RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 TMEM39BQ9GZU3 492 aa16.25■□□□□ 0.19
TMEM54-206ENST00000482771 C9orf78Q9NZ63 289 aaPredicted RBP16.25■□□□□ 0.19
TMEM54-206ENST00000482771 CEP290O15078 2479 aa16.24■□□□□ 0.19
TMEM54-206ENST00000482771 HTTP42858 3142 aa16.24■□□□□ 0.19
TMEM54-206ENST00000482771 CCL15-CCL14A0A0B4J2E2 113 aa16.24■□□□□ 0.19
TMEM54-206ENST00000482771 GRM8O00222 908 aa16.24■□□□□ 0.19
TMEM54-206ENST00000482771 CRKP46108 304 aa16.24■□□□□ 0.19
TMEM54-206ENST00000482771 TAF1CQ15572 869 aaPredicted RBP16.24■□□□□ 0.19
TMEM54-206ENST00000482771 CCL15Q16663 113 aa16.24■□□□□ 0.19
TMEM54-206ENST00000482771 NBPF11Q86T75 865 aa16.24■□□□□ 0.19
TMEM54-206ENST00000482771 PUS3Q9BZE2 481 aaKnown RBP16.24■□□□□ 0.19
TMEM54-206ENST00000482771 CENPFP49454 3210 aa16.23■□□□□ 0.19
TMEM54-206ENST00000482771 TNNI2P48788 182 aa16.23■□□□□ 0.19
TMEM54-206ENST00000482771 VGLL4Q14135 290 aa16.23■□□□□ 0.19
TMEM54-206ENST00000482771 SLC4A8Q2Y0W8 1093 aa16.23■□□□□ 0.19
TMEM54-206ENST00000482771 FAM43AQ8N2R8 423 aa16.23■□□□□ 0.19
TMEM54-206ENST00000482771 ZNF333Q96JL9 665 aa16.23■□□□□ 0.19
TMEM54-206ENST00000482771 PTCH2Q9Y6C5 1203 aa16.23■□□□□ 0.19
TMEM54-206ENST00000482771 MYCP01106 439 aaPredicted RBP16.22■□□□□ 0.19
TMEM54-206ENST00000482771 GRIK5Q16478 980 aa16.22■□□□□ 0.19
TMEM54-206ENST00000482771 SLC9C1Q4G0N8 1177 aa16.22■□□□□ 0.19
TMEM54-206ENST00000482771 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
TMEM54-206ENST00000482771 WDR63Q8IWG1 891 aa16.22■□□□□ 0.19
TMEM54-206ENST00000482771 OTUD5Q96G74 571 aa16.22■□□□□ 0.19
TMEM54-206ENST00000482771 IQSEC3Q9UPP2 1182 aaPredicted RBP16.22■□□□□ 0.19
TMEM54-206ENST00000482771 CSADQ9Y600 493 aa16.22■□□□□ 0.19
TMEM54-206ENST00000482771 SLC4A10Q6U841 1118 aa16.21■□□□□ 0.19
TMEM54-206ENST00000482771 FBXO33Q7Z6M2 555 aa16.21■□□□□ 0.19
TMEM54-206ENST00000482771 VPS37DQ86XT2 251 aa16.21■□□□□ 0.19
TMEM54-206ENST00000482771 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.21■□□□□ 0.19
TMEM54-206ENST00000482771 RIPOR2Q9Y4F9 1068 aa16.21■□□□□ 0.19
TMEM54-206ENST00000482771 FRAT2O75474 233 aaPredicted RBP16.2■□□□□ 0.18
TMEM54-206ENST00000482771 WDHD1O75717 1129 aaPredicted RBP16.2■□□□□ 0.18
TMEM54-206ENST00000482771 CACNB3P54284 484 aa16.2■□□□□ 0.18
TMEM54-206ENST00000482771 CHAF1AQ13111 956 aaPredicted RBP16.2■□□□□ 0.18
TMEM54-206ENST00000482771 ALDH1L1O75891 902 aa16.19■□□□□ 0.18
TMEM54-206ENST00000482771 CETPP11597 493 aa16.19■□□□□ 0.18
TMEM54-206ENST00000482771 KAZALD1Q96I82 304 aa16.19■□□□□ 0.18
TMEM54-206ENST00000482771 SUCLG2Q96I99 432 aa16.19■□□□□ 0.18
TMEM54-206ENST00000482771 SRCIN1Q9C0H9 1055 aa16.19■□□□□ 0.18
TMEM54-206ENST00000482771 COLQQ9Y215 455 aaPredicted RBP16.19■□□□□ 0.18
TMEM54-206ENST00000482771 SPDYE5A6NIY4 337 aa16.18■□□□□ 0.18
TMEM54-206ENST00000482771 TLR2O60603 784 aa16.18■□□□□ 0.18
TMEM54-206ENST00000482771 FXR1P51114 621 aaKnown RBP eCLIP16.18■□□□□ 0.18
TMEM54-206ENST00000482771 HDLBPQ00341 1268 aaKnown RBP16.18■□□□□ 0.18
TMEM54-206ENST00000482771 KIF22Q14807 665 aa16.18■□□□□ 0.18
TMEM54-206ENST00000482771 ERO1BQ86YB8 467 aa16.18■□□□□ 0.18
TMEM54-206ENST00000482771 SH3TC2Q8TF17 1288 aa16.18■□□□□ 0.18
TMEM54-206ENST00000482771 ZKSCAN4Q969J2 545 aaPredicted RBP16.18■□□□□ 0.18
TMEM54-206ENST00000482771 ARHGAP39Q9C0H5 1083 aa16.18■□□□□ 0.18
TMEM54-206ENST00000482771 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
TMEM54-206ENST00000482771 MROH5Q6ZUA9 1318 aa16.18■□□□□ 0.18
TMEM54-206ENST00000482771 BTBD19C9JJ37 291 aa16.17■□□□□ 0.18
TMEM54-206ENST00000482771 IRF6O14896 467 aa16.17■□□□□ 0.18
TMEM54-206ENST00000482771 ECM2O94769 699 aaPredicted RBP16.17■□□□□ 0.18
TMEM54-206ENST00000482771 NBPF7P0C2Y1 421 aaPredicted RBP16.17■□□□□ 0.18
TMEM54-206ENST00000482771 LRRC24Q50LG9 513 aa16.17■□□□□ 0.18
TMEM54-206ENST00000482771 CAVIN4Q5BKX8 364 aa16.17■□□□□ 0.18
TMEM54-206ENST00000482771 TBC1D22AQ8WUA7 517 aa16.17■□□□□ 0.18
TMEM54-206ENST00000482771 TEKT1Q969V4 418 aa16.17■□□□□ 0.18
TMEM54-206ENST00000482771 WRNIP1Q96S55 665 aa16.17■□□□□ 0.18
TMEM54-206ENST00000482771 MRIQ9BWK5 157 aa16.17■□□□□ 0.18
TMEM54-206ENST00000482771 SNCAIPQ9Y6H5 919 aa16.17■□□□□ 0.18
TMEM54-206ENST00000482771 TRIOBPQ9H2D6 2365 aa16.17■□□□□ 0.18
TMEM54-206ENST00000482771 ECM29Q5VYK3 1845 aa16.17■□□□□ 0.18
TMEM54-206ENST00000482771 CACNA1FO60840 1977 aa16.17■□□□□ 0.18
TMEM54-206ENST00000482771 BRCA2P51587 3418 aa16.16■□□□□ 0.18
TMEM54-206ENST00000482771 BCAMP50895 628 aa16.16■□□□□ 0.18
TMEM54-206ENST00000482771 LACTBP83111 547 aaPredicted RBP16.16■□□□□ 0.18
TMEM54-206ENST00000482771 SNAPC2Q13487 334 aa16.16■□□□□ 0.18
TMEM54-206ENST00000482771 METTL24Q5JXM2 366 aa16.16■□□□□ 0.18
TMEM54-206ENST00000482771 MRS2Q9HD23 443 aa16.16■□□□□ 0.18
TMEM54-206ENST00000482771 H0YGN5 161 aa16.15■□□□□ 0.18
TMEM54-206ENST00000482771 APOBEC3HQ6NTF7 200 aaKnown RBP16.15■□□□□ 0.18
TMEM54-206ENST00000482771 MIGA2Q7L4E1 593 aa16.15■□□□□ 0.18
TMEM54-206ENST00000482771 HOOK2Q96ED9 719 aa16.15■□□□□ 0.18
TMEM54-206ENST00000482771 ZDHHC15Q96MV8 337 aa16.15■□□□□ 0.18
TMEM54-206ENST00000482771 TMOD2Q9NZR1 351 aa16.15■□□□□ 0.18
TMEM54-206ENST00000482771 PDE8BO95263 885 aa16.14■□□□□ 0.17
TMEM54-206ENST00000482771 GNRH1P01148 92 aa16.14■□□□□ 0.17
TMEM54-206ENST00000482771 PPIL2Q13356 520 aa16.14■□□□□ 0.17
TMEM54-206ENST00000482771 FAM83AQ86UY5 434 aa16.14■□□□□ 0.17
TMEM54-206ENST00000482771 BICC1Q9H694 974 aaKnown RBP16.14■□□□□ 0.17
TMEM54-206ENST00000482771 ZCCHC17Q9NP64 241 aaKnown RBP16.14■□□□□ 0.17
TMEM54-206ENST00000482771 FKBP1CQ5VVH2 108 aa16.13■□□□□ 0.17
TMEM54-206ENST00000482771 DCAF15Q66K64 600 aa16.13■□□□□ 0.17
TMEM54-206ENST00000482771 C17orf99Q6UX52 265 aa16.13■□□□□ 0.17
TMEM54-206ENST00000482771 CPA4Q9UI42 421 aa16.13■□□□□ 0.17
TMEM54-206ENST00000482771 PSMC4P43686 418 aa16.12■□□□□ 0.17
TMEM54-206ENST00000482771 PRMT2P55345 433 aa16.12■□□□□ 0.17
TMEM54-206ENST00000482771 PPATQ06203 517 aa16.12■□□□□ 0.17
TMEM54-206ENST00000482771 MTFR1Q15390 333 aa16.12■□□□□ 0.17
TMEM54-206ENST00000482771 HHIPL2Q6UWX4 724 aa16.12■□□□□ 0.17
TMEM54-206ENST00000482771 ANKRD44Q8N8A2 993 aa16.12■□□□□ 0.17
TMEM54-206ENST00000482771 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.12■□□□□ 0.17
TMEM54-206ENST00000482771 KLHDC4Q8TBB5 520 aa16.12■□□□□ 0.17
TMEM54-206ENST00000482771 DPF3Q92784 378 aa16.12■□□□□ 0.17
TMEM54-206ENST00000482771 ZNF341Q9BYN7 854 aa16.12■□□□□ 0.17
TMEM54-206ENST00000482771 LAMB1P07942 1786 aa16.12■□□□□ 0.17
TMEM54-206ENST00000482771 UTYO14607 1347 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms