RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 SLC5A1P13866 664 aa14□□□□□ -0.17
RAPGEF3-210ENST00000482843 ZNF165P49910 485 aa14□□□□□ -0.17
RAPGEF3-210ENST00000482843 BCAMP50895 628 aa14□□□□□ -0.17
RAPGEF3-210ENST00000482843 SUSD4Q5VX71 490 aa14□□□□□ -0.17
RAPGEF3-210ENST00000482843 EGFL6Q8IUX8 553 aa14□□□□□ -0.17
RAPGEF3-210ENST00000482843 PHKBQ93100 1093 aa14□□□□□ -0.17
RAPGEF3-210ENST00000482843 KCNQ2O43526 872 aa13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 MBD4O95243 580 aa13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 ADD1P35611 737 aaKnown RBP13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 CRKLP46109 303 aaKnown RBP13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 CTDSPL2Q05D32 466 aa13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 CPLX2Q6PUV4 134 aaKnown RBP13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 UTP14AQ9BVJ6 771 aaKnown RBP13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 ZSCAN16Q9H4T2 348 aaPredicted RBP13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 KIF1AQ12756 1690 aa13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 MARCKSP29966 332 aaPredicted RBP13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 MAP3K12Q12852 859 aa13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 TSGA10IPQ3SY00 556 aa13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 CC2D2BQ6DHV5 1058 aa13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 PGBD1Q96JS3 809 aa13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 A0A1B0GVL5 298 aa13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 IFIT3O14879 490 aaKnown RBP13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 ARID4AP29374 1257 aaPredicted RBP13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 FAM98CQ17RN3 349 aaKnown RBP13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 ARMCX6Q7L4S7 300 aa13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 AIFM3Q96NN9 605 aa13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 RIPOR2Q9Y4F9 1068 aa13.99□□□□□ -0.17
RAPGEF3-210ENST00000482843 TMEM67Q5HYA8 995 aa13.98□□□□□ -0.17
RAPGEF3-210ENST00000482843 PIBF1Q8WXW3 757 aa13.98□□□□□ -0.17
RAPGEF3-210ENST00000482843 PDLIM2Q96JY6 352 aa13.98□□□□□ -0.17
RAPGEF3-210ENST00000482843 CCDC87Q9NVE4 849 aa13.98□□□□□ -0.17
RAPGEF3-210ENST00000482843 MTMR7Q9Y216 660 aa13.98□□□□□ -0.17
RAPGEF3-210ENST00000482843 LOC102724428A0A0B4J2F2 783 aa13.98□□□□□ -0.17
RAPGEF3-210ENST00000482843 PDE6AP16499 860 aa13.98□□□□□ -0.17
RAPGEF3-210ENST00000482843 METAP2P50579 478 aaKnown RBP eCLIP13.98□□□□□ -0.17
RAPGEF3-210ENST00000482843 SIK1P57059 783 aa13.98□□□□□ -0.17
RAPGEF3-210ENST00000482843 TRIM29Q14134 588 aa13.98□□□□□ -0.17
RAPGEF3-210ENST00000482843 DDX19AQ9NUU7 478 aaKnown RBP13.98□□□□□ -0.17
RAPGEF3-210ENST00000482843 TRPM3Q9HCF6 1732 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF3-210ENST00000482843 CTDNEP1O95476 244 aa13.97□□□□□ -0.17
RAPGEF3-210ENST00000482843 RESTQ13127 1097 aa13.97□□□□□ -0.17
RAPGEF3-210ENST00000482843 PUM3Q15397 648 aaKnown RBP13.97□□□□□ -0.17
RAPGEF3-210ENST00000482843 CMTR1Q8N1G2 835 aaKnown RBP13.97□□□□□ -0.17
RAPGEF3-210ENST00000482843 TMTC2Q8N394 836 aa13.97□□□□□ -0.17
RAPGEF3-210ENST00000482843 NGLY1Q96IV0 654 aa13.97□□□□□ -0.17
RAPGEF3-210ENST00000482843 C8orf37Q96NL8 207 aa13.97□□□□□ -0.17
RAPGEF3-210ENST00000482843 LMTK3Q96Q04 1460 aa13.97□□□□□ -0.17
RAPGEF3-210ENST00000482843 GOLGA6L6A8MZA4 724 aa13.97□□□□□ -0.17
RAPGEF3-210ENST00000482843 CHAF1AQ13111 956 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF3-210ENST00000482843 TTF1Q15361 905 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF3-210ENST00000482843 BANK1Q8NDB2 785 aa13.97□□□□□ -0.17
RAPGEF3-210ENST00000482843 FAM200AQ8TCP9 573 aa13.97□□□□□ -0.17
RAPGEF3-210ENST00000482843 PRKAB2O43741 272 aa13.97□□□□□ -0.17
RAPGEF3-210ENST00000482843 SPATA5Q8NB90 893 aa13.97□□□□□ -0.17
RAPGEF3-210ENST00000482843 PIK3R5Q8WYR1 880 aa13.97□□□□□ -0.17
RAPGEF3-210ENST00000482843 UBN2Q6ZU65 1347 aa13.96□□□□□ -0.17
RAPGEF3-210ENST00000482843 CCDC69A6NI79 296 aa13.96□□□□□ -0.17
RAPGEF3-210ENST00000482843 SLC4A4Q9Y6R1 1079 aa13.96□□□□□ -0.17
RAPGEF3-210ENST00000482843 C5P01031 1676 aa13.96□□□□□ -0.17
RAPGEF3-210ENST00000482843 CSF1RP07333 972 aa13.96□□□□□ -0.17
RAPGEF3-210ENST00000482843 TRIM28Q13263 835 aaKnown RBP13.96□□□□□ -0.17
RAPGEF3-210ENST00000482843 CCDC152Q4G0S7 254 aa13.96□□□□□ -0.17
RAPGEF3-210ENST00000482843 FILIP1Q7Z7B0 1213 aa13.96□□□□□ -0.17
RAPGEF3-210ENST00000482843 CBX8Q9HC52 389 aa13.96□□□□□ -0.17
RAPGEF3-210ENST00000482843 CGNQ9P2M7 1197 aaKnown RBP13.96□□□□□ -0.17
RAPGEF3-210ENST00000482843 EXOSC10Q01780 885 aaKnown RBP13.96□□□□□ -0.18
RAPGEF3-210ENST00000482843 UVSSAQ2YD98 709 aa13.96□□□□□ -0.18
RAPGEF3-210ENST00000482843 LPIN2Q92539 896 aa13.96□□□□□ -0.18
RAPGEF3-210ENST00000482843 ALG1Q9BT22 464 aa13.96□□□□□ -0.18
RAPGEF3-210ENST00000482843 ERICH2A1L162 156 aa13.95□□□□□ -0.18
RAPGEF3-210ENST00000482843 GOLGA8AA7E2F4 631 aa13.95□□□□□ -0.18
RAPGEF3-210ENST00000482843 IL6STP40189 918 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF3-210ENST00000482843 GYG1P46976 350 aa13.95□□□□□ -0.18
RAPGEF3-210ENST00000482843 RASGRF1Q13972 1273 aa13.95□□□□□ -0.18
RAPGEF3-210ENST00000482843 LLPHQ9BRT6 129 aaKnown RBP13.95□□□□□ -0.18
RAPGEF3-210ENST00000482843 SLC26A6Q9BXS9 759 aa13.95□□□□□ -0.18
RAPGEF3-210ENST00000482843 PALLDQ8WX93 1383 aa13.95□□□□□ -0.18
RAPGEF3-210ENST00000482843 UQCRFS1P1P0C7P4 283 aa13.95□□□□□ -0.18
RAPGEF3-210ENST00000482843 ADD2P35612 726 aa13.95□□□□□ -0.18
RAPGEF3-210ENST00000482843 ZNF513Q8N8E2 541 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF3-210ENST00000482843 SLC12A7Q9Y666 1083 aa13.95□□□□□ -0.18
RAPGEF3-210ENST00000482843 MRVI1Q9Y6F6 885 aa13.95□□□□□ -0.18
RAPGEF3-210ENST00000482843 OFD1O75665 1012 aa13.94□□□□□ -0.18
RAPGEF3-210ENST00000482843 CYP7A1P22680 504 aa13.94□□□□□ -0.18
RAPGEF3-210ENST00000482843 TBC1D10CQ8IV04 446 aa13.94□□□□□ -0.18
RAPGEF3-210ENST00000482843 UQCRHLA0A096LP55 91 aa13.94□□□□□ -0.18
RAPGEF3-210ENST00000482843 WTIPA6NIX2 430 aaPredicted RBP13.94□□□□□ -0.18
RAPGEF3-210ENST00000482843 UQCRHP07919 91 aa13.94□□□□□ -0.18
RAPGEF3-210ENST00000482843 PTGS1P23219 599 aa13.94□□□□□ -0.18
RAPGEF3-210ENST00000482843 NACAP1Q9BZK3 213 aa13.94□□□□□ -0.18
RAPGEF3-210ENST00000482843 CLSTN2Q9H4D0 955 aa13.94□□□□□ -0.18
RAPGEF3-210ENST00000482843 SENP2Q9HC62 589 aa13.94□□□□□ -0.18
RAPGEF3-210ENST00000482843 ZBTB43O43298 467 aa13.94□□□□□ -0.18
RAPGEF3-210ENST00000482843 PRDM1O75626 825 aa13.94□□□□□ -0.18
RAPGEF3-210ENST00000482843 SDR42E1Q8WUS8 393 aa13.94□□□□□ -0.18
RAPGEF3-210ENST00000482843 ZNF274Q96GC6 653 aaPredicted RBP13.94□□□□□ -0.18
RAPGEF3-210ENST00000482843 CLIC4Q9Y696 253 aa13.94□□□□□ -0.18
RAPGEF3-210ENST00000482843 IARSP41252 1262 aaKnown RBP13.93□□□□□ -0.18
RAPGEF3-210ENST00000482843 HS1BP3Q53T59 392 aa13.93□□□□□ -0.18
RAPGEF3-210ENST00000482843 MFSD6Q6ZSS7 791 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms