RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 MRIQ9BWK5 157 aa22.6■■□□□ 1.21
SMIM4-204ENST00000482728 CLRN2A0PK11 232 aa22.59■■□□□ 1.21
SMIM4-204ENST00000482728 UQCRFS1P1P0C7P4 283 aa22.59■■□□□ 1.21
SMIM4-204ENST00000482728 VEZTQ9HBM0 779 aa22.59■■□□□ 1.21
SMIM4-204ENST00000482728 RASSF10A6NK89 507 aa22.58■■□□□ 1.21
SMIM4-204ENST00000482728 APBB1O00213 710 aa22.58■■□□□ 1.21
SMIM4-204ENST00000482728 TTC39AQ5SRH9 613 aa22.58■■□□□ 1.21
SMIM4-204ENST00000482728 SPTY2D1Q68D10 685 aaPredicted RBP22.58■■□□□ 1.21
SMIM4-204ENST00000482728 PAXIP1Q6ZW49 1069 aaPredicted RBP22.58■■□□□ 1.21
SMIM4-204ENST00000482728 DBNDD2Q9BQY9 259 aa22.58■■□□□ 1.21
SMIM4-204ENST00000482728 GBA2Q9HCG7 927 aaPredicted RBP22.58■■□□□ 1.21
SMIM4-204ENST00000482728 ABCF2Q9UG63 623 aa22.58■■□□□ 1.21
SMIM4-204ENST00000482728 TLL2Q9Y6L7 1015 aa22.58■■□□□ 1.21
SMIM4-204ENST00000482728 MYH13Q9UKX3 1938 aa22.58■■□□□ 1.21
SMIM4-204ENST00000482728 SALL1Q9NSC2 1324 aa22.57■■□□□ 1.2
SMIM4-204ENST00000482728 RAB11FIP3O75154 756 aa22.57■■□□□ 1.2
SMIM4-204ENST00000482728 PRAMEF18Q5VWM3 479 aa22.57■■□□□ 1.2
SMIM4-204ENST00000482728 CCDC8Q9H0W5 538 aaPredicted RBP22.57■■□□□ 1.2
SMIM4-204ENST00000482728 TDRD3Q9H7E2 651 aaKnown RBP22.57■■□□□ 1.2
SMIM4-204ENST00000482728 CNTNAP1P78357 1384 aa22.57■■□□□ 1.2
SMIM4-204ENST00000482728 PDS5AQ29RF7 1337 aaKnown RBP22.57■■□□□ 1.2
SMIM4-204ENST00000482728 NF2P35240 595 aa22.56■■□□□ 1.2
SMIM4-204ENST00000482728 HHIPL2Q6UWX4 724 aa22.56■■□□□ 1.2
SMIM4-204ENST00000482728 SAPCD2Q86UD0 394 aa22.56■■□□□ 1.2
SMIM4-204ENST00000482728 SPATA5Q8NB90 893 aa22.56■■□□□ 1.2
SMIM4-204ENST00000482728 RHPN1Q8TCX5 695 aa22.56■■□□□ 1.2
SMIM4-204ENST00000482728 EAF2Q96CJ1 260 aaPredicted RBP22.56■■□□□ 1.2
SMIM4-204ENST00000482728 KIF1BPQ96EK5 621 aa22.56■■□□□ 1.2
SMIM4-204ENST00000482728 DEFB129Q9H1M3 183 aa22.56■■□□□ 1.2
SMIM4-204ENST00000482728 HMG20BQ9P0W2 317 aa22.56■■□□□ 1.2
SMIM4-204ENST00000482728 ZNF70Q9UC06 446 aaPredicted RBP22.56■■□□□ 1.2
SMIM4-204ENST00000482728 COL1A1P02452 1464 aaPredicted RBP22.55■■□□□ 1.2
SMIM4-204ENST00000482728 ARAP2Q8WZ64 1704 aa22.55■■□□□ 1.2
SMIM4-204ENST00000482728 ARID4AP29374 1257 aaPredicted RBP22.55■■□□□ 1.2
SMIM4-204ENST00000482728 PRDX5P30044 214 aa22.55■■□□□ 1.2
SMIM4-204ENST00000482728 SPDYE2Q495Y8 402 aa22.55■■□□□ 1.2
SMIM4-204ENST00000482728 AACSQ86V21 672 aa22.55■■□□□ 1.2
SMIM4-204ENST00000482728 ZDHHC15Q96MV8 337 aa22.55■■□□□ 1.2
SMIM4-204ENST00000482728 BCL11AQ9H165 835 aa22.55■■□□□ 1.2
SMIM4-204ENST00000482728 IL1RAPL2Q9NP60 686 aa22.55■■□□□ 1.2
SMIM4-204ENST00000482728 ECE1P42892 770 aa22.54■■□□□ 1.2
SMIM4-204ENST00000482728 VEGFBP49765 207 aa22.54■■□□□ 1.2
SMIM4-204ENST00000482728 HUNKP57058 714 aa22.54■■□□□ 1.2
SMIM4-204ENST00000482728 TNFAIP1Q13829 316 aa22.54■■□□□ 1.2
SMIM4-204ENST00000482728 CLASRPQ8N2M8 674 aaKnown RBP22.54■■□□□ 1.2
SMIM4-204ENST00000482728 DBNLQ9UJU6 430 aaKnown RBP22.54■■□□□ 1.2
SMIM4-204ENST00000482728 GRM1Q13255 1194 aa22.53■■□□□ 1.2
SMIM4-204ENST00000482728 TTLL12Q14166 644 aaPredicted RBP22.53■■□□□ 1.2
SMIM4-204ENST00000482728 DIXDC1Q155Q3 683 aa22.53■■□□□ 1.2
SMIM4-204ENST00000482728 ERICH6Q7L0X2 663 aa22.53■■□□□ 1.2
SMIM4-204ENST00000482728 DZIP1Q86YF9 867 aaKnown RBP22.53■■□□□ 1.2
SMIM4-204ENST00000482728 SLF2Q8IX21 1173 aa22.53■■□□□ 1.2
SMIM4-204ENST00000482728 JMYQ8N9B5 988 aa22.53■■□□□ 1.2
SMIM4-204ENST00000482728 CRBNQ96SW2 442 aa22.53■■□□□ 1.2
SMIM4-204ENST00000482728 TMOD2Q9NZR1 351 aa22.53■■□□□ 1.2
SMIM4-204ENST00000482728 PPP2R3BQ9Y5P8 575 aa22.53■■□□□ 1.2
SMIM4-204ENST00000482728 AOX1Q06278 1338 aa22.53■■□□□ 1.2
SMIM4-204ENST00000482728 MCAMP43121 646 aa22.52■■□□□ 1.2
SMIM4-204ENST00000482728 TNNI2P48788 182 aa22.52■■□□□ 1.2
SMIM4-204ENST00000482728 FKBP1BP68106 108 aa22.52■■□□□ 1.2
SMIM4-204ENST00000482728 APOBEC3HQ6NTF7 200 aaKnown RBP22.52■■□□□ 1.2
SMIM4-204ENST00000482728 PI16Q6UXB8 463 aa22.52■■□□□ 1.2
SMIM4-204ENST00000482728 HHIPL1Q96JK4 782 aa22.52■■□□□ 1.2
SMIM4-204ENST00000482728 ZNF512BQ96KM6 892 aaPredicted RBP22.52■■□□□ 1.2
SMIM4-204ENST00000482728 CAPNS2Q96L46 248 aa22.52■■□□□ 1.2
SMIM4-204ENST00000482728 SNRKQ9NRH2 765 aa22.52■■□□□ 1.2
SMIM4-204ENST00000482728 RASA3Q14644 834 aa22.51■■□□□ 1.19
SMIM4-204ENST00000482728 SUPT20HL1Q3ZLR7 823 aa22.51■■□□□ 1.19
SMIM4-204ENST00000482728 TBC1D9Q6ZT07 1266 aa22.51■■□□□ 1.19
SMIM4-204ENST00000482728 TLR7Q9NYK1 1049 aaKnown RBP22.51■■□□□ 1.19
SMIM4-204ENST00000482728 LRP2BPQ9P2M1 347 aa22.51■■□□□ 1.19
SMIM4-204ENST00000482728 WDR33Q9C0J8 1336 aaKnown RBP22.51■■□□□ 1.19
SMIM4-204ENST00000482728 TCP10L2B9ZVM9 353 aa22.5■■□□□ 1.19
SMIM4-204ENST00000482728 IFIT2P09913 472 aaKnown RBP22.5■■□□□ 1.19
SMIM4-204ENST00000482728 CYP4F22Q6NT55 531 aa22.5■■□□□ 1.19
SMIM4-204ENST00000482728 RAI14Q9P0K7 980 aa22.5■■□□□ 1.19
SMIM4-204ENST00000482728 DAGLAQ9Y4D2 1042 aa22.5■■□□□ 1.19
SMIM4-204ENST00000482728 PCDHB15Q9Y5E8 787 aa22.49■■□□□ 1.19
SMIM4-204ENST00000482728 ECM29Q5VYK3 1845 aa22.48■■□□□ 1.19
SMIM4-204ENST00000482728 GSTO1P78417 241 aa22.48■■□□□ 1.19
SMIM4-204ENST00000482728 ARMC9Q7Z3E5 817 aa22.48■■□□□ 1.19
SMIM4-204ENST00000482728 LRRCC1Q9C099 1032 aa22.48■■□□□ 1.19
SMIM4-204ENST00000482728 SUPT16HQ9Y5B9 1047 aaKnown RBP22.48■■□□□ 1.19
SMIM4-204ENST00000482728 UBE2Q2LH0YL09 131 aa22.47■■□□□ 1.19
SMIM4-204ENST00000482728 PPP1R12BO60237 982 aaPredicted RBP22.47■■□□□ 1.19
SMIM4-204ENST00000482728 LDHCP07864 332 aa22.47■■□□□ 1.19
SMIM4-204ENST00000482728 ZNF157P51786 506 aaPredicted RBP22.47■■□□□ 1.19
SMIM4-204ENST00000482728 CACNB3P54284 484 aa22.47■■□□□ 1.19
SMIM4-204ENST00000482728 MECOMQ03112 1051 aa22.47■■□□□ 1.19
SMIM4-204ENST00000482728 PRKG1Q13976 671 aa22.47■■□□□ 1.19
SMIM4-204ENST00000482728 FKBP1CQ5VVH2 108 aa22.47■■□□□ 1.19
SMIM4-204ENST00000482728 RGMBQ6NW40 437 aa22.47■■□□□ 1.19
SMIM4-204ENST00000482728 DCTPP1Q9H773 170 aa22.47■■□□□ 1.19
SMIM4-204ENST00000482728 USP40Q9NVE5 1235 aa22.47■■□□□ 1.19
SMIM4-204ENST00000482728 NBPF12Q5TAG4 269 aaPredicted RBP22.46■■□□□ 1.19
SMIM4-204ENST00000482728 CDC42EP5Q6NZY7 148 aa22.46■■□□□ 1.19
SMIM4-204ENST00000482728 MOB2Q70IA6 237 aa22.46■■□□□ 1.19
SMIM4-204ENST00000482728 CCDC102AQ96A19 550 aa22.46■■□□□ 1.19
SMIM4-204ENST00000482728 ZAP70P43403 619 aa22.45■■□□□ 1.18
SMIM4-204ENST00000482728 AAMPQ13685 434 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms