RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.03□□□□□ -0.16
SND1-210ENST00000483503 H3BQV1 296 aa14.03□□□□□ -0.16
SND1-210ENST00000483503 SNAP23O00161 211 aa14.03□□□□□ -0.16
SND1-210ENST00000483503 PDIA3P30101 505 aaKnown RBP14.03□□□□□ -0.16
SND1-210ENST00000483503 UBE2HP62256 183 aa14.03□□□□□ -0.16
SND1-210ENST00000483503 ST5P78524 1137 aa14.03□□□□□ -0.16
SND1-210ENST00000483503 SCRN1Q12765 414 aa14.03□□□□□ -0.16
SND1-210ENST00000483503 GRAPQ13588 217 aa14.03□□□□□ -0.16
SND1-210ENST00000483503 NFIXQ14938 502 aa14.03□□□□□ -0.16
SND1-210ENST00000483503 ZNF772Q68DY9 489 aaPredicted RBP14.03□□□□□ -0.16
SND1-210ENST00000483503 NAA16Q6N069 864 aaPredicted RBP14.03□□□□□ -0.16
SND1-210ENST00000483503 IFNL3Q8IZI9 196 aa14.03□□□□□ -0.16
SND1-210ENST00000483503 NSUN7Q8NE18 718 aaKnown RBP14.03□□□□□ -0.16
SND1-210ENST00000483503 GRAPLQ8TC17 118 aaPredicted RBP14.03□□□□□ -0.16
SND1-210ENST00000483503 TMEM87BQ96K49 555 aa14.03□□□□□ -0.16
SND1-210ENST00000483503 FAM84BQ96KN1 310 aaPredicted RBP14.03□□□□□ -0.16
SND1-210ENST00000483503 KRT23Q9C075 422 aa14.03□□□□□ -0.16
SND1-210ENST00000483503 GRPEL1Q9HAV7 217 aa14.03□□□□□ -0.16
SND1-210ENST00000483503 RAI14Q9P0K7 980 aa14.03□□□□□ -0.16
SND1-210ENST00000483503 LEMD3Q9Y2U8 911 aa14.03□□□□□ -0.16
SND1-210ENST00000483503 LETM1O95202 739 aaPredicted RBP14.02□□□□□ -0.17
SND1-210ENST00000483503 CYP7A1P22680 504 aa14.02□□□□□ -0.17
SND1-210ENST00000483503 HIBADHP31937 336 aaKnown RBP14.02□□□□□ -0.17
SND1-210ENST00000483503 GYG1P46976 350 aa14.02□□□□□ -0.17
SND1-210ENST00000483503 ZSCAN23Q3MJ62 389 aa14.02□□□□□ -0.17
SND1-210ENST00000483503 SPTY2D1Q68D10 685 aaPredicted RBP14.02□□□□□ -0.17
SND1-210ENST00000483503 SMIM5Q71RC9 77 aa14.02□□□□□ -0.17
SND1-210ENST00000483503 MTA3Q9BTC8 594 aa14.02□□□□□ -0.17
SND1-210ENST00000483503 SCAND2PQ9GZW5 306 aaPredicted RBP14.02□□□□□ -0.17
SND1-210ENST00000483503 RNF41Q9H4P4 317 aaPredicted RBP14.02□□□□□ -0.17
SND1-210ENST00000483503 LRRC4BQ9NT99 713 aa14.02□□□□□ -0.17
SND1-210ENST00000483503 NAP1L2Q9ULW6 460 aaPredicted RBP14.02□□□□□ -0.17
SND1-210ENST00000483503 MYO5AQ9Y4I1 1855 aaKnown RBP14.01□□□□□ -0.17
SND1-210ENST00000483503 MAGEB6P1A0A0J9YX57 407 aa14.01□□□□□ -0.17
SND1-210ENST00000483503 TM4SF1P30408 202 aa14.01□□□□□ -0.17
SND1-210ENST00000483503 TDO2P48775 406 aa14.01□□□□□ -0.17
SND1-210ENST00000483503 RBM6P78332 1123 aaKnown RBP14.01□□□□□ -0.17
SND1-210ENST00000483503 ATL3Q6DD88 541 aa14.01□□□□□ -0.17
SND1-210ENST00000483503 ARMT1Q9H993 441 aa14.01□□□□□ -0.17
SND1-210ENST00000483503 ABCF2Q9UG63 623 aa14.01□□□□□ -0.17
SND1-210ENST00000483503 CNPY2Q9Y2B0 182 aa14.01□□□□□ -0.17
SND1-210ENST00000483503 SLC4A4Q9Y6R1 1079 aa14.01□□□□□ -0.17
SND1-210ENST00000483503 UBR3Q6ZT12 1888 aa14.01□□□□□ -0.17
SND1-210ENST00000483503 ELP1O95163 1332 aa14□□□□□ -0.17
SND1-210ENST00000483503 A0A0G2JLW4 131 aa14□□□□□ -0.17
SND1-210ENST00000483503 KLF18A0A0U1RQI7 1052 aa14□□□□□ -0.17
SND1-210ENST00000483503 PTPDC1A2A3K4 754 aa14□□□□□ -0.17
SND1-210ENST00000483503 GSG1L2A8MUP6 293 aa14□□□□□ -0.17
SND1-210ENST00000483503 JAK2O60674 1132 aa14□□□□□ -0.17
SND1-210ENST00000483503 CDKL5O76039 1030 aa14□□□□□ -0.17
SND1-210ENST00000483503 XRCC6P12956 609 aaKnown RBP eCLIP14□□□□□ -0.17
SND1-210ENST00000483503 FOXD4L6Q3SYB3 417 aaPredicted RBP14□□□□□ -0.17
SND1-210ENST00000483503 GIMAP6Q6P9H5 292 aa14□□□□□ -0.17
SND1-210ENST00000483503 CPLX2Q6PUV4 134 aaKnown RBP14□□□□□ -0.17
SND1-210ENST00000483503 POTEAQ6S8J7 498 aa14□□□□□ -0.17
SND1-210ENST00000483503 FOXD4L3Q6VB84 417 aaPredicted RBP14□□□□□ -0.17
SND1-210ENST00000483503 CDC37L1Q7L3B6 337 aa14□□□□□ -0.17
SND1-210ENST00000483503 ANP32BQ92688 251 aaKnown RBP14□□□□□ -0.17
SND1-210ENST00000483503 RPGRQ92834 1020 aaKnown RBP14□□□□□ -0.17
SND1-210ENST00000483503 RBM17Q96I25 401 aaKnown RBP14□□□□□ -0.17
SND1-210ENST00000483503 ANGEL1Q9UNK9 670 aaKnown RBP14□□□□□ -0.17
SND1-210ENST00000483503 XDHP47989 1333 aa13.99□□□□□ -0.17
SND1-210ENST00000483503 GOLGA8BA8MQT2 603 aa13.99□□□□□ -0.17
SND1-210ENST00000483503 CPLX1O14810 134 aa13.99□□□□□ -0.17
SND1-210ENST00000483503 FIBPO43427 364 aa13.99□□□□□ -0.17
SND1-210ENST00000483503 GYS1P13807 737 aa13.99□□□□□ -0.17
SND1-210ENST00000483503 ANTXR2P58335 489 aa13.99□□□□□ -0.17
SND1-210ENST00000483503 CCT2P78371 535 aaKnown RBP13.99□□□□□ -0.17
SND1-210ENST00000483503 DNM1Q05193 864 aaKnown RBP13.99□□□□□ -0.17
SND1-210ENST00000483503 SART3Q15020 963 aaKnown RBP13.99□□□□□ -0.17
SND1-210ENST00000483503 AKNAD1Q5T1N1 836 aa13.99□□□□□ -0.17
SND1-210ENST00000483503 PRR5LQ6MZQ0 368 aa13.99□□□□□ -0.17
SND1-210ENST00000483503 LRSAM1Q6UWE0 723 aa13.99□□□□□ -0.17
SND1-210ENST00000483503 MFSD6Q6ZSS7 791 aa13.99□□□□□ -0.17
SND1-210ENST00000483503 C15orf52Q6ZUT6 534 aaKnown RBP13.99□□□□□ -0.17
SND1-210ENST00000483503 TMC4Q7Z404 712 aa13.99□□□□□ -0.17
SND1-210ENST00000483503 AMIGO3Q86WK7 504 aa13.99□□□□□ -0.17
SND1-210ENST00000483503 TBC1D10CQ8IV04 446 aa13.99□□□□□ -0.17
SND1-210ENST00000483503 STAG1Q8WVM7 1258 aa13.99□□□□□ -0.17
SND1-210ENST00000483503 TIAM2Q8IVF5 1701 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 COL4A1P02462 1669 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 SALL1Q9NSC2 1324 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 SH2B2O14492 632 aaPredicted RBP13.98□□□□□ -0.17
SND1-210ENST00000483503 TRIM37O94972 964 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 SERPINB2P05120 415 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 PCP11498 1178 aaKnown RBP13.98□□□□□ -0.17
SND1-210ENST00000483503 LIFRP42702 1097 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 CCDC183Q5T5S1 534 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 SYNE3Q6ZMZ3 975 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 CHST3Q7LGC8 479 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 TMTC2Q8N394 836 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 LCORLQ8N3X6 602 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 FLAD1Q8NFF5 587 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 DDX11Q96FC9 970 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 CHAMP1Q96JM3 812 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 NBPF3Q9H094 633 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 GDPD2Q9HCC8 539 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 EPB41L4AQ9HCS5 686 aaPredicted RBP13.98□□□□□ -0.17
SND1-210ENST00000483503 TMEM63CQ9P1W3 806 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 ANAPC4Q9UJX5 808 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms