RNA–Protein interactions for RNA: ENST00000484990.1

COL13A1-209, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 360 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-209ENST00000484990 FANCIQ9NVI1 1328 aa14.58□□□□□ -0.08
COL13A1-209ENST00000484990 CCL15-CCL14A0A0B4J2E2 113 aa14.57□□□□□ -0.08
COL13A1-209ENST00000484990 FRAT2O75474 233 aaPredicted RBP14.57□□□□□ -0.08
COL13A1-209ENST00000484990 ALDH1L1O75891 902 aa14.57□□□□□ -0.08
COL13A1-209ENST00000484990 CRKP46108 304 aa14.57□□□□□ -0.08
COL13A1-209ENST00000484990 GYG1P46976 350 aa14.57□□□□□ -0.08
COL13A1-209ENST00000484990 KIF22Q14807 665 aa14.57□□□□□ -0.08
COL13A1-209ENST00000484990 CCL15Q16663 113 aa14.57□□□□□ -0.08
COL13A1-209ENST00000484990 SLC4A8Q2Y0W8 1093 aa14.57□□□□□ -0.08
COL13A1-209ENST00000484990 SLC9C1Q4G0N8 1177 aa14.57□□□□□ -0.08
COL13A1-209ENST00000484990 EPHA10Q5JZY3 1008 aa14.57□□□□□ -0.08
COL13A1-209ENST00000484990 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.57□□□□□ -0.08
COL13A1-209ENST00000484990 AOX1Q06278 1338 aa14.57□□□□□ -0.08
COL13A1-209ENST00000484990 HDLBPQ00341 1268 aaKnown RBP14.56□□□□□ -0.08
COL13A1-209ENST00000484990 CAVIN4Q5BKX8 364 aa14.56□□□□□ -0.08
COL13A1-209ENST00000484990 TBC1D22AQ8WUA7 517 aa14.56□□□□□ -0.08
COL13A1-209ENST00000484990 HOOK2Q96ED9 719 aa14.56□□□□□ -0.08
COL13A1-209ENST00000484990 ZNF333Q96JL9 665 aa14.56□□□□□ -0.08
COL13A1-209ENST00000484990 TEPSINQ96N21 525 aa14.56□□□□□ -0.08
COL13A1-209ENST00000484990 MROH5Q6ZUA9 1318 aa14.56□□□□□ -0.08
COL13A1-209ENST00000484990 CETPP11597 493 aa14.55□□□□□ -0.08
COL13A1-209ENST00000484990 VGLL4Q14135 290 aa14.55□□□□□ -0.08
COL13A1-209ENST00000484990 CCDC184Q52MB2 194 aa14.55□□□□□ -0.08
COL13A1-209ENST00000484990 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.55□□□□□ -0.08
COL13A1-209ENST00000484990 BRI3BPQ8WY22 251 aa14.55□□□□□ -0.08
COL13A1-209ENST00000484990 MRIQ9BWK5 157 aa14.55□□□□□ -0.08
COL13A1-209ENST00000484990 SRCIN1Q9C0H9 1055 aa14.55□□□□□ -0.08
COL13A1-209ENST00000484990 TMEM39BQ9GZU3 492 aa14.55□□□□□ -0.08
COL13A1-209ENST00000484990 TMOD2Q9NZR1 351 aa14.55□□□□□ -0.08
COL13A1-209ENST00000484990 SALL2Q9Y467 1007 aaPredicted RBP14.55□□□□□ -0.08
COL13A1-209ENST00000484990 RBBP6Q7Z6E9 1792 aaKnown RBP14.55□□□□□ -0.08
COL13A1-209ENST00000484990 GNRH1P01148 92 aa14.54□□□□□ -0.08
COL13A1-209ENST00000484990 SLC4A10Q6U841 1118 aa14.54□□□□□ -0.08
COL13A1-209ENST00000484990 FBXO33Q7Z6M2 555 aa14.54□□□□□ -0.08
COL13A1-209ENST00000484990 ERO1BQ86YB8 467 aa14.54□□□□□ -0.08
COL13A1-209ENST00000484990 TEKT1Q969V4 418 aa14.54□□□□□ -0.08
COL13A1-209ENST00000484990 OTUD5Q96G74 571 aa14.54□□□□□ -0.08
COL13A1-209ENST00000484990 ZCCHC17Q9NP64 241 aaKnown RBP14.54□□□□□ -0.08
COL13A1-209ENST00000484990 RIPOR2Q9Y4F9 1068 aa14.54□□□□□ -0.08
COL13A1-209ENST00000484990 A0A1B0GUL6 1792 aa14.53□□□□□ -0.08
COL13A1-209ENST00000484990 TLR2O60603 784 aa14.53□□□□□ -0.08
COL13A1-209ENST00000484990 FAM43AQ8N2R8 423 aa14.53□□□□□ -0.08
COL13A1-209ENST00000484990 CNKSR2Q8WXI2 1034 aa14.53□□□□□ -0.08
COL13A1-209ENST00000484990 PUS3Q9BZE2 481 aaKnown RBP14.53□□□□□ -0.08
COL13A1-209ENST00000484990 PTCH2Q9Y6C5 1203 aa14.53□□□□□ -0.08
COL13A1-209ENST00000484990 SPDYE5A6NIY4 337 aa14.52□□□□□ -0.09
COL13A1-209ENST00000484990 PRMT2P55345 433 aa14.52□□□□□ -0.09
COL13A1-209ENST00000484990 CHAF1AQ13111 956 aaPredicted RBP14.52□□□□□ -0.09
COL13A1-209ENST00000484990 SNAPC2Q13487 334 aa14.52□□□□□ -0.09
COL13A1-209ENST00000484990 DCAF15Q66K64 600 aa14.52□□□□□ -0.09
COL13A1-209ENST00000484990 FAM83AQ86UY5 434 aa14.52□□□□□ -0.09
COL13A1-209ENST00000484990 MAST3O60307 1309 aa14.51□□□□□ -0.09
COL13A1-209ENST00000484990 CAP1Q01518 475 aa14.51□□□□□ -0.09
COL13A1-209ENST00000484990 METTL24Q5JXM2 366 aa14.51□□□□□ -0.09
COL13A1-209ENST00000484990 FKBP1CQ5VVH2 108 aa14.51□□□□□ -0.09
COL13A1-209ENST00000484990 CDAN1Q8IWY9 1227 aa14.51□□□□□ -0.09
COL13A1-209ENST00000484990 SUCLG2Q96I99 432 aa14.51□□□□□ -0.09
COL13A1-209ENST00000484990 MRS2Q9HD23 443 aa14.51□□□□□ -0.09
COL13A1-209ENST00000484990 IQSEC3Q9UPP2 1182 aaPredicted RBP14.51□□□□□ -0.09
COL13A1-209ENST00000484990 SUGT1Q9Y2Z0 365 aa14.51□□□□□ -0.09
COL13A1-209ENST00000484990 CENPFP49454 3210 aa14.51□□□□□ -0.09
COL13A1-209ENST00000484990 HTTP42858 3142 aa14.51□□□□□ -0.09
COL13A1-209ENST00000484990 OTOFQ9HC10 1997 aa14.51□□□□□ -0.09
COL13A1-209ENST00000484990 MKI67P46013 3256 aaKnown RBP14.51□□□□□ -0.09
COL13A1-209ENST00000484990 PDE8BO95263 885 aa14.5□□□□□ -0.09
COL13A1-209ENST00000484990 HOXD10P28358 340 aa14.5□□□□□ -0.09
COL13A1-209ENST00000484990 LACTBP83111 547 aaPredicted RBP14.5□□□□□ -0.09
COL13A1-209ENST00000484990 ZDHHC15Q96MV8 337 aa14.5□□□□□ -0.09
COL13A1-209ENST00000484990 WRNIP1Q96S55 665 aa14.5□□□□□ -0.09
COL13A1-209ENST00000484990 BTBD19C9JJ37 291 aa14.49□□□□□ -0.09
COL13A1-209ENST00000484990 IRF6O14896 467 aa14.49□□□□□ -0.09
COL13A1-209ENST00000484990 NBPF7P0C2Y1 421 aaPredicted RBP14.49□□□□□ -0.09
COL13A1-209ENST00000484990 FXR1P51114 621 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL13A1-209ENST00000484990 CACNB3P54284 484 aa14.49□□□□□ -0.09
COL13A1-209ENST00000484990 PPATQ06203 517 aa14.49□□□□□ -0.09
COL13A1-209ENST00000484990 PPIL2Q13356 520 aa14.49□□□□□ -0.09
COL13A1-209ENST00000484990 HHIPL2Q6UWX4 724 aa14.49□□□□□ -0.09
COL13A1-209ENST00000484990 ZKSCAN4Q969J2 545 aaPredicted RBP14.49□□□□□ -0.09
COL13A1-209ENST00000484990 SNCAIPQ9Y6H5 919 aa14.49□□□□□ -0.09
COL13A1-209ENST00000484990 UTYO14607 1347 aa14.48□□□□□ -0.09
COL13A1-209ENST00000484990 MYCP01106 439 aaPredicted RBP14.48□□□□□ -0.09
COL13A1-209ENST00000484990 IFIT1P09914 478 aaKnown RBP14.48□□□□□ -0.09
COL13A1-209ENST00000484990 BCAMP50895 628 aa14.48□□□□□ -0.09
COL13A1-209ENST00000484990 GRIK5Q16478 980 aa14.48□□□□□ -0.09
COL13A1-209ENST00000484990 LRRC24Q50LG9 513 aa14.48□□□□□ -0.09
COL13A1-209ENST00000484990 NKX2-3Q8TAU0 364 aa14.48□□□□□ -0.09
COL13A1-209ENST00000484990 SH3TC2Q8TF17 1288 aa14.48□□□□□ -0.09
COL13A1-209ENST00000484990 KAZALD1Q96I82 304 aa14.48□□□□□ -0.09
COL13A1-209ENST00000484990 ZNF341Q9BYN7 854 aa14.48□□□□□ -0.09
COL13A1-209ENST00000484990 BICC1Q9H694 974 aaKnown RBP14.48□□□□□ -0.09
COL13A1-209ENST00000484990 COLQQ9Y215 455 aaPredicted RBP14.48□□□□□ -0.09
COL13A1-209ENST00000484990 CEP290O15078 2479 aa14.48□□□□□ -0.09
COL13A1-209ENST00000484990 RABL6Q3YEC7 729 aaPredicted RBP14.47□□□□□ -0.09
COL13A1-209ENST00000484990 APOBEC3HQ6NTF7 200 aaKnown RBP14.47□□□□□ -0.09
COL13A1-209ENST00000484990 ARHGAP39Q9C0H5 1083 aa14.47□□□□□ -0.09
COL13A1-209ENST00000484990 SPINK5Q9NQ38 1064 aaPredicted RBP14.47□□□□□ -0.09
COL13A1-209ENST00000484990 AK9Q5TCS8 1911 aa14.47□□□□□ -0.09
COL13A1-209ENST00000484990 ARAP2Q8WZ64 1704 aa14.46□□□□□ -0.09
COL13A1-209ENST00000484990 ZEB1P37275 1124 aaPredicted RBP14.46□□□□□ -0.09
COL13A1-209ENST00000484990 PSMC4P43686 418 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms