10.72□□□□□ -0.69
USP16-206ENST00000485067 SYNRGQ9UMZ2 1314 aa10.71□□□□□ -0.69
USP16-206ENST00000485067 A0A0G2JS52 829 aa10.71□□□□□ -0.69
USP16-206ENST00000485067 NUTM2BA6NNL0 878 aaPredicted RBP10.71□□□□□ -0.69
USP16-206ENST00000485067 NUTM2EB1AL46 878 aaPredicted RBP10.71□□□□□ -0.69
USP16-206ENST00000485067 FAM200BP0CF97 657 aa10.71□□□□□ -0.69
USP16-206ENST00000485067 TNNT1P13805 278 aa10.71□□□□□ -0.69
USP16-206ENST00000485067 MSNP26038 577 aaKnown RBP10.71□□□□□ -0.69
USP16-206ENST00000485067 TRIM28Q13263 835 aaKnown RBP10.71□□□□□ -0.69
USP16-206ENST00000485067 LRRFIP1Q32MZ4 808 aaKnown RBP10.71□□□□□ -0.69
USP16-206ENST00000485067 MFSD4BQ5TF39 518 aa10.71□□□□□ -0.69
USP16-206ENST00000485067 NUTM2AQ8IVF1 878 aaPredicted RBP10.71□□□□□ -0.69
USP16-206ENST00000485067 NEK1Q96PY6 1258 aa10.71□□□□□ -0.69
USP16-206ENST00000485067 GPTP24298 496 aa10.7□□□□□ -0.7
USP16-206ENST00000485067 MCM5P33992 734 aa10.7□□□□□ -0.7
USP16-206ENST00000485067 HMGN5P82970 282 aaKnown RBP10.7□□□□□ -0.7
USP16-206ENST00000485067 TOB2Q14106 344 aaPredicted RBP10.7□□□□□ -0.7
USP16-206ENST00000485067 FAM89AQ96GI7 184 aa10.7□□□□□ -0.7
USP16-206ENST00000485067 ISCA1Q9BUE6 129 aa10.7□□□□□ -0.7
USP16-206ENST00000485067 PAG1Q9NWQ8 432 aa10.7□□□□□ -0.7
USP16-206ENST00000485067 LAMA4Q16363 1823 aa10.7□□□□□ -0.7
USP16-206ENST00000485067 COL14A1Q05707 1796 aaKnown RBP10.7□□□□□ -0.7
USP16-206ENST00000485067 ELP1O95163 1332 aa10.7□□□□□ -0.7
USP16-206ENST00000485067 VPS37CA5D8V6 355 aaPredicted RBP10.7□□□□□ -0.7
USP16-206ENST00000485067 ANKRD62A6NC57 917 aa10.7□□□□□ -0.7
USP16-206ENST00000485067 HMGB1P1B2RPK0 211 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms