RNA–Protein interactions for RNA: ENST00000484968.1

NEB-213, Transcript of nebulin, humanhuman

TSL 4

Gene NEB, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-213ENST00000484968 CNTROBQ8N137 903 aa11.35□□□□□ -0.59
NEB-213ENST00000484968 MAGEB6Q8N7X4 407 aa11.35□□□□□ -0.59
NEB-213ENST00000484968 FSD1Q9BTV5 496 aa11.35□□□□□ -0.59
NEB-213ENST00000484968 PUS7LQ9H0K6 701 aaKnown RBP11.35□□□□□ -0.59
NEB-213ENST00000484968 RAI14Q9P0K7 980 aa11.35□□□□□ -0.59
NEB-213ENST00000484968 LRP2BPQ9P2M1 347 aa11.35□□□□□ -0.59
NEB-213ENST00000484968 GJA3Q9Y6H8 435 aa11.35□□□□□ -0.59
NEB-213ENST00000484968 DICER1Q9UPY3 1922 aaKnown RBP11.35□□□□□ -0.59
NEB-213ENST00000484968 PSME4Q14997 1843 aa11.35□□□□□ -0.59
NEB-213ENST00000484968 ADAMTSL1Q8N6G6 1762 aa11.34□□□□□ -0.59
NEB-213ENST00000484968 POTECB2RU33 542 aa11.34□□□□□ -0.59
NEB-213ENST00000484968 M0R2C6 588 aa11.34□□□□□ -0.59
NEB-213ENST00000484968 RNF113AO15541 343 aaKnown RBP11.34□□□□□ -0.59
NEB-213ENST00000484968 LDHBP07195 334 aaKnown RBP11.34□□□□□ -0.59
NEB-213ENST00000484968 DYNLL1P63167 89 aaKnown RBP11.34□□□□□ -0.59
NEB-213ENST00000484968 TTF1Q15361 905 aaPredicted RBP11.34□□□□□ -0.59
NEB-213ENST00000484968 CCDC129Q6ZRS4 1044 aa11.34□□□□□ -0.59
NEB-213ENST00000484968 ERICH6Q7L0X2 663 aa11.34□□□□□ -0.59
NEB-213ENST00000484968 ZNF589Q86UQ0 364 aaPredicted RBP11.34□□□□□ -0.59
NEB-213ENST00000484968 TBC1D22AQ8WUA7 517 aa11.34□□□□□ -0.59
NEB-213ENST00000484968 TTF2Q9UNY4 1162 aaKnown RBP11.34□□□□□ -0.59
NEB-213ENST00000484968 TIAM2Q8IVF5 1701 aa11.34□□□□□ -0.59
NEB-213ENST00000484968 EIF6P56537 245 aaKnown RBP11.33□□□□□ -0.6
NEB-213ENST00000484968 UBE3CQ15386 1083 aa11.33□□□□□ -0.6
NEB-213ENST00000484968 APOBEC3HQ6NTF7 200 aaKnown RBP11.33□□□□□ -0.6
NEB-213ENST00000484968 CWC27Q6UX04 472 aaKnown RBP11.33□□□□□ -0.6
NEB-213ENST00000484968 MIGA1Q8NAN2 632 aa11.33□□□□□ -0.6
NEB-213ENST00000484968 AGBL3Q8NEM8 1001 aa11.33□□□□□ -0.6
NEB-213ENST00000484968 FAM163AQ96GL9 167 aaPredicted RBP11.33□□□□□ -0.6
NEB-213ENST00000484968 ZBED3Q96IU2 234 aaPredicted RBP11.33□□□□□ -0.6
NEB-213ENST00000484968 RIOK1Q9BRS2 568 aaKnown RBP11.33□□□□□ -0.6
NEB-213ENST00000484968 DAGLAQ9Y4D2 1042 aa11.33□□□□□ -0.6
NEB-213ENST00000484968 MYH13Q9UKX3 1938 aa11.33□□□□□ -0.6
NEB-213ENST00000484968 GAKO14976 1311 aa11.33□□□□□ -0.6
NEB-213ENST00000484968 MAST3O60307 1309 aa11.33□□□□□ -0.6
NEB-213ENST00000484968 CDC45O75419 566 aa11.32□□□□□ -0.6
NEB-213ENST00000484968 CYP7A1P22680 504 aa11.32□□□□□ -0.6
NEB-213ENST00000484968 EPS15P42566 896 aa11.32□□□□□ -0.6
NEB-213ENST00000484968 ZNF280AP59817 542 aaPredicted RBP11.32□□□□□ -0.6
NEB-213ENST00000484968 MAP3K12Q12852 859 aa11.32□□□□□ -0.6
NEB-213ENST00000484968 TNIP1Q15025 636 aa11.32□□□□□ -0.6
NEB-213ENST00000484968 NAA16Q6N069 864 aaPredicted RBP11.32□□□□□ -0.6
NEB-213ENST00000484968 GPC2Q8N158 579 aa11.32□□□□□ -0.6
NEB-213ENST00000484968 PRMT6Q96LA8 375 aaPredicted RBP11.32□□□□□ -0.6
NEB-213ENST00000484968 SUGT1Q9Y2Z0 365 aa11.32□□□□□ -0.6
NEB-213ENST00000484968 ASTN2O75129 1339 aaPredicted RBP11.32□□□□□ -0.6
NEB-213ENST00000484968 RFX7Q2KHR2 1363 aa11.31□□□□□ -0.6
NEB-213ENST00000484968 GPR75-ASB3A0A0A6YYF3 556 aa11.31□□□□□ -0.6
NEB-213ENST00000484968 SGSM2O43147 1006 aa11.31□□□□□ -0.6
NEB-213ENST00000484968 PRKAB2O43741 272 aa11.31□□□□□ -0.6
NEB-213ENST00000484968 USP17L8P0C7I0 530 aa11.31□□□□□ -0.6
NEB-213ENST00000484968 CRKP46108 304 aa11.31□□□□□ -0.6
NEB-213ENST00000484968 HIRAP54198 1017 aaPredicted RBP11.31□□□□□ -0.6
NEB-213ENST00000484968 RHBDL3P58872 404 aa11.31□□□□□ -0.6
NEB-213ENST00000484968 VPS53Q5VIR6 699 aa11.31□□□□□ -0.6
NEB-213ENST00000484968 SPTY2D1Q68D10 685 aaPredicted RBP11.31□□□□□ -0.6
NEB-213ENST00000484968 SAMD7Q7Z3H4 446 aa11.31□□□□□ -0.6
NEB-213ENST00000484968 DZIP1Q86YF9 867 aaKnown RBP11.31□□□□□ -0.6
NEB-213ENST00000484968 LCORLQ8N3X6 602 aa11.31□□□□□ -0.6
NEB-213ENST00000484968 ZGPATQ8N5A5 531 aaKnown RBP11.31□□□□□ -0.6
NEB-213ENST00000484968 APPBP2Q92624 585 aa11.31□□□□□ -0.6
NEB-213ENST00000484968 DPF2Q92785 391 aa11.31□□□□□ -0.6
NEB-213ENST00000484968 ESYT1Q9BSJ8 1104 aa11.31□□□□□ -0.6
NEB-213ENST00000484968 ARMT1Q9H993 441 aa11.31□□□□□ -0.6
NEB-213ENST00000484968 GPRC5DQ9NZD1 345 aa11.31□□□□□ -0.6
NEB-213ENST00000484968 CNOT7Q9UIV1 285 aaKnown RBP11.31□□□□□ -0.6
NEB-213ENST00000484968 MROH7-TTC4A0A0A0MT08 1334 aa11.31□□□□□ -0.6
NEB-213ENST00000484968 GLTPD2A6NH11 291 aa11.3□□□□□ -0.6
NEB-213ENST00000484968 SMIM22K7EJ46 135 aa11.3□□□□□ -0.6
NEB-213ENST00000484968 MBD4O95243 580 aa11.3□□□□□ -0.6
NEB-213ENST00000484968 RPS12P25398 132 aaKnown RBP11.3□□□□□ -0.6
NEB-213ENST00000484968 PPP4CP60510 307 aa11.3□□□□□ -0.6
NEB-213ENST00000484968 EVX2Q03828 476 aa11.3□□□□□ -0.6
NEB-213ENST00000484968 NBPF9Q3BBW0 867 aa11.3□□□□□ -0.6
NEB-213ENST00000484968 CFAP100Q494V2 611 aa11.3□□□□□ -0.6
NEB-213ENST00000484968 HHIPL2Q6UWX4 724 aa11.3□□□□□ -0.6
NEB-213ENST00000484968 MICALL2Q8IY33 904 aa11.3□□□□□ -0.6
NEB-213ENST00000484968 TRPM4Q8TD43 1214 aa11.3□□□□□ -0.6
NEB-213ENST00000484968 SH3RF3Q8TEJ3 882 aaPredicted RBP11.3□□□□□ -0.6
NEB-213ENST00000484968 STRBPQ96SI9 672 aaKnown RBP11.3□□□□□ -0.6
NEB-213ENST00000484968 MRIQ9BWK5 157 aa11.3□□□□□ -0.6
NEB-213ENST00000484968 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.3□□□□□ -0.6
NEB-213ENST00000484968 AATFQ9NY61 560 aaKnown RBP eCLIP11.3□□□□□ -0.6
NEB-213ENST00000484968 MYO3BQ8WXR4 1341 aa11.3□□□□□ -0.6
NEB-213ENST00000484968 MAST2Q6P0Q8 1798 aa11.29□□□□□ -0.6
NEB-213ENST00000484968 SPDYE2BA6NHP3 402 aa11.29□□□□□ -0.6
NEB-213ENST00000484968 GPAA1O43292 621 aa11.29□□□□□ -0.6
NEB-213ENST00000484968 ZFYP08048 801 aaPredicted RBP11.29□□□□□ -0.6
NEB-213ENST00000484968 SPDYE6P0CI01 402 aa11.29□□□□□ -0.6
NEB-213ENST00000484968 BTDP43251 543 aa11.29□□□□□ -0.6
NEB-213ENST00000484968 HDLBPQ00341 1268 aaKnown RBP11.29□□□□□ -0.6
NEB-213ENST00000484968 PTH1RQ03431 593 aa11.29□□□□□ -0.6
NEB-213ENST00000484968 CDC42EP5Q6NZY7 148 aa11.29□□□□□ -0.6
NEB-213ENST00000484968 TICAM2Q86XR7 235 aa11.29□□□□□ -0.6
NEB-213ENST00000484968 TEKT1Q969V4 418 aa11.29□□□□□ -0.6
NEB-213ENST00000484968 L3MBTL3Q96JM7 780 aaPredicted RBP11.29□□□□□ -0.6
NEB-213ENST00000484968 ZDHHC15Q96MV8 337 aa11.29□□□□□ -0.6
NEB-213ENST00000484968 MYOZ2Q9NPC6 264 aa11.29□□□□□ -0.6
NEB-213ENST00000484968 HELLSQ9NRZ9 838 aa11.29□□□□□ -0.6
NEB-213ENST00000484968 SERPINA10Q9UK55 444 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms